This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
0.0081
VAL 339
ASN 340
-0.0226
ASN 340
LEU 341
0.0010
LEU 341
ASP 342
0.0038
ASP 342
ARG 343
-0.0309
ARG 343
TYR 344
-0.0230
TYR 344
GLN 345
0.0058
GLN 345
THR 346
0.0094
THR 346
ALA 347
-0.0214
ALA 347
LEU 348
-0.0331
LEU 348
GLU 349
-0.0339
GLU 349
GLU 350
0.0100
GLU 350
VAL 351
-0.0303
VAL 351
LEU 352
-0.0371
LEU 352
SER 353
-0.0123
SER 353
TRP 354
0.0047
TRP 354
LEU 355
-0.0646
LEU 355
LEU 356
-0.0704
LEU 356
SER 357
-0.0443
SER 357
ALA 358
-0.0046
ALA 358
GLU 359
-0.0450
GLU 359
ASP 360
-0.0805
ASP 360
THR 361
0.0001
THR 361
LEU 362
-0.0024
LEU 362
GLN 363
-0.0464
GLN 363
ALA 364
-0.1064
ALA 364
GLN 365
0.0999
GLN 365
GLY 366
-0.1015
GLY 366
GLU 367
0.1585
GLU 367
ILE 368
0.0668
ILE 368
SER 369
-0.0198
SER 369
ASN 370
0.0237
ASN 370
ASP 371
0.0003
ASP 371
VAL 372
-0.0044
VAL 372
GLU 373
-0.0174
GLU 373
VAL 374
-0.0001
VAL 374
VAL 375
-0.0276
VAL 375
LYS 376
-0.0022
LYS 376
ASP 377
0.0166
ASP 377
GLN 378
-0.0192
GLN 378
PHE 379
-0.0029
PHE 379
HIS 380
-0.0097
HIS 380
THR 381
0.0208
THR 381
HIS 382
-0.0362
HIS 382
GLU 383
-0.0254
GLU 383
GLU 383
0.0045
GLU 383
GLY 384
0.0459
GLY 384
TYR 385
-0.0975
TYR 385
MET 386
-0.0336
MET 386
MET 387
0.0384
MET 387
ASP 388
-0.0018
ASP 388
LEU 389
-0.0288
LEU 389
THR 390
0.0254
THR 390
ALA 391
-0.0175
ALA 391
HIS 392
-0.0250
HIS 392
GLN 393
-0.0084
GLN 393
GLY 394
-0.0231
GLY 394
ARG 395
-0.0242
ARG 395
VAL 396
0.0403
VAL 396
GLY 397
-0.0090
GLY 397
ASN 398
-0.0340
ASN 398
ILE 399
0.0085
ILE 399
LEU 400
0.0111
LEU 400
GLN 401
-0.0265
GLN 401
LEU 402
-0.0227
LEU 402
GLY 403
0.0175
GLY 403
SER 404
0.0483
SER 404
LYS 405
-0.0258
LYS 405
LEU 406
0.0090
LEU 406
ILE 407
0.0347
ILE 407
GLY 408
0.0099
GLY 408
THR 409
-0.0109
THR 409
GLY 410
0.0047
GLY 410
LYS 411
0.0259
LYS 411
LEU 412
0.0171
LEU 412
SER 413
-0.0240
SER 413
GLU 414
0.0055
GLU 414
ASP 415
0.0131
ASP 415
GLU 416
0.0102
GLU 416
GLU 417
-0.0053
GLU 417
THR 418
0.0117
THR 418
GLU 419
0.0221
GLU 419
VAL 420
-0.0103
VAL 420
GLN 421
-0.0022
GLN 421
GLU 422
0.0411
GLU 422
GLN 423
0.0047
GLN 423
MET 424
-0.0194
MET 424
ASN 425
0.0409
ASN 425
LEU 426
0.0324
LEU 426
LEU 427
0.0405
LEU 427
ASN 428
0.0027
ASN 428
SER 429
0.0618
SER 429
ARG 430
-0.0176
ARG 430
TRP 431
0.0705
TRP 431
GLU 432
0.0175
GLU 432
CYS 433
0.0679
CYS 433
LEU 434
-0.0078
LEU 434
ARG 435
0.0880
ARG 435
VAL 436
0.0257
VAL 436
ALA 437
-0.0055
ALA 437
SER 438
0.0337
SER 438
MET 439
0.0558
MET 439
GLU 440
-0.0041
GLU 440
LYS 441
-0.0304
LYS 441
GLN 442
0.0484
GLN 442
SER 443
0.0594
SER 443
ASN 444
0.0017
ASN 444
LEU 445
-0.0204
LEU 445
HIS 446
0.0718
HIS 446
ARG 447
0.0455
ARG 447
VAL 448
-0.0158
VAL 448
LEU 449
0.0085
LEU 449
MET 450
0.0443
MET 450
ASP 451
-0.0129
ASP 451
LEU 452
-0.0126
LEU 452
GLN 453
0.0098
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.