This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
LYS 2
-0.0908
LYS 2
ALA 3
-0.0830
ALA 3
VAL 4
-0.1405
VAL 4
ILE 5
-0.1255
ILE 5
ASN 6
-0.0456
ASN 6
GLY 7
-0.0918
GLY 7
GLU 8
-0.0141
GLU 8
GLN 9
0.1446
GLN 9
ILE 10
0.1205
ILE 10
ARG 11
-0.0533
ARG 11
SER 12
0.5789
SER 12
ILE 13
0.1906
ILE 13
SER 14
-0.1325
SER 14
ASP 15
0.0333
ASP 15
LEU 16
-0.2141
LEU 16
HIS 17
-0.0495
HIS 17
GLN 18
0.1241
GLN 18
THR 19
0.2028
THR 19
LEU 20
-0.0627
LEU 20
LYS 21
0.1532
LYS 21
LYS 22
0.0629
LYS 22
GLU 23
0.0192
GLU 23
LEU 24
0.0482
LEU 24
ALA 25
0.1080
ALA 25
LEU 26
0.0851
LEU 26
PRO 27
0.1395
PRO 27
GLU 28
0.1922
GLU 28
TYR 29
-0.1440
TYR 29
TYR 30
-0.0805
TYR 30
GLY 31
0.0838
GLY 31
GLU 32
-0.1094
GLU 32
ASN 33
0.0351
ASN 33
LEU 34
-0.0763
LEU 34
ASP 35
-0.0088
ASP 35
ALA 36
-0.0332
ALA 36
LEU 37
0.0113
LEU 37
TRP 38
-0.0552
TRP 38
ASP 39
-0.0141
ASP 39
CYS 40
0.0171
CYS 40
LEU 41
-0.0174
LEU 41
THR 42
-0.0218
THR 42
GLY 43
-0.0315
GLY 43
TRP 44
-0.0469
TRP 44
VAL 45
0.1243
VAL 45
GLU 46
0.0003
GLU 46
TYR 47
0.0220
TYR 47
PRO 48
0.0170
PRO 48
LEU 49
-0.0821
LEU 49
VAL 50
0.0183
VAL 50
LEU 51
0.0179
LEU 51
GLU 52
-0.0344
GLU 52
TRP 53
0.0137
TRP 53
ARG 54
-0.0468
ARG 54
GLN 55
-0.0080
GLN 55
PHE 56
0.0007
PHE 56
GLU 57
0.0548
GLU 57
GLN 58
0.0339
GLN 58
SER 59
-0.0705
SER 59
LYS 60
-0.0598
LYS 60
GLN 61
0.0685
GLN 61
LEU 62
0.1689
LEU 62
THR 63
-0.0041
THR 63
GLU 64
-0.1164
GLU 64
ASN 65
0.2261
ASN 65
GLY 66
-0.1503
GLY 66
ALA 67
0.0087
ALA 67
GLU 68
-0.0189
GLU 68
SER 69
-0.1179
SER 69
VAL 70
0.0016
VAL 70
LEU 71
-0.0821
LEU 71
GLN 72
-0.1065
GLN 72
VAL 73
0.0081
VAL 73
PHE 74
-0.0400
PHE 74
ARG 75
-0.0688
ARG 75
GLU 76
-0.0766
GLU 76
ALA 77
0.0268
ALA 77
LYS 78
-0.0658
LYS 78
ALA 79
-0.0560
ALA 79
GLU 80
-0.0327
GLU 80
GLY 81
-0.0019
GLY 81
CYS 82
-0.0856
CYS 82
ASP 83
-0.0260
ASP 83
ILE 84
0.0200
ILE 84
THR 85
-0.0278
THR 85
ILE 86
0.1577
ILE 86
ILE 87
-0.1379
ILE 87
LEU 88
0.1705
LEU 88
SER 89
-0.1416
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.