This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
-0.0320
VAL 339
ASN 340
0.0585
ASN 340
LEU 341
-0.0235
LEU 341
ASP 342
0.0241
ASP 342
ARG 343
0.0526
ARG 343
TYR 344
0.0115
TYR 344
GLN 345
0.0004
GLN 345
THR 346
0.0894
THR 346
ALA 347
0.1281
ALA 347
LEU 348
0.0058
LEU 348
GLU 349
-0.0020
GLU 349
GLU 350
0.1848
GLU 350
VAL 351
0.0026
VAL 351
LEU 352
0.0504
LEU 352
SER 353
0.0752
SER 353
TRP 354
0.2220
TRP 354
LEU 355
0.0023
LEU 355
LEU 356
-0.0084
LEU 356
SER 357
0.1676
SER 357
ALA 358
0.0978
ALA 358
GLU 359
-0.0103
GLU 359
ASP 360
0.0688
ASP 360
THR 361
0.1806
THR 361
LEU 362
-0.0595
LEU 362
GLN 363
-0.0353
GLN 363
ALA 364
0.1026
ALA 364
GLN 365
0.0794
GLN 365
GLY 366
-0.1019
GLY 366
GLU 367
-0.1622
GLU 367
ILE 368
-0.0373
ILE 368
SER 369
0.1078
SER 369
ASN 370
-0.0279
ASN 370
ASP 371
0.0003
ASP 371
VAL 372
-0.0102
VAL 372
GLU 373
0.0017
GLU 373
VAL 374
0.0402
VAL 374
VAL 375
-0.0035
VAL 375
LYS 376
-0.0083
LYS 376
ASP 377
0.0369
ASP 377
GLN 378
0.0730
GLN 378
PHE 379
-0.0102
PHE 379
HIS 380
0.0046
HIS 380
THR 381
0.1734
THR 381
HIS 382
-0.0306
HIS 382
GLU 383
0.0203
GLU 383
GLU 383
0.0073
GLU 383
GLY 384
0.1151
GLY 384
TYR 385
0.1334
TYR 385
MET 386
-0.0078
MET 386
MET 387
0.0683
MET 387
ASP 388
0.2048
ASP 388
LEU 389
-0.0352
LEU 389
THR 390
0.0004
THR 390
ALA 391
0.1240
ALA 391
HIS 392
0.0106
HIS 392
GLN 393
0.0007
GLN 393
GLY 394
0.1081
GLY 394
ARG 395
0.1233
ARG 395
VAL 396
-0.0556
VAL 396
GLY 397
0.0151
GLY 397
ASN 398
0.1814
ASN 398
ILE 399
-0.0347
ILE 399
LEU 400
-0.0076
LEU 400
GLN 401
0.1429
GLN 401
LEU 402
0.0701
LEU 402
GLY 403
-0.0012
GLY 403
SER 404
0.0071
SER 404
LYS 405
0.0555
LYS 405
LEU 406
-0.0071
LEU 406
ILE 407
0.0038
ILE 407
GLY 408
0.0333
GLY 408
THR 409
0.0264
THR 409
GLY 410
-0.0302
GLY 410
LYS 411
-0.0084
LYS 411
LEU 412
-0.0024
LEU 412
SER 413
-0.0130
SER 413
GLU 414
0.0037
GLU 414
ASP 415
0.0142
ASP 415
GLU 416
0.0270
GLU 416
GLU 417
-0.0070
GLU 417
THR 418
-0.0003
THR 418
GLU 419
0.0672
GLU 419
VAL 420
-0.0169
VAL 420
GLN 421
-0.0043
GLN 421
GLU 422
0.0957
GLU 422
GLN 423
0.0236
GLN 423
MET 424
-0.0436
MET 424
ASN 425
0.0737
ASN 425
LEU 426
0.1433
LEU 426
LEU 427
0.0094
LEU 427
ASN 428
-0.0131
ASN 428
SER 429
0.1681
SER 429
ARG 430
0.0800
ARG 430
TRP 431
-0.1282
TRP 431
GLU 432
0.0359
GLU 432
CYS 433
0.1190
CYS 433
LEU 434
0.0637
LEU 434
ARG 435
-0.0278
ARG 435
VAL 436
0.1001
VAL 436
ALA 437
0.1621
ALA 437
SER 438
-0.0293
SER 438
MET 439
-0.0069
MET 439
GLU 440
0.1531
GLU 440
LYS 441
0.0867
LYS 441
GLN 442
0.0089
GLN 442
SER 443
0.0672
SER 443
ASN 444
0.0648
ASN 444
LEU 445
0.0028
LEU 445
HIS 446
-0.0188
HIS 446
ARG 447
0.0892
ARG 447
VAL 448
-0.0007
VAL 448
LEU 449
-0.0045
LEU 449
MET 450
0.0147
MET 450
ASP 451
0.0177
ASP 451
LEU 452
-0.0103
LEU 452
GLN 453
0.0056
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.