CNRS Nantes University US2B US2B
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***  EXP_1TME_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000  ***

CA strain for 24021912501950589

---  normal mode 13  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1GLY 2 0.0214
GLY 2ASN 3 0.1443
ASN 3GLU 4 0.0878
GLU 4GLY 5 0.0249
GLY 5VAL 6 0.3047
VAL 6ILE 7 -0.0926
ILE 7ILE 8 -0.1768
ILE 8ASN 9 0.3287
ASN 9ASN 10 0.1002
ASN 10PHE 11 -0.2182
PHE 11TYR 12 0.1729
TYR 12SER 13 0.0486
SER 13ASN 14 -0.2316
ASN 14GLN 15 0.0274
GLN 15TYR 16 0.0553
TYR 16GLN 17 -0.3465
GLN 17ASN 18 -0.0301
ASN 18SER 19 0.2890
SER 19ILE 20 -0.5575
ILE 20ASP 21 0.1280
ASP 21LEU 22 0.2519
LEU 22SER 23 -0.1072
SER 23ALA 24 -0.1775
ALA 24SER 25 0.0736

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.