CNRS Nantes University US2B US2B
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***  EXP_1TME_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000  ***

CA strain for 24021912501950589

---  normal mode 16  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1GLY 2 -0.3813
GLY 2ASN 3 0.2310
ASN 3GLU 4 -0.0476
GLU 4GLY 5 0.1044
GLY 5VAL 6 -0.0309
VAL 6ILE 7 -0.0448
ILE 7ILE 8 0.1638
ILE 8ASN 9 -0.4083
ASN 9ASN 10 0.0570
ASN 10PHE 11 0.0464
PHE 11TYR 12 0.0036
TYR 12SER 13 0.4093
SER 13ASN 14 0.2864
ASN 14GLN 15 0.1488
GLN 15TYR 16 0.5682
TYR 16GLN 17 0.1954
GLN 17ASN 18 0.0108
ASN 18SER 19 -0.0333
SER 19ILE 20 -0.0537
ILE 20ASP 21 0.0113
ASP 21LEU 22 -0.5614
LEU 22SER 23 -0.1527
SER 23ALA 24 -0.0297
ALA 24SER 25 0.0145

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.