CNRS Nantes University US2B US2B
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***  EXP_1TME_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000  ***

CA strain for 24021912501950589

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1GLY 2 0.0951
GLY 2ASN 3 -0.1751
ASN 3GLU 4 0.6937
GLU 4GLY 5 0.3560
GLY 5VAL 6 -0.4703
VAL 6ILE 7 0.3706
ILE 7ILE 8 0.2444
ILE 8ASN 9 -0.1122
ASN 9ASN 10 0.3196
ASN 10PHE 11 0.3181
PHE 11TYR 12 -0.2077
TYR 12SER 13 0.4487
SER 13ASN 14 0.1389
ASN 14GLN 15 -0.1168
GLN 15TYR 16 0.3599
TYR 16GLN 17 0.0951
GLN 17ASN 18 -0.1622
ASN 18SER 19 0.3525
SER 19ILE 20 -0.2897
ILE 20ASP 21 -0.0821
ASP 21LEU 22 0.2583
LEU 22SER 23 -0.0396
SER 23ALA 24 -0.2308
ALA 24SER 25 0.1224

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.