This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLY 2
-0.0545
GLY 2
ASN 3
0.0338
ASN 3
GLU 4
-0.2289
GLU 4
GLY 5
-0.0555
GLY 5
VAL 6
0.1433
VAL 6
ILE 7
-0.0770
ILE 7
ILE 8
-0.0769
ILE 8
ASN 9
0.1226
ASN 9
ASN 10
0.1220
ASN 10
PHE 11
-0.2999
PHE 11
TYR 12
-0.0409
TYR 12
SER 13
0.1866
SER 13
ASN 14
-0.1577
ASN 14
GLN 15
-0.2031
GLN 15
TYR 16
0.1457
TYR 16
GLN 17
0.0334
GLN 17
ASN 18
-0.0799
ASN 18
SER 19
0.0107
SER 19
ILE 20
0.0976
ILE 20
ASP 21
-0.0606
ASP 21
LEU 22
-0.0668
LEU 22
SER 23
0.0277
SER 23
ALA 24
0.0150
ALA 24
SER 25
-0.0279
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.