CNRS Nantes University US2B US2B
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***  EXP_1TME_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000  ***

CA strain for 24021912501950589

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1GLY 2 -0.3062
GLY 2ASN 3 0.1836
ASN 3GLU 4 -0.0681
GLU 4GLY 5 0.0493
GLY 5VAL 6 0.2284
VAL 6ILE 7 0.0036
ILE 7ILE 8 0.1402
ILE 8ASN 9 0.3678
ASN 9ASN 10 0.0559
ASN 10PHE 11 0.2922
PHE 11TYR 12 -0.0099
TYR 12SER 13 -0.0035
SER 13ASN 14 0.0639
ASN 14GLN 15 -0.0800
GLN 15TYR 16 -0.0374
TYR 16GLN 17 -0.0942
GLN 17ASN 18 -0.4620
ASN 18SER 19 -0.2150
SER 19ILE 20 0.0575
ILE 20ASP 21 -0.2233
ASP 21LEU 22 -0.1928
LEU 22SER 23 0.0056
SER 23ALA 24 -0.0046
ALA 24SER 25 -0.0534

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.