CNRS Nantes University US2B US2B
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***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220092131172147

---  normal mode 16  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ARG 1PRO 2 0.0001
PRO 2GLY 3 0.0461
GLY 3LEU 4 0.0003
LEU 4PRO 5 -0.3175
PRO 5VAL 6 0.0001
VAL 6GLU 7 -0.0422
GLU 7TYR 8 -0.0001
TYR 8LEU 9 0.0412
LEU 9GLN 10 0.0000
GLN 10VAL 11 0.0858
VAL 11PRO 12 -0.0001
PRO 12SER 13 0.0808
SER 13ALA 14 -0.0004
ALA 14SER 15 0.1919
SER 15MET 16 -0.0001
MET 16GLY 17 -0.0077
GLY 17ARG 18 -0.0001
ARG 18ASP 19 0.0594
ASP 19ILE 20 -0.0001
ILE 20LYS 21 0.1751
LYS 21VAL 22 -0.0002
VAL 22GLN 23 0.0148
GLN 23PHE 24 -0.0002
PHE 24GLN 25 -0.0324
GLN 25GLY 26 -0.0002
GLY 26GLY 27 0.1487
GLY 27GLY 28 -0.0002
GLY 28PRO 29 -0.0530
PRO 29HIS 30 -0.0002
HIS 30ALA 31 -0.1155
ALA 31VAL 32 0.0002
VAL 32TYR 33 -0.2353
TYR 33LEU 34 -0.0000
LEU 34LEU 35 -0.2403
LEU 35ASP 36 0.0002
ASP 36GLY 37 -0.4645
GLY 37LEU 38 0.0002
LEU 38ARG 39 -0.1556
ARG 39ALA 40 0.0002
ALA 40GLN 41 -0.0141
GLN 41ASP 42 -0.0002
ASP 42ASP 43 0.0235
ASP 43TYR 44 -0.0005
TYR 44ASN 45 0.0836
ASN 45GLY 46 0.0001
GLY 46TRP 47 -0.1422
TRP 47ASP 48 -0.0002
ASP 48ILE 49 0.0122
ILE 49ASN 50 0.0000
ASN 50THR 51 0.0344
THR 51PRO 52 -0.0003
PRO 52ALA 53 -0.0046
ALA 53PHE 54 0.0004
PHE 54GLU 55 0.0128
GLU 55GLU 56 0.0001
GLU 56TYR 57 0.0159
TYR 57TYR 58 0.0001
TYR 58GLN 59 -0.0395
GLN 59SER 60 0.0001
SER 60GLY 61 -0.0324
GLY 61LEU 62 -0.0002
LEU 62SER 63 0.0795
SER 63VAL 64 0.0000
VAL 64ILE 65 -0.1634
ILE 65MET 66 -0.0000
MET 66PRO 67 -0.0926
PRO 67VAL 68 -0.0002
VAL 68GLY 69 -0.1650
GLY 69GLY 70 0.0002
GLY 70GLN 71 -0.0878
GLN 71SER 72 -0.0003
SER 72SER 73 0.0031
SER 73PHE 74 -0.0003
PHE 74TYR 75 0.0910
TYR 75THR 76 -0.0002
THR 76ASP 77 -0.0835
ASP 77TRP 78 0.0002
TRP 78TYR 79 0.0967
TYR 79GLN 80 0.0003
GLN 80PRO 81 -0.0833
PRO 81SER 82 -0.0001
SER 82GLN 83 -0.0155
GLN 83SER 84 0.0003
SER 84ASN 85 0.0184
ASN 85GLY 86 -0.0003
GLY 86GLN 87 -0.0823
GLN 87ASN 88 0.0000
ASN 88TYR 89 -0.0271
TYR 89THR 90 -0.0000
THR 90TYR 91 -0.0310
TYR 91LYS 92 0.0002
LYS 92TRP 93 -0.0225
TRP 93GLU 94 0.0001
GLU 94THR 95 0.0590
THR 95PHE 96 -0.0002
PHE 96LEU 97 -0.0077
LEU 97THR 98 0.0001
THR 98ARG 99 0.0642
ARG 99GLU 100 -0.0004
GLU 100MET 101 -0.0656
MET 101PRO 102 -0.0002
PRO 102ALA 103 0.0049
ALA 103TRP 104 0.0000
TRP 104LEU 105 -0.0274
LEU 105GLN 106 -0.0002
GLN 106ALA 107 0.1577
ALA 107ASN 108 0.0000
ASN 108LYS 109 -0.0436
LYS 109GLY 110 0.0002
GLY 110VAL 111 0.1308
VAL 111SER 112 0.0003
SER 112PRO 113 -0.0793
PRO 113THR 114 -0.0001
THR 114GLY 115 0.1005
GLY 115ASN 116 0.0001
ASN 116ALA 117 0.0297
ALA 117ALA 118 0.0004
ALA 118VAL 119 0.0537
VAL 119GLY 120 0.0001
GLY 120LEU 121 0.0935
LEU 121SER 122 -0.0001
SER 122MET 123 -0.1194
MET 123SER 124 -0.0002
SER 124GLY 125 -0.1961
GLY 125GLY 126 -0.0001
GLY 126SER 127 0.0768
SER 127ALA 128 0.0005
ALA 128LEU 129 0.0255
LEU 129ILE 130 0.0002
ILE 130LEU 131 0.2572
LEU 131ALA 132 0.0002
ALA 132ALA 133 0.0318
ALA 133TYR 134 -0.0001
TYR 134TYR 135 0.3442
TYR 135PRO 136 0.0005
PRO 136GLN 137 0.3977
GLN 137GLN 138 0.0005
GLN 138PHE 139 0.0849
PHE 139PRO 140 -0.0002
PRO 140TYR 141 0.0183
TYR 141ALA 142 -0.0001
ALA 142ALA 143 0.1915
ALA 143SER 144 0.0001
SER 144LEU 145 0.2093
LEU 145SER 146 0.0000
SER 146GLY 147 -0.0772
GLY 147PHE 148 0.0005
PHE 148LEU 149 -0.0780
LEU 149ASN 150 0.0000
ASN 150PRO 151 -0.4205
PRO 151SER 152 0.0001
SER 152GLU 153 0.0663
GLU 153SER 154 0.0002
SER 154TRP 155 -0.0047
TRP 155TRP 156 0.0000
TRP 156PRO 157 -0.1819
PRO 157THR 158 -0.0002
THR 158LEU 159 -0.0282
LEU 159ILE 160 -0.0002
ILE 160GLY 161 -0.2402
GLY 161LEU 162 -0.0002
LEU 162ALA 163 -0.1379
ALA 163MET 164 -0.0000
MET 164ASN 165 -0.0421
ASN 165ASP 166 -0.0002
ASP 166SER 167 -0.2173
SER 167GLY 168 0.0003
GLY 168GLY 169 0.0308
GLY 169TYR 170 -0.0001
TYR 170ASN 171 -0.0218
ASN 171ALA 172 0.0002
ALA 172ASN 173 0.0084
ASN 173SER 174 -0.0001
SER 174MET 175 -0.2248
MET 175TRP 176 0.0000
TRP 176GLY 177 0.0953
GLY 177PRO 178 0.0001
PRO 178SER 179 -0.1315
SER 179SER 180 -0.0003
SER 180ASP 181 0.0340
ASP 181PRO 182 0.0002
PRO 182ALA 183 0.1107
ALA 183TRP 184 -0.0003
TRP 184LYS 185 -0.2026
LYS 185ARG 186 -0.0002
ARG 186ASN 187 0.0184
ASN 187ASP 188 0.0005
ASP 188PRO 189 -0.2210
PRO 189MET 190 0.0003
MET 190VAL 191 0.0390
VAL 191GLN 192 0.0000
GLN 192ILE 193 -0.2490
ILE 193PRO 194 -0.0003
PRO 194ARG 195 0.2296
ARG 195LEU 196 -0.0004
LEU 196VAL 197 0.0682
VAL 197ALA 198 -0.0000
ALA 198ASN 199 0.3094
ASN 199ASN 200 -0.0002
ASN 200THR 201 0.0246
THR 201ARG 202 0.0000
ARG 202ILE 203 0.1250
ILE 203TRP 204 0.0001
TRP 204VAL 205 0.1198
VAL 205TYR 206 0.0001
TYR 206CYS 207 0.0202
CYS 207GLY 208 0.0002
GLY 208ASN 209 -0.0068
ASN 209GLY 210 0.0002
GLY 210THR 211 0.0091
THR 211PRO 212 0.0003
PRO 212SER 213 -0.1382
SER 213ASP 214 -0.0000
ASP 214LEU 215 -0.0398
LEU 215GLY 216 0.0002
GLY 216GLY 217 -0.0864
GLY 217ASP 218 -0.0000
ASP 218ASN 219 -0.1146
ASN 219ILE 220 -0.0001
ILE 220PRO 221 0.1138
PRO 221ALA 222 -0.0001
ALA 222LYS 223 0.1380
LYS 223PHE 224 0.0002
PHE 224LEU 225 0.2095
LEU 225GLU 226 0.0002
GLU 226GLY 227 0.1303
GLY 227LEU 228 -0.0000
LEU 228THR 229 0.0519
THR 229LEU 230 0.0001
LEU 230ARG 231 0.1621
ARG 231THR 232 0.0002
THR 232ASN 233 -0.0826
ASN 233GLN 234 -0.0003
GLN 234THR 235 0.0600
THR 235PHE 236 -0.0000
PHE 236ARG 237 -0.1272
ARG 237ASP 238 -0.0000
ASP 238THR 239 0.1659
THR 239TYR 240 0.0001
TYR 240ALA 241 -0.0434
ALA 241ALA 242 -0.0003
ALA 242ASP 243 -0.0218
ASP 243GLY 244 -0.0002
GLY 244GLY 245 0.0317
GLY 245ARG 246 -0.0000
ARG 246ASN 247 0.4556
ASN 247GLY 248 0.0000
GLY 248VAL 249 -0.1620
VAL 249PHE 250 -0.0001
PHE 250ASN 251 -0.1104
ASN 251PHE 252 -0.0000
PHE 252PRO 253 -0.0571
PRO 253PRO 254 -0.0002
PRO 254ASN 255 0.0602
ASN 255GLY 256 0.0001
GLY 256THR 257 0.0802
THR 257HIS 258 0.0003
HIS 258SER 259 0.0979
SER 259TRP 260 -0.0003
TRP 260PRO 261 -0.1644
PRO 261TYR 262 0.0003
TYR 262TRP 263 0.0020
TRP 263ASN 264 -0.0003
ASN 264GLU 265 -0.1137
GLU 265GLN 266 -0.0003
GLN 266LEU 267 0.1160
LEU 267VAL 268 -0.0004
VAL 268ALA 269 0.0654
ALA 269MET 270 -0.0001
MET 270LYS 271 0.0766
LYS 271ALA 272 0.0002
ALA 272ASP 273 0.1084
ASP 273ILE 274 0.0003
ILE 274GLN 275 0.0288
GLN 275HIS 276 0.0005
HIS 276VAL 277 -0.1064
VAL 277LEU 278 -0.0002
LEU 278ASN 279 -0.0516
ASN 279GLY 280 -0.0001

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.