CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  conf_2  ***

CA strain for 2404230347251977942

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1ALA 2 -0.1436
ALA 2GLU 3 0.1113
GLU 3PHE 4 -0.0217
PHE 4ARG 5 -0.0415
ARG 5HIS 6 -0.0739
HIS 6ASP 7 0.0449
ASP 7SER 8 -0.0462
SER 8GLY 9 0.0447
GLY 9TYR 10 0.2943
TYR 10GLU 11 -0.1227
GLU 11VAL 12 -0.0432
VAL 12HIS 13 -0.1674
HIS 13HIS 14 0.3118
HIS 14GLN 15 -0.0863
GLN 15LYS 16 0.1331
LYS 16LEU 17 -0.0026
LEU 17VAL 18 -0.0129
VAL 18PHE 19 0.0789
PHE 19PHE 20 0.0858
PHE 20ALA 21 -0.1780
ALA 21GLU 22 0.4183
GLU 22ASP 23 -0.0372
ASP 23VAL 24 -0.0855
VAL 24GLY 25 -0.0928
GLY 25SER 26 -0.1458
SER 26ASN 27 0.0196
ASN 27LYS 28 0.0258
LYS 28GLY 29 -0.0493
GLY 29ALA 30 -0.0974
ALA 30ILE 31 0.1077
ILE 31ILE 32 0.2371
ILE 32GLY 33 0.1826
GLY 33LEU 34 -0.0985
LEU 34MET 35 0.0038
MET 35VAL 36 0.0429
VAL 36GLY 37 0.2765
GLY 37GLY 38 0.0038
GLY 38VAL 39 0.2358
VAL 39VAL 40 -0.0655

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.