This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLY 2
0.0206
GLY 2
ASN 3
0.0284
ASN 3
GLU 4
0.0136
GLU 4
GLY 5
0.0407
GLY 5
VAL 6
0.0161
VAL 6
ILE 7
0.0236
ILE 7
ILE 8
0.0045
ILE 8
ASN 9
0.0770
ASN 9
ASN 10
0.0487
ASN 10
PHE 11
0.2525
PHE 11
TYR 12
0.0529
TYR 12
SER 13
0.3990
SER 13
ASN 14
0.1417
ASN 14
GLN 15
0.0185
GLN 15
TYR 16
0.2132
TYR 16
GLN 17
0.1392
GLN 17
ASN 18
-0.0075
ASN 18
SER 19
0.0450
SER 19
ILE 20
0.0415
ILE 20
ASP 21
0.0001
ASP 21
LEU 22
0.0189
LEU 22
SER 23
0.0177
SER 23
ALA 24
0.0074
ALA 24
SER 25
-0.0073
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.