CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  EXP_5T5S_unrelaxed_rank_001_alphafold2_ptm_model_5_seed_000  ***

<R2> analysis for 24021912430841891

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0706
ALA 10.0668
GLU 20.0482
ALA 30.0193
GLN 40.0383
LYS 50.0413
ALA 60.0191
LEU 70.0096
ARG 80.0215
LYS 90.0118
ALA 100.0111
GLU 110.0099
SER 120.0107
LEU 130.0109
LYS 140.0127
LYS 150.0139
CYS 160.0154
LEU 170.0122
SER 180.0181
VAL 190.0241
MET 200.0103
GLU 210.0168
ALA 220.0275
LYS 230.0167
VAL 240.0171
LYS 250.0353
ALA 260.0325
GLN 270.0244
THR 280.0384
ALA 290.0333
PRO 300.0352
ASN 310.0270
LYS 320.0421
ASP 330.0396
VAL 340.0243
GLN 350.0378
ARG 360.0502
GLU 370.0338
ILE 380.0250
ALA 390.0370
ASP 400.0355
LEU 410.0132
GLY 420.0083
GLU 430.0065
ALA 440.0150
LEU 450.0129
ALA 460.0184
THR 470.0252
ALA 480.0228
VAL 490.0327
ILE 500.0247
PRO 510.0349
GLN 520.0407
TRP 530.0436
GLN 540.0303
LYS 550.0239
ASP 560.0293
GLU 570.0267
LEU 580.0160
ARG 590.0089
GLU 600.0134
THR 610.0171
LEU 620.0106
LYS 630.0226
SER 640.0336
LEU 650.0302
LYS 660.0401
LYS 670.0601
VAL 680.0527
MET 690.0466
ASP 700.0677
ASP 710.0706
LEU 720.0543
ASP 730.0528
ARG 740.0665
ALA 750.0512
SER 760.0303
LYS 770.0251
ALA 780.0295
ASP 790.0249
VAL 800.0120
GLN 810.0126
LYS 820.0150
ARG 830.0174
VAL 840.0126
LEU 850.0125
GLU 860.0146
LYS 870.0134
THR 880.0106
LYS 890.0091
GLN 900.0098
PHE 910.0072
ILE 920.0056
ASP 930.0051
SER 940.0057
ASN 950.0062
PRO 960.0068
ASN 970.0082
GLN 980.0074
PRO 990.0067
LEU 1000.0045
VAL 1010.0035
ILE 1020.0043
LEU 1030.0070
GLU 1040.0082
MET 1050.0110
GLU 1060.0120
SER 1070.0116
GLY 1080.0069
ALA 1090.0078
THR 1100.0116
ALA 1110.0094
LYS 1120.0109
ALA 1130.0109
LEU 1140.0098
ASN 1150.0104
GLU 1160.0113
ALA 1170.0102
LEU 1180.0086
LYS 1190.0105
LEU 1200.0100
PHE 1210.0079
LYS 1220.0098
MET 1230.0120
HIS 1240.0102
SER 1250.0083
PRO 1260.0099
GLN 1270.0089
THR 1280.0058
SER 1290.0036
ALA 1300.0045
MET 1310.0058
LEU 1320.0078
PHE 1330.0081
THR 1340.0099
VAL 1350.0116
ASP 1360.0158
ASN 1370.0193
GLU 1380.0239
ALA 1390.0211
GLY 1400.0150
LYS 1410.0166
ILE 1420.0135
THR 1430.0120
CYS 1440.0104
LEU 1450.0083
CYS 1460.0071
GLN 1470.0064
VAL 1480.0038
PRO 1490.0056
GLN 1500.0046
ASN 1510.0057
ALA 1520.0051
ALA 1530.0048
ASN 1540.0059
ARG 1550.0094
GLY 1560.0108
LEU 1570.0082
LYS 1580.0091
ALA 1590.0089
SER 1600.0136
GLU 1610.0148
TRP 1620.0116
VAL 1630.0130
GLN 1640.0170
GLN 1650.0156
VAL 1660.0144
SER 1670.0175
GLY 1680.0195
LEU 1690.0150
MET 1700.0152
ASP 1710.0194
GLY 1720.0214
LYS 1730.0255
GLY 1740.0178
GLY 1750.0184
GLY 1760.0164
LYS 1770.0141
ASP 1780.0098
VAL 1790.0070
SER 1800.0102
ALA 1810.0122
GLN 1820.0138
ALA 1830.0167
THR 1840.0184
GLY 1850.0181
LYS 1860.0167
ASN 1870.0134
VAL 1880.0106
GLY 1890.0092
CYS 1900.0095
LEU 1910.0091
GLN 1920.0068
GLU 1930.0091
ALA 1940.0096
LEU 1950.0067
GLN 1960.0075
LEU 1970.0113
ALA 1980.0089
THR 1990.0071
SER 2000.0114
PHE 2010.0127
ALA 2020.0089
GLN 2030.0112
LEU 2040.0156
ARG 2050.0129
LEU 2060.0113
GLY 2070.0180

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.