CNRS Nantes University US2B US2B
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***  EXP_1TME_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000  ***

CA strain for 24021912501950589

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1GLY 2 0.1872
GLY 2ASN 3 0.0278
ASN 3GLU 4 -0.0511
GLU 4GLY 5 0.7683
GLY 5VAL 6 0.2161
VAL 6ILE 7 -0.4528
ILE 7ILE 8 0.5948
ILE 8ASN 9 0.0188
ASN 9ASN 10 -0.1394
ASN 10PHE 11 0.1985
PHE 11TYR 12 0.0220
TYR 12SER 13 -0.2060
SER 13ASN 14 0.0991
ASN 14GLN 15 0.0763
GLN 15TYR 16 -0.4829
TYR 16GLN 17 -0.2200
GLN 17ASN 18 0.3816
ASN 18SER 19 -0.4453
SER 19ILE 20 0.1202
ILE 20ASP 21 0.2031
ASP 21LEU 22 -0.1437
LEU 22SER 23 -0.2178
SER 23ALA 24 0.0462
ALA 24SER 25 -0.0058

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.