CNRS Nantes University US2B US2B
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***  EXP_1P5V_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000  ***

CA strain for 24021912381935461

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
VAL 1GLU 2 -0.0087
GLU 2PRO 3 -0.1568
PRO 3ALA 4 0.2134
ALA 4ARG 5 0.1321
ARG 5ILE 6 0.1149
ILE 6THR 7 -0.0249
THR 7LEU 8 -0.0394
LEU 8THR 9 -0.0152
THR 9TYR 10 -0.0112
TYR 10LYS 11 0.0495
LYS 11GLU 12 -0.1209
GLU 12GLY 13 -0.0920
GLY 13ALA 14 -0.1513
ALA 14PRO 15 0.0455
PRO 15ILE 16 0.0029
ILE 16THR 17 0.0166
THR 17ILE 18 -0.0127
ILE 18MET 19 0.0206
MET 19ASP 20 -0.1648
ASP 20ASN 21 0.0452
ASN 21GLY 22 0.1321
GLY 22ASN 23 -0.0124
ASN 23ILE 24 -0.0841
ILE 24ASP 25 -0.0475
ASP 25THR 26 -0.1838
THR 26GLU 27 -0.0999
GLU 27LEU 28 -0.1207
LEU 28LEU 29 -0.0649
LEU 29VAL 30 -0.0384
VAL 30GLY 31 -0.0399
GLY 31THR 32 -0.0366
THR 32LEU 33 -0.0335
LEU 33THR 34 -0.0242
THR 34LEU 35 -0.0516
LEU 35GLY 36 -0.0683
GLY 36GLY 37 -0.0721
GLY 37TYR 38 0.0257
TYR 38LYS 39 -0.0119
LYS 39THR 40 0.0177
THR 40GLY 41 0.0042
GLY 41THR 42 0.0642
THR 42THR 43 0.0108
THR 43SER 44 -0.0468
SER 44THR 45 -0.0225
THR 45SER 46 0.0490
SER 46VAL 47 -0.0186
VAL 47ASN 48 0.1283
ASN 48PHE 49 0.0989
PHE 49THR 50 0.0270
THR 50ASP 51 0.2445
ASP 51ALA 52 0.0531
ALA 52ALA 53 0.0465
ALA 53GLY 54 0.3162
GLY 54ASP 55 -0.0465
ASP 55PRO 56 0.0906
PRO 56MET 57 -0.0237
MET 57TYR 58 0.0827
TYR 58LEU 59 -0.0284
LEU 59THR 60 0.2185
THR 60PHE 61 0.0751
PHE 61THR 62 -0.0047
THR 62SER 63 0.1275
SER 63GLN 64 0.0140
GLN 64ASP 65 0.0142
ASP 65GLY 66 -0.0473
GLY 66ASN 67 -0.0415
ASN 67ASN 68 0.0983
ASN 68HIS 69 -0.0828
HIS 69GLN 70 0.1235
GLN 70PHE 71 -0.1325
PHE 71THR 72 0.0182
THR 72THR 73 0.0091
THR 73LYS 74 -0.0831
LYS 74VAL 75 -0.0356
VAL 75ILE 76 -0.0317
ILE 76GLY 77 -0.0892
GLY 77LYS 78 0.0026
LYS 78ASP 79 -0.1162
ASP 79SER 80 -0.0044
SER 80ARG 81 0.0310
ARG 81ASP 82 -0.0393
ASP 82PHE 83 0.0571
PHE 83ASP 84 -0.0784
ASP 84ILE 85 -0.0781
ILE 85SER 86 0.1167
SER 86PRO 87 0.0435
PRO 87LYS 88 0.0041
LYS 88VAL 89 0.1202
VAL 89ASN 90 -0.0191
ASN 90GLY 91 0.1274
GLY 91GLU 92 -0.0479
GLU 92ASN 93 0.0433
ASN 93LEU 94 -0.0405
LEU 94VAL 95 -0.0363
VAL 95GLY 96 -0.0143
GLY 96ASP 97 0.0087
ASP 97ASP 98 0.0564
ASP 98VAL 99 0.0523
VAL 99VAL 100 -0.0440
VAL 100LEU 101 -0.0165
LEU 101ALA 102 0.0650
ALA 102THR 103 -0.0899
THR 103GLY 104 0.0334
GLY 104SER 105 -0.0765
SER 105GLN 106 -0.0161
GLN 106ASP 107 -0.1388
ASP 107PHE 108 0.0082
PHE 108PHE 109 -0.1546
PHE 109VAL 110 -0.0984
VAL 110ARG 111 0.0124
ARG 111SER 112 -0.1909
SER 112ILE 113 0.0976
ILE 113GLY 114 -0.1103
GLY 114SER 115 -0.0499
SER 115LYS 116 0.0105
LYS 116GLY 117 0.0515
GLY 117GLY 118 0.0596
GLY 118LYS 119 0.0650
LYS 119LEU 120 0.0346
LEU 120ALA 121 -0.1274
ALA 121ALA 122 -0.0055
ALA 122GLY 123 0.0231
GLY 123LYS 124 0.0795
LYS 124TYR 125 0.0318
TYR 125THR 126 0.1572
THR 126ASP 127 0.1393
ASP 127ALA 128 0.1416
ALA 128VAL 129 0.0271
VAL 129THR 130 0.1180
THR 130VAL 131 0.1891
VAL 131THR 132 -0.0276
THR 132VAL 133 0.2355
VAL 133SER 134 -0.0865
SER 134ASN 135 0.0902
ASN 135GLN 136 0.1827

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.