This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PHE 1
ALA 2
0.0038
ALA 2
SER 3
0.0312
SER 3
LYS 4
-0.1357
LYS 4
GLU 5
0.0471
GLU 5
TYR 6
-0.0456
TYR 6
GLY 7
0.2223
GLY 7
VAL 8
0.1329
VAL 8
THR 9
-0.0489
THR 9
ILE 10
-0.0151
ILE 10
GLY 11
0.0264
GLY 11
GLU 12
-0.0642
GLU 12
SER 13
0.0732
SER 13
ARG 14
0.0471
ARG 14
ILE 15
0.0103
ILE 15
ILE 16
-0.1245
ILE 16
TYR 17
0.0389
TYR 17
PRO 18
-0.0027
PRO 18
LEU 19
-0.0065
LEU 19
ASP 20
0.0083
ASP 20
ALA 21
0.0130
ALA 21
ALA 22
-0.0467
ALA 22
GLY 23
-0.0503
GLY 23
VAL 24
0.0053
VAL 24
MET 25
-0.0011
MET 25
VAL 26
-0.0357
VAL 26
SER 27
0.0228
SER 27
SER 28
-0.0517
SER 28
VAL 29
0.0001
VAL 29
VAL 30
0.0209
VAL 30
VAL 31
-0.0167
VAL 31
LYS 32
0.0353
LYS 32
ASN 33
-0.0120
ASN 33
THR 34
0.0290
THR 34
GLN 35
0.0336
GLN 35
ASP 36
-0.0334
ASP 36
TYR 37
-0.0046
TYR 37
PRO 38
0.0167
PRO 38
VAL 39
-0.0290
VAL 39
LEU 40
-0.0202
LEU 40
ILE 41
0.0062
ILE 41
GLN 42
0.0325
GLN 42
SER 43
-0.0383
SER 43
ARG 44
0.0624
ARG 44
ILE 45
0.0235
ILE 45
TYR 46
-0.0034
TYR 46
ASP 47
-0.0035
ASP 47
PRO 48
-0.0096
PRO 48
PHE 49
0.0062
PHE 49
VAL 50
0.0194
VAL 50
VAL 51
0.0600
VAL 51
VAL 52
0.0653
VAL 52
THR 53
0.0014
THR 53
PRO 54
0.0762
PRO 54
PRO 55
-0.0336
PRO 55
LEU 56
0.0263
LEU 56
PHE 57
0.0016
PHE 57
ARG 58
0.0458
ARG 58
LEU 59
-0.0057
LEU 59
ASP 60
0.0108
ASP 60
ALA 61
0.0001
ALA 61
LYS 62
-0.0054
LYS 62
GLN 63
0.0260
GLN 63
GLN 64
0.0286
GLN 64
ASN 65
0.0462
ASN 65
SER 66
0.0129
SER 66
SER 67
0.0193
SER 67
LEU 68
0.0016
LEU 68
ARG 69
0.0188
ARG 69
ILE 70
0.0254
ILE 70
ALA 71
0.0197
ALA 71
GLN 72
0.0427
GLN 72
ALA 73
-0.0058
ALA 73
GLY 74
0.0302
GLY 74
GLY 75
0.0283
GLY 75
VAL 76
0.0403
VAL 76
PHE 77
-0.0167
PHE 77
PRO 78
0.0897
PRO 78
ARG 79
0.0103
ARG 79
ASP 80
-0.0572
ASP 80
LYS 81
-0.0189
LYS 81
GLU 82
-0.0015
GLU 82
SER 83
0.0663
SER 83
LEU 84
-0.0293
LEU 84
LYS 85
0.0771
LYS 85
TRP 86
0.0071
TRP 86
LEU 87
0.0830
LEU 87
CYS 88
-0.0472
CYS 88
VAL 89
0.0343
VAL 89
LYS 90
-0.1181
LYS 90
GLY 91
-0.0017
GLY 91
ILE 92
0.0032
ILE 92
PRO 93
-0.0369
PRO 93
LYS 94
-0.0593
LYS 94
ASP 95
0.1686
ASP 95
VAL 96
0.0281
VAL 96
GLY 97
0.0410
GLY 97
VAL 98
0.0940
VAL 98
PHE 99
0.0094
PHE 99
VAL 100
-0.0786
VAL 100
GLN 101
-0.0677
GLN 101
PHE 102
-0.2518
PHE 102
ALA 103
-0.0608
ALA 103
ILE 104
-0.1528
ILE 104
ASN 105
-0.0623
ASN 105
ASN 106
-0.1086
ASN 106
CYS 107
-0.0050
CYS 107
ILE 108
-0.1389
ILE 108
LYS 109
0.0297
LYS 109
LEU 110
0.0281
LEU 110
LEU 111
-0.0354
LEU 111
VAL 112
-0.0212
VAL 112
ARG 113
0.0224
ARG 113
PRO 114
0.0036
PRO 114
ASN 115
-0.0093
ASN 115
GLU 116
-0.0602
GLU 116
LEU 117
0.0312
LEU 117
LYS 118
0.0403
LYS 118
GLY 119
0.0571
GLY 119
THR 120
0.0630
THR 120
PRO 121
0.0303
PRO 121
ILE 122
0.0591
ILE 122
GLN 123
-0.0415
GLN 123
PHE 124
0.0098
PHE 124
ALA 125
0.0614
ALA 125
GLU 126
-0.0171
GLU 126
ASN 127
0.0309
ASN 127
LEU 128
-0.0166
LEU 128
SER 129
-0.0335
SER 129
TRP 130
-0.0186
TRP 130
LYS 131
-0.0395
LYS 131
VAL 132
-0.0236
VAL 132
ASP 133
-0.0174
ASP 133
GLY 134
-0.0235
GLY 134
GLY 135
0.0098
GLY 135
LYS 136
-0.0006
LYS 136
LEU 137
-0.0081
LEU 137
ILE 138
-0.0290
ILE 138
ALA 139
-0.0055
ALA 139
GLU 140
-0.0301
GLU 140
ASN 141
-0.0185
ASN 141
PRO 142
-0.0053
PRO 142
SER 143
-0.0401
SER 143
PRO 144
0.0072
PRO 144
PHE 145
-0.0085
PHE 145
TYR 146
0.0170
TYR 146
MET 147
0.0053
MET 147
ASN 148
-0.0069
ASN 148
ILE 149
0.0009
ILE 149
GLY 150
-0.0136
GLY 150
GLU 151
0.0185
GLU 151
LEU 152
0.0359
LEU 152
THR 153
-0.0048
THR 153
PHE 154
0.0120
PHE 154
GLY 155
0.0014
GLY 155
GLY 156
-0.0069
GLY 156
LYS 157
-0.0073
LYS 157
SER 158
-0.0005
SER 158
ILE 159
-0.0143
ILE 159
PRO 160
-0.0070
PRO 160
SER 161
0.0378
SER 161
HIS 162
-0.0464
HIS 162
TYR 163
-0.0195
TYR 163
ILE 164
0.0037
ILE 164
PRO 165
-0.0243
PRO 165
PRO 166
-0.0486
PRO 166
LYS 167
0.0492
LYS 167
SER 168
-0.1021
SER 168
THR 169
-0.0506
THR 169
TRP 170
-0.0172
TRP 170
ALA 171
-0.0082
ALA 171
PHE 172
-0.0357
PHE 172
ASP 173
0.0137
ASP 173
LEU 174
-0.0147
LEU 174
PRO 175
0.0002
PRO 175
ASN 176
-0.0061
ASN 176
VAL 177
-0.0054
VAL 177
SER 178
-0.0074
SER 178
TRP 179
-0.0024
TRP 179
ARG 180
-0.0090
ARG 180
ILE 181
0.0215
ILE 181
ILE 182
-0.0699
ILE 182
ASN 183
0.0617
ASN 183
ASP 184
0.0575
ASP 184
GLN 185
0.0227
GLN 185
GLY 186
-0.0286
GLY 186
GLY 187
-0.1105
GLY 187
LEU 188
-0.0367
LEU 188
ASP 189
-0.0015
ASP 189
ARG 190
-0.0458
ARG 190
LEU 191
-0.0238
LEU 191
TYR 192
0.0131
TYR 192
SER 193
-0.0511
SER 193
LYS 194
-0.0189
LYS 194
ASN 195
-0.0129
ASN 195
VAL 196
-0.0086
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.