This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
LYS 2
-0.4462
LYS 2
ALA 3
-0.1465
ALA 3
VAL 4
-0.5221
VAL 4
ILE 5
-0.2226
ILE 5
ASN 6
-0.0941
ASN 6
GLY 7
-0.2178
GLY 7
GLU 8
0.0519
GLU 8
GLN 9
0.0365
GLN 9
ILE 10
0.0907
ILE 10
ARG 11
-0.0993
ARG 11
SER 12
0.0063
SER 12
ILE 13
0.2047
ILE 13
SER 14
-0.1503
SER 14
ASP 15
0.1268
ASP 15
LEU 16
0.0249
LEU 16
HIS 17
0.1335
HIS 17
GLN 18
-0.1998
GLN 18
THR 19
0.3242
THR 19
LEU 20
-0.1926
LEU 20
LYS 21
0.2283
LYS 21
LYS 22
-0.1091
LYS 22
GLU 23
0.4287
GLU 23
LEU 24
-0.2425
LEU 24
ALA 25
0.1434
ALA 25
LEU 26
0.1623
LEU 26
PRO 27
0.0708
PRO 27
GLU 28
-0.0389
GLU 28
TYR 29
-0.0946
TYR 29
TYR 30
-0.0038
TYR 30
GLY 31
-0.1117
GLY 31
GLU 32
0.2244
GLU 32
ASN 33
-0.1192
ASN 33
LEU 34
-0.1973
LEU 34
ASP 35
0.3362
ASP 35
ALA 36
-0.2421
ALA 36
LEU 37
-0.0132
LEU 37
TRP 38
-0.2412
TRP 38
ASP 39
0.0095
ASP 39
CYS 40
-0.0504
CYS 40
LEU 41
-0.2121
LEU 41
THR 42
-0.0301
THR 42
GLY 43
-0.1613
GLY 43
TRP 44
-0.0724
TRP 44
VAL 45
-0.2140
VAL 45
GLU 46
0.1385
GLU 46
TYR 47
0.0780
TYR 47
PRO 48
0.0416
PRO 48
LEU 49
-0.0253
LEU 49
VAL 50
-0.2136
VAL 50
LEU 51
-0.1156
LEU 51
GLU 52
-0.1647
GLU 52
TRP 53
-0.3891
TRP 53
ARG 54
0.0874
ARG 54
GLN 55
-0.4033
GLN 55
PHE 56
0.4902
PHE 56
GLU 57
-0.2530
GLU 57
GLN 58
0.1854
GLN 58
SER 59
0.1357
SER 59
LYS 60
-0.0430
LYS 60
GLN 61
0.0519
GLN 61
LEU 62
0.0090
LEU 62
THR 63
0.0510
THR 63
GLU 64
0.1001
GLU 64
ASN 65
0.1597
ASN 65
GLY 66
-0.0791
GLY 66
ALA 67
-0.1442
ALA 67
GLU 68
-0.0781
GLU 68
SER 69
0.2530
SER 69
VAL 70
0.0295
VAL 70
LEU 71
-0.1277
LEU 71
GLN 72
0.0129
GLN 72
VAL 73
0.0198
VAL 73
PHE 74
-0.0780
PHE 74
ARG 75
-0.0431
ARG 75
GLU 76
0.0497
GLU 76
ALA 77
0.0427
ALA 77
LYS 78
-0.1420
LYS 78
ALA 79
0.0059
ALA 79
GLU 80
-0.0426
GLU 80
GLY 81
-0.0555
GLY 81
CYS 82
-0.0798
CYS 82
ASP 83
-0.0908
ASP 83
ILE 84
-0.0237
ILE 84
THR 85
-0.0776
THR 85
ILE 86
-0.1170
ILE 86
ILE 87
0.0097
ILE 87
LEU 88
-0.2898
LEU 88
SER 89
0.2769
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.