CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1F0N_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091526165245

---  normal mode 16  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1ARG 2 0.0002
ARG 2PRO 3 0.3597
PRO 3GLY 4 0.0002
GLY 4LEU 5 -0.0225
LEU 5PRO 6 0.0000
PRO 6VAL 7 0.1861
VAL 7GLU 8 0.0000
GLU 8TYR 9 0.0077
TYR 9LEU 10 0.0002
LEU 10GLN 11 -0.0374
GLN 11VAL 12 -0.0001
VAL 12PRO 13 -0.1882
PRO 13SER 14 0.0002
SER 14PRO 15 -0.1348
PRO 15SER 16 0.0003
SER 16MET 17 -0.0004
MET 17GLY 18 -0.0001
GLY 18ARG 19 -0.0668
ARG 19ASP 20 -0.0001
ASP 20ILE 21 -0.1603
ILE 21LYS 22 0.0002
LYS 22VAL 23 -0.0202
VAL 23GLN 24 -0.0001
GLN 24PHE 25 -0.0621
PHE 25GLN 26 -0.0002
GLN 26SER 27 -0.0521
SER 27GLY 28 0.0002
GLY 28GLY 29 -0.0699
GLY 29ASN 30 0.0002
ASN 30ASN 31 -0.0320
ASN 31SER 32 0.0001
SER 32PRO 33 -0.0512
PRO 33ALA 34 0.0004
ALA 34VAL 35 -0.2135
VAL 35TYR 36 0.0003
TYR 36LEU 37 -0.2927
LEU 37LEU 38 -0.0001
LEU 38ASP 39 -0.1316
ASP 39GLY 40 0.0004
GLY 40LEU 41 -0.3386
LEU 41ARG 42 0.0003
ARG 42ALA 43 -0.3138
ALA 43GLN 44 0.0000
GLN 44ASP 45 -0.0116
ASP 45ASP 46 0.0000
ASP 46TYR 47 0.1886
TYR 47ASN 48 -0.0000
ASN 48GLY 49 -0.0409
GLY 49TRP 50 0.0002
TRP 50ASP 51 0.2768
ASP 51ILE 52 -0.0002
ILE 52ASN 53 -0.0522
ASN 53THR 54 -0.0002
THR 54PRO 55 0.2300
PRO 55ALA 56 -0.0001
ALA 56PHE 57 -0.0121
PHE 57GLU 58 -0.0001
GLU 58TRP 59 0.1534
TRP 59TYR 60 0.0000
TYR 60TYR 61 0.0076
TYR 61GLN 62 -0.0003
GLN 62SER 63 -0.2663
SER 63GLY 64 -0.0001
GLY 64LEU 65 -0.0301
LEU 65SER 66 0.0001
SER 66ILE 67 -0.1417
ILE 67VAL 68 -0.0004
VAL 68MET 69 -0.1618
MET 69PRO 70 -0.0003
PRO 70VAL 71 0.0972
VAL 71GLY 72 0.0003
GLY 72GLY 73 0.1040
GLY 73GLN 74 0.0002
GLN 74SER 75 0.0510
SER 75SER 76 0.0004
SER 76PHE 77 0.1950
PHE 77TYR 78 -0.0002
TYR 78SER 79 -0.2105
SER 79ASP 80 -0.0001
ASP 80TRP 81 -0.1935
TRP 81TYR 82 -0.0003
TYR 82SER 83 -0.1341
SER 83PRO 84 -0.0002
PRO 84ALA 85 0.0304
ALA 85CYS 86 -0.0002
CYS 86GLY 87 -0.0720
GLY 87LYS 88 -0.0000
LYS 88ALA 89 0.0169
ALA 89GLY 90 -0.0003
GLY 90CYS 91 -0.0526
CYS 91GLN 92 -0.0000
GLN 92THR 93 -0.0380
THR 93TYR 94 -0.0000
TYR 94LYS 95 0.0194
LYS 95TRP 96 0.0001
TRP 96GLU 97 0.3593
GLU 97THR 98 0.0002
THR 98PHE 99 0.0588
PHE 99LEU 100 0.0000
LEU 100THR 101 0.1164
THR 101SER 102 -0.0001
SER 102GLU 103 0.3624
GLU 103LEU 104 0.0002
LEU 104PRO 105 0.0931
PRO 105GLN 106 -0.0001
GLN 106TRP 107 0.0580
TRP 107LEU 108 -0.0001
LEU 108SER 109 0.0006
SER 109ALA 110 0.0002
ALA 110ASN 111 -0.0422
ASN 111ARG 112 0.0000
ARG 112ALA 113 0.0203
ALA 113VAL 114 -0.0002
VAL 114LYS 115 -0.0440
LYS 115PRO 116 0.0000
PRO 116THR 117 0.2698
THR 117GLY 118 -0.0001
GLY 118SER 119 -0.0668
SER 119ALA 120 -0.0000
ALA 120ALA 121 -0.3259
ALA 121ILE 122 0.0001
ILE 122GLY 123 -0.3515
GLY 123LEU 124 0.0000
LEU 124SER 125 0.0133
SER 125MET 126 -0.0002
MET 126ALA 127 -0.0439
ALA 127GLY 128 0.0005
GLY 128SER 129 -0.0880
SER 129SER 130 0.0004
SER 130ALA 131 -0.0502
ALA 131MET 132 -0.0001
MET 132ILE 133 -0.1716
ILE 133LEU 134 0.0003
LEU 134ALA 135 0.2679
ALA 135ALA 136 0.0001
ALA 136TYR 137 0.2381
TYR 137HIS 138 -0.0000
HIS 138PRO 139 0.1203
PRO 139GLN 140 0.0002
GLN 140GLN 141 0.3632
GLN 141PHE 142 0.0004
PHE 142ILE 143 0.3444
ILE 143TYR 144 0.0001
TYR 144ALA 145 -0.2994
ALA 145GLY 146 0.0003
GLY 146SER 147 -0.2122
SER 147LEU 148 -0.0001
LEU 148SER 149 -0.2516
SER 149ALA 150 -0.0003
ALA 150LEU 151 -0.3405
LEU 151LEU 152 0.0001
LEU 152ASP 153 0.0299
ASP 153PRO 154 0.0001
PRO 154SER 155 -0.0344
SER 155GLN 156 -0.0001
GLN 156GLY 157 0.0456
GLY 157MET 158 -0.0003
MET 158GLY 159 0.0589
GLY 159PRO 160 0.0002
PRO 160SER 161 0.0729
SER 161LEU 162 -0.0000
LEU 162ILE 163 -0.0887
ILE 163GLY 164 -0.0003
GLY 164LEU 165 0.2743
LEU 165ALA 166 -0.0003
ALA 166MET 167 -0.0686
MET 167GLY 168 0.0002
GLY 168ASP 169 0.0104
ASP 169ALA 170 0.0001
ALA 170GLY 171 0.0658
GLY 171GLY 172 -0.0003
GLY 172TYR 173 -0.0676
TYR 173LYS 174 -0.0000
LYS 174ALA 175 -0.1731
ALA 175ALA 176 0.0002
ALA 176ASP 177 -0.1275
ASP 177MET 178 0.0002
MET 178TRP 179 -0.0433
TRP 179GLY 180 -0.0001
GLY 180PRO 181 -0.1978
PRO 181SER 182 0.0002
SER 182SER 183 0.0466
SER 183ASP 184 0.0001
ASP 184PRO 185 -0.0451
PRO 185ALA 186 -0.0001
ALA 186TRP 187 0.0064
TRP 187GLU 188 -0.0001
GLU 188ARG 189 0.0162
ARG 189ASN 190 -0.0001
ASN 190ASP 191 0.1603
ASP 191PRO 192 -0.0001
PRO 192THR 193 0.2600
THR 193GLN 194 0.0000
GLN 194GLN 195 0.0069
GLN 195ILE 196 -0.0002
ILE 196PRO 197 -0.0875
PRO 197LYS 198 0.0001
LYS 198LEU 199 -0.0976
LEU 199VAL 200 0.0002
VAL 200ALA 201 0.0198
ALA 201ASN 202 0.0002
ASN 202ASN 203 -0.0205
ASN 203THR 204 -0.0002
THR 204ARG 205 -0.2415
ARG 205LEU 206 -0.0001
LEU 206TRP 207 -0.2197
TRP 207VAL 208 0.0000
VAL 208TYR 209 -0.3966
TYR 209CYS 210 0.0003
CYS 210GLY 211 -0.1675
GLY 211ASN 212 -0.0003
ASN 212GLY 213 0.0161
GLY 213THR 214 0.0001
THR 214PRO 215 0.1098
PRO 215ASN 216 0.0002
ASN 216GLU 217 0.1779
GLU 217LEU 218 -0.0003
LEU 218GLY 219 0.4775
GLY 219GLY 220 0.0000
GLY 220ALA 221 -0.4836
ALA 221ASN 222 -0.0000
ASN 222ILE 223 -0.1363
ILE 223PRO 224 -0.0003
PRO 224ALA 225 -0.2460
ALA 225GLU 226 -0.0002
GLU 226PHE 227 -0.0637
PHE 227LEU 228 0.0001
LEU 228GLU 229 -0.0931
GLU 229ASN 230 0.0002
ASN 230PHE 231 0.0878
PHE 231VAL 232 0.0002
VAL 232ARG 233 -0.0316
ARG 233SER 234 0.0003
SER 234SER 235 0.2219
SER 235ASN 236 -0.0002
ASN 236LEU 237 0.1860
LEU 237LYS 238 -0.0003
LYS 238PHE 239 -0.0059
PHE 239GLN 240 0.0001
GLN 240ASP 241 0.2686
ASP 241ALA 242 -0.0001
ALA 242TYR 243 0.0402
TYR 243ASN 244 0.0003
ASN 244ALA 245 0.1463
ALA 245ALA 246 -0.0002
ALA 246GLY 247 0.1781
GLY 247GLY 248 0.0001
GLY 248HIS 249 0.1116
HIS 249ASN 250 -0.0002
ASN 250ALA 251 -0.3731
ALA 251VAL 252 0.0001
VAL 252PHE 253 -0.2291
PHE 253ASN 254 0.0000
ASN 254PHE 255 -0.2421
PHE 255PRO 256 0.0003
PRO 256PRO 257 -0.1156
PRO 257ASN 258 0.0004
ASN 258GLY 259 0.0322
GLY 259THR 260 0.0000
THR 260HIS 261 -0.0684
HIS 261SER 262 0.0003
SER 262TRP 263 0.0464
TRP 263GLU 264 -0.0000
GLU 264TYR 265 0.0561
TYR 265TRP 266 0.0002
TRP 266GLY 267 0.1163
GLY 267ALA 268 -0.0001
ALA 268GLN 269 -0.0987
GLN 269LEU 270 0.0000
LEU 270ASN 271 -0.0379
ASN 271ALA 272 0.0002
ALA 272MET 273 0.0017
MET 273LYS 274 -0.0000
LYS 274GLY 275 -0.0487
GLY 275ASP 276 0.0000
ASP 276LEU 277 0.1273
LEU 277GLN 278 -0.0001
GLN 278SER 279 -0.0092
SER 279SER 280 -0.0005
SER 280LEU 281 0.1348
LEU 281GLY 282 -0.0001
GLY 282ALA 283 -0.0340
ALA 283GLY 284 -0.0001

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.