This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
VAL 1
GLU 2
-0.0269
GLU 2
PRO 3
0.0174
PRO 3
ALA 4
-0.0545
ALA 4
ARG 5
0.1174
ARG 5
ILE 6
0.1433
ILE 6
THR 7
0.0500
THR 7
LEU 8
0.0040
LEU 8
THR 9
0.0105
THR 9
TYR 10
0.0098
TYR 10
LYS 11
-0.0017
LYS 11
GLU 12
0.0001
GLU 12
GLY 13
0.0009
GLY 13
ALA 14
-0.0049
ALA 14
PRO 15
0.0014
PRO 15
ILE 16
0.0011
ILE 16
THR 17
-0.0022
THR 17
ILE 18
-0.0005
ILE 18
MET 19
-0.0001
MET 19
ASP 20
-0.0053
ASP 20
ASN 21
0.0029
ASN 21
GLY 22
0.0024
GLY 22
ASN 23
-0.0018
ASN 23
ILE 24
-0.0059
ILE 24
ASP 25
-0.0019
ASP 25
THR 26
-0.0040
THR 26
GLU 27
-0.0084
GLU 27
LEU 28
0.0025
LEU 28
LEU 29
-0.0089
LEU 29
VAL 30
0.0011
VAL 30
GLY 31
0.0003
GLY 31
THR 32
-0.0049
THR 32
LEU 33
-0.0028
LEU 33
THR 34
-0.0056
THR 34
LEU 35
-0.0108
LEU 35
GLY 36
-0.0265
GLY 36
GLY 37
-0.1814
GLY 37
TYR 38
0.0078
TYR 38
LYS 39
0.0033
LYS 39
THR 40
-0.0305
THR 40
GLY 41
0.0031
GLY 41
THR 42
0.0150
THR 42
THR 43
-0.0157
THR 43
SER 44
-0.0044
SER 44
THR 45
-0.0015
THR 45
SER 46
0.0106
SER 46
VAL 47
-0.0058
VAL 47
ASN 48
0.0044
ASN 48
PHE 49
0.0027
PHE 49
THR 50
-0.0035
THR 50
ASP 51
0.0131
ASP 51
ALA 52
0.0044
ALA 52
ALA 53
0.0023
ALA 53
GLY 54
0.0053
GLY 54
ASP 55
0.0032
ASP 55
PRO 56
-0.0046
PRO 56
MET 57
-0.0027
MET 57
TYR 58
-0.0021
TYR 58
LEU 59
-0.0020
LEU 59
THR 60
0.0038
THR 60
PHE 61
-0.0042
PHE 61
THR 62
0.0015
THR 62
SER 63
0.0041
SER 63
GLN 64
-0.0026
GLN 64
ASP 65
0.0018
ASP 65
GLY 66
-0.0015
GLY 66
ASN 67
-0.0005
ASN 67
ASN 68
0.0015
ASN 68
HIS 69
-0.0019
HIS 69
GLN 70
-0.0012
GLN 70
PHE 71
-0.0076
PHE 71
THR 72
-0.0061
THR 72
THR 73
-0.0022
THR 73
LYS 74
-0.0040
LYS 74
VAL 75
-0.0018
VAL 75
ILE 76
-0.0021
ILE 76
GLY 77
-0.0103
GLY 77
LYS 78
0.0030
LYS 78
ASP 79
-0.0032
ASP 79
SER 80
0.0043
SER 80
ARG 81
-0.0061
ARG 81
ASP 82
0.0016
ASP 82
PHE 83
0.0007
PHE 83
ASP 84
-0.0017
ASP 84
ILE 85
-0.0052
ILE 85
SER 86
-0.0029
SER 86
PRO 87
0.0037
PRO 87
LYS 88
-0.0005
LYS 88
VAL 89
0.0024
VAL 89
ASN 90
-0.0044
ASN 90
GLY 91
-0.0029
GLY 91
GLU 92
-0.0017
GLU 92
ASN 93
-0.0018
ASN 93
LEU 94
0.0046
LEU 94
VAL 95
-0.0032
VAL 95
GLY 96
-0.0067
GLY 96
ASP 97
-0.0069
ASP 97
ASP 98
0.0024
ASP 98
VAL 99
0.0005
VAL 99
VAL 100
-0.0129
VAL 100
LEU 101
0.0038
LEU 101
ALA 102
0.0091
ALA 102
THR 103
-0.0142
THR 103
GLY 104
-0.0065
GLY 104
SER 105
-0.0120
SER 105
GLN 106
-0.0172
GLN 106
ASP 107
-0.0143
ASP 107
PHE 108
-0.0049
PHE 108
PHE 109
-0.0123
PHE 109
VAL 110
-0.0002
VAL 110
ARG 111
-0.0009
ARG 111
SER 112
-0.0080
SER 112
ILE 113
0.0012
ILE 113
GLY 114
0.0018
GLY 114
SER 115
-0.0091
SER 115
LYS 116
0.0078
LYS 116
GLY 117
-0.0062
GLY 117
GLY 118
0.0085
GLY 118
LYS 119
0.0004
LYS 119
LEU 120
0.0026
LEU 120
ALA 121
-0.0070
ALA 121
ALA 122
-0.0002
ALA 122
GLY 123
-0.0007
GLY 123
LYS 124
-0.0002
LYS 124
TYR 125
-0.0024
TYR 125
THR 126
0.0023
THR 126
ASP 127
-0.0015
ASP 127
ALA 128
0.0096
ALA 128
VAL 129
0.0067
VAL 129
THR 130
0.0051
THR 130
VAL 131
0.0287
VAL 131
THR 132
-0.0193
THR 132
VAL 133
0.0219
VAL 133
SER 134
-0.0117
SER 134
ASN 135
0.0039
ASN 135
GLN 136
0.0078
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.