This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0584
VAL 2
PHE 3
0.0524
PHE 3
GLY 4
-0.1712
GLY 4
ARG 5
-0.4241
ARG 5
CYS 6
0.7416
CYS 6
GLU 7
-0.2329
GLU 7
LEU 8
0.0290
LEU 8
ALA 9
0.0494
ALA 9
ALA 10
-0.0426
ALA 10
ALA 11
0.1937
ALA 11
MET 12
-0.0348
MET 12
LYS 13
-0.0299
LYS 13
ARG 14
0.0248
ARG 14
HIS 15
-0.0700
HIS 15
GLY 16
0.1838
GLY 16
LEU 17
0.1616
LEU 17
ASP 18
0.0382
ASP 18
ASN 19
-0.1983
ASN 19
TYR 20
0.1424
TYR 20
ARG 21
-0.2004
ARG 21
GLY 22
0.1193
GLY 22
TYR 23
-0.0188
TYR 23
SER 24
0.0273
SER 24
LEU 25
-0.1747
LEU 25
GLY 26
0.0979
GLY 26
ASN 27
-0.0435
ASN 27
TRP 28
0.0870
TRP 28
VAL 29
0.0367
VAL 29
CYS 30
0.1061
CYS 30
ALA 31
-0.0042
ALA 31
ALA 32
0.0390
ALA 32
LYS 33
-0.0145
LYS 33
PHE 34
0.1046
PHE 34
GLU 35
-0.2333
GLU 35
SER 36
0.2025
SER 36
ASN 37
-0.0421
ASN 37
PHE 38
0.0761
PHE 38
ASN 39
-0.1512
ASN 39
THR 40
-0.0627
THR 40
GLN 41
0.0080
GLN 41
ALA 42
-0.0057
ALA 42
THR 43
-0.0813
THR 43
ASN 44
-0.0525
ASN 44
ARG 45
-0.0121
ARG 45
ASN 46
-0.0086
ASN 46
THR 47
0.1784
THR 47
ASP 48
-0.0184
ASP 48
GLY 49
0.0006
GLY 49
SER 50
0.0478
SER 50
THR 51
-0.0361
THR 51
ASP 52
0.0014
ASP 52
TYR 53
0.0206
TYR 53
GLY 54
-0.0535
GLY 54
ILE 55
-0.0374
ILE 55
LEU 56
0.0792
LEU 56
GLN 57
0.0529
GLN 57
ILE 58
-0.1374
ILE 58
ASN 59
0.0020
ASN 59
SER 60
-0.0059
SER 60
ARG 61
-0.0743
ARG 61
TRP 62
0.0867
TRP 62
TRP 63
-0.0176
TRP 63
CYS 64
0.0657
CYS 64
ASN 65
0.0012
ASN 65
ASP 66
-0.0323
ASP 66
GLY 67
0.0011
GLY 67
ARG 68
-0.0516
ARG 68
THR 69
0.0569
THR 69
PRO 70
-0.0079
PRO 70
GLY 71
0.0429
GLY 71
SER 72
0.0049
SER 72
ARG 73
0.0013
ARG 73
ASN 74
0.0604
ASN 74
LEU 75
-0.0242
LEU 75
CYS 76
0.0215
CYS 76
ASN 77
-0.0090
ASN 77
ILE 78
-0.0133
ILE 78
PRO 79
-0.0193
PRO 79
CYS 80
-0.0137
CYS 80
SER 81
0.0118
SER 81
ALA 82
-0.0137
ALA 82
LEU 83
-0.0034
LEU 83
LEU 84
0.0313
LEU 84
SER 85
-0.0039
SER 85
SER 86
-0.0610
SER 86
ASP 87
-0.0151
ASP 87
ILE 88
0.0341
ILE 88
THR 89
-0.0820
THR 89
ALA 90
0.0227
ALA 90
SER 91
-0.0283
SER 91
VAL 92
0.0246
VAL 92
ASN 93
-0.0013
ASN 93
CYS 94
0.0259
CYS 94
ALA 95
-0.0002
ALA 95
LYS 96
0.0189
LYS 96
LYS 97
-0.0262
LYS 97
ILE 98
-0.0752
ILE 98
VAL 99
0.1037
VAL 99
SER 100
0.0578
SER 100
ASP 101
-0.0241
ASP 101
GLY 102
0.1026
GLY 102
ASN 103
0.0927
ASN 103
GLY 104
-0.1499
GLY 104
MET 105
0.0622
MET 105
ASN 106
-0.0929
ASN 106
ALA 107
0.0020
ALA 107
TRP 108
0.0986
TRP 108
VAL 109
-0.2114
VAL 109
ALA 110
0.1467
ALA 110
TRP 111
-0.0023
TRP 111
ARG 112
0.0449
ARG 112
ASN 113
-0.0072
ASN 113
ARG 114
0.0656
ARG 114
CYS 115
0.0194
CYS 115
LYS 116
-0.0011
LYS 116
GLY 117
0.0779
GLY 117
THR 118
0.0874
THR 118
ASP 119
-0.1164
ASP 119
VAL 120
0.1216
VAL 120
GLN 121
-0.0969
GLN 121
ALA 122
0.0332
ALA 122
TRP 123
-0.0929
TRP 123
ILE 124
0.0137
ILE 124
ARG 125
0.0618
ARG 125
GLY 126
0.5709
GLY 126
CYS 127
-0.2653
CYS 127
ARG 128
-0.0380
ARG 128
LEU 129
-0.7065
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.