CNRS Nantes University US2B US2B
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***  bacteriorhodopsin  ***

<R2> analysis for 2404222055381936730

---  normal mode 10  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0780
ILE 40.0213
THR 50.0224
GLY 60.0187
ARG 70.0151
PRO 80.0160
GLU 90.0135
TRP 100.0170
ILE 110.0194
TRP 120.0155
LEU 130.0143
ALA 140.0179
LEU 150.0168
GLY 160.0130
THR 170.0144
ALA 180.0138
LEU 190.0108
MET 200.0083
GLY 210.0091
LEU 220.0047
GLY 230.0022
THR 240.0025
LEU 250.0051
TYR 260.0123
PHE 270.0118
LEU 280.0169
VAL 290.0222
LYS 300.0240
GLY 310.0243
MET 320.0354
GLY 330.0424
VAL 340.0346
SER 350.0379
ASP 360.0314
PRO 370.0289
ASP 380.0214
ALA 390.0211
LYS 400.0237
LYS 410.0181
PHE 420.0115
TYR 430.0147
ALA 440.0138
ILE 450.0086
THR 460.0052
THR 470.0070
LEU 480.0060
VAL 490.0039
PRO 500.0044
ALA 510.0063
ILE 520.0076
ALA 530.0079
PHE 540.0106
THR 550.0122
MET 560.0115
TYR 570.0119
LEU 580.0163
SER 590.0156
MET 600.0131
LEU 610.0164
LEU 620.0195
GLY 630.0157
TYR 640.0161
GLY 650.0122
LEU 660.0099
THR 670.0100
MET 680.0115
VAL 690.0161
PRO 700.0236
PHE 710.0254
GLY 720.0318
GLY 730.0361
GLU 740.0262
GLN 750.0185
ASN 760.0108
PRO 770.0030
ILE 780.0040
TYR 790.0054
TRP 800.0070
ALA 810.0095
ARG 820.0061
TYR 830.0061
ALA 840.0068
ASP 850.0070
TRP 860.0053
LEU 870.0054
PHE 880.0053
THR 890.0055
THR 900.0055
PRO 910.0062
LEU 920.0051
LEU 930.0037
LEU 940.0058
LEU 950.0055
ASP 960.0026
LEU 970.0035
ALA 980.0069
LEU 990.0052
LEU 1000.0014
VAL 1010.0045
ASP 1020.0072
ALA 1030.0117
ASP 1040.0181
GLN 1050.0195
GLY 1060.0213
THR 1070.0175
ILE 1080.0135
LEU 1090.0165
ALA 1100.0161
LEU 1110.0125
VAL 1120.0102
GLY 1130.0117
ALA 1140.0104
ASP 1150.0080
GLY 1160.0074
ILE 1170.0059
MET 1180.0043
ILE 1190.0047
GLY 1200.0088
THR 1210.0074
GLY 1220.0056
LEU 1230.0080
VAL 1240.0140
GLY 1250.0124
ALA 1260.0099
LEU 1270.0149
THR 1280.0208
LYS 1290.0261
VAL 1300.0292
TYR 1310.0263
SER 1320.0281
TYR 1330.0247
ARG 1340.0176
PHE 1350.0172
VAL 1360.0167
TRP 1370.0122
TRP 1380.0086
ALA 1390.0091
ILE 1400.0053
SER 1410.0019
THR 1420.0017
ALA 1430.0029
ALA 1440.0066
MET 1450.0069
LEU 1460.0107
TYR 1470.0130
ILE 1480.0118
LEU 1490.0121
TYR 1500.0176
VAL 1510.0165
LEU 1520.0133
PHE 1530.0166
PHE 1540.0206
GLY 1550.0184
PHE 1560.0136
THR 1570.0151
SER 1580.0183
LYS 1590.0135
ALA 1600.0099
GLU 1610.0142
SER 1620.0109
MET 1630.0046
ARG 1640.0083
PRO 1650.0161
GLU 1660.0168
VAL 1670.0090
ALA 1680.0111
SER 1690.0164
THR 1700.0122
PHE 1710.0088
LYS 1720.0132
VAL 1730.0136
LEU 1740.0091
ARG 1750.0109
ASN 1760.0132
VAL 1770.0103
THR 1780.0080
VAL 1790.0103
VAL 1800.0086
LEU 1810.0064
TRP 1820.0065
SER 1830.0069
ALA 1840.0051
TYR 1850.0037
PRO 1860.0032
VAL 1870.0082
VAL 1880.0085
TRP 1890.0063
LEU 1900.0117
ILE 1910.0138
GLY 1920.0106
SER 1930.0087
GLU 1940.0087
GLY 1950.0137
ALA 1960.0184
GLY 1970.0154
ILE 1980.0178
VAL 1990.0144
PRO 2000.0107
LEU 2010.0074
ASN 2020.0112
ILE 2030.0135
GLU 2040.0091
THR 2050.0091
LEU 2060.0123
LEU 2070.0109
PHE 2080.0070
MET 2090.0098
VAL 2100.0089
LEU 2110.0064
ASP 2120.0062
VAL 2130.0067
SER 2140.0048
ALA 2150.0047
LYS 2160.0038
VAL 2170.0034
GLY 2180.0073
PHE 2190.0057
GLY 2200.0061
LEU 2210.0121
ILE 2220.0131
LEU 2230.0098
LEU 2240.0146
ARG 2250.0198
SER 2260.0201
ARG 2270.0232
ALA 2280.0147
ILE 2290.0151
PHE 2300.0224
GLY 2310.0218
GLU 2320.0232
ALA 2330.0068
GLU 2340.0780

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.