This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLY 2
-0.3062
GLY 2
ASN 3
0.1836
ASN 3
GLU 4
-0.0681
GLU 4
GLY 5
0.0493
GLY 5
VAL 6
0.2284
VAL 6
ILE 7
0.0036
ILE 7
ILE 8
0.1402
ILE 8
ASN 9
0.3678
ASN 9
ASN 10
0.0559
ASN 10
PHE 11
0.2922
PHE 11
TYR 12
-0.0099
TYR 12
SER 13
-0.0035
SER 13
ASN 14
0.0639
ASN 14
GLN 15
-0.0800
GLN 15
TYR 16
-0.0374
TYR 16
GLN 17
-0.0942
GLN 17
ASN 18
-0.4620
ASN 18
SER 19
-0.2150
SER 19
ILE 20
0.0575
ILE 20
ASP 21
-0.2233
ASP 21
LEU 22
-0.1928
LEU 22
SER 23
0.0056
SER 23
ALA 24
-0.0046
ALA 24
SER 25
-0.0534
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.