This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
-0.0318
VAL 339
ASN 340
0.0579
ASN 340
LEU 341
-0.0128
LEU 341
ASP 342
0.0220
ASP 342
ARG 343
0.0541
ARG 343
TYR 344
0.0134
TYR 344
GLN 345
0.0021
GLN 345
THR 346
0.0865
THR 346
ALA 347
0.1234
ALA 347
LEU 348
0.0107
LEU 348
GLU 349
0.0005
GLU 349
GLU 350
0.1665
GLU 350
VAL 351
0.0102
VAL 351
LEU 352
0.0466
LEU 352
SER 353
0.0714
SER 353
TRP 354
0.2112
TRP 354
LEU 355
0.0115
LEU 355
LEU 356
-0.0036
LEU 356
SER 357
0.1701
SER 357
ALA 358
0.0926
ALA 358
GLU 359
0.0022
GLU 359
ASP 360
0.0719
ASP 360
THR 361
0.1777
THR 361
LEU 362
-0.0630
LEU 362
GLN 363
-0.0349
GLN 363
ALA 364
0.1064
ALA 364
GLN 365
0.0757
GLN 365
GLY 366
-0.0879
GLY 366
GLU 367
-0.1737
GLU 367
ILE 368
-0.0520
ILE 368
SER 369
0.1106
SER 369
ASN 370
-0.0298
ASN 370
ASP 371
0.0011
ASP 371
VAL 372
-0.0088
VAL 372
GLU 373
0.0036
GLU 373
VAL 374
0.0400
VAL 374
VAL 375
-0.0011
VAL 375
LYS 376
-0.0059
LYS 376
ASP 377
0.0310
ASP 377
GLN 378
0.0788
GLN 378
PHE 379
-0.0002
PHE 379
HSD 380
-0.0057
HSD 380
THR 381
0.1942
THR 381
HSD 382
-0.0362
HSD 382
GLU 383
0.0207
GLU 383
GLY 384
0.1314
GLY 384
TYR 385
0.1391
TYR 385
MET 386
0.0190
MET 386
MET 387
0.1062
MET 387
ASP 388
0.1753
ASP 388
LEU 389
-0.0334
LEU 389
THR 390
0.0100
THR 390
ALA 391
0.1206
ALA 391
HSD 392
0.0158
HSD 392
GLN 393
0.0027
GLN 393
GLY 394
0.1140
GLY 394
ARG 395
0.1204
ARG 395
VAL 396
-0.0481
VAL 396
GLY 397
0.0154
GLY 397
ASN 398
0.1712
ASN 398
ILE 399
-0.0320
ILE 399
LEU 400
-0.0041
LEU 400
GLN 401
0.1380
GLN 401
LEU 402
0.0698
LEU 402
GLY 403
-0.0036
GLY 403
SER 404
0.0037
SER 404
LYS 405
0.0565
LYS 405
LEU 406
-0.0090
LEU 406
ILE 407
-0.0024
ILE 407
GLY 408
0.0335
GLY 408
THR 409
0.0272
THR 409
GLY 410
-0.0361
GLY 410
LYS 411
-0.0100
LYS 411
LEU 412
-0.0041
LEU 412
SER 413
-0.0183
SER 413
GLU 414
0.0014
GLU 414
LEU 415
0.0029
LEU 415
GLU 416
0.0382
GLU 416
GLU 417
-0.0045
GLU 417
THR 418
0.0012
THR 418
GLU 419
0.0609
GLU 419
VAL 420
-0.0146
VAL 420
GLN 421
-0.0014
GLN 421
GLU 422
0.0890
GLU 422
GLN 423
0.0179
GLN 423
MET 424
-0.0388
MET 424
ASN 425
0.0679
ASN 425
LEU 426
0.1289
LEU 426
LEU 427
-0.0015
LEU 427
ASN 428
-0.0116
ASN 428
SER 429
0.1496
SER 429
ARG 430
0.0739
ARG 430
TRP 431
-0.1242
TRP 431
GLU 432
0.0205
GLU 432
CYS 433
0.0972
CYS 433
LEU 434
0.0556
LEU 434
ARG 435
-0.0502
ARG 435
VAL 436
0.0863
VAL 436
ALA 437
0.1525
ALA 437
SER 438
-0.0321
SER 438
MET 439
-0.0233
MET 439
GLU 440
0.0982
GLU 440
LYS 441
0.1016
LYS 441
GLN 442
0.0142
GLN 442
SER 443
0.0815
SER 443
ASN 444
0.0483
ASN 444
LEU 445
0.0003
LEU 445
HSD 446
-0.0103
HSD 446
ARG 447
0.0657
ARG 447
VAL 448
-0.0036
VAL 448
LEU 449
-0.0067
LEU 449
MET 450
0.0144
MET 450
ASP 451
0.0085
ASP 451
LEU 452
-0.0105
LEU 452
GLN 453
0.0166
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.