CNRS Nantes University US2B US2B
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***  EXP_1TME_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000  ***

CA strain for 24021912501950589

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1GLY 2 -0.0545
GLY 2ASN 3 0.0338
ASN 3GLU 4 -0.2289
GLU 4GLY 5 -0.0555
GLY 5VAL 6 0.1433
VAL 6ILE 7 -0.0770
ILE 7ILE 8 -0.0769
ILE 8ASN 9 0.1226
ASN 9ASN 10 0.1220
ASN 10PHE 11 -0.2999
PHE 11TYR 12 -0.0409
TYR 12SER 13 0.1866
SER 13ASN 14 -0.1577
ASN 14GLN 15 -0.2031
GLN 15TYR 16 0.1457
TYR 16GLN 17 0.0334
GLN 17ASN 18 -0.0799
ASN 18SER 19 0.0107
SER 19ILE 20 0.0976
ILE 20ASP 21 -0.0606
ASP 21LEU 22 -0.0668
LEU 22SER 23 0.0277
SER 23ALA 24 0.0150
ALA 24SER 25 -0.0279

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.