This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
VAL 1
GLU 2
-0.0087
GLU 2
PRO 3
-0.1568
PRO 3
ALA 4
0.2134
ALA 4
ARG 5
0.1321
ARG 5
ILE 6
0.1149
ILE 6
THR 7
-0.0249
THR 7
LEU 8
-0.0394
LEU 8
THR 9
-0.0152
THR 9
TYR 10
-0.0112
TYR 10
LYS 11
0.0495
LYS 11
GLU 12
-0.1209
GLU 12
GLY 13
-0.0920
GLY 13
ALA 14
-0.1513
ALA 14
PRO 15
0.0455
PRO 15
ILE 16
0.0029
ILE 16
THR 17
0.0166
THR 17
ILE 18
-0.0127
ILE 18
MET 19
0.0206
MET 19
ASP 20
-0.1648
ASP 20
ASN 21
0.0452
ASN 21
GLY 22
0.1321
GLY 22
ASN 23
-0.0124
ASN 23
ILE 24
-0.0841
ILE 24
ASP 25
-0.0475
ASP 25
THR 26
-0.1838
THR 26
GLU 27
-0.0999
GLU 27
LEU 28
-0.1207
LEU 28
LEU 29
-0.0649
LEU 29
VAL 30
-0.0384
VAL 30
GLY 31
-0.0399
GLY 31
THR 32
-0.0366
THR 32
LEU 33
-0.0335
LEU 33
THR 34
-0.0242
THR 34
LEU 35
-0.0516
LEU 35
GLY 36
-0.0683
GLY 36
GLY 37
-0.0721
GLY 37
TYR 38
0.0257
TYR 38
LYS 39
-0.0119
LYS 39
THR 40
0.0177
THR 40
GLY 41
0.0042
GLY 41
THR 42
0.0642
THR 42
THR 43
0.0108
THR 43
SER 44
-0.0468
SER 44
THR 45
-0.0225
THR 45
SER 46
0.0490
SER 46
VAL 47
-0.0186
VAL 47
ASN 48
0.1283
ASN 48
PHE 49
0.0989
PHE 49
THR 50
0.0270
THR 50
ASP 51
0.2445
ASP 51
ALA 52
0.0531
ALA 52
ALA 53
0.0465
ALA 53
GLY 54
0.3162
GLY 54
ASP 55
-0.0465
ASP 55
PRO 56
0.0906
PRO 56
MET 57
-0.0237
MET 57
TYR 58
0.0827
TYR 58
LEU 59
-0.0284
LEU 59
THR 60
0.2185
THR 60
PHE 61
0.0751
PHE 61
THR 62
-0.0047
THR 62
SER 63
0.1275
SER 63
GLN 64
0.0140
GLN 64
ASP 65
0.0142
ASP 65
GLY 66
-0.0473
GLY 66
ASN 67
-0.0415
ASN 67
ASN 68
0.0983
ASN 68
HIS 69
-0.0828
HIS 69
GLN 70
0.1235
GLN 70
PHE 71
-0.1325
PHE 71
THR 72
0.0182
THR 72
THR 73
0.0091
THR 73
LYS 74
-0.0831
LYS 74
VAL 75
-0.0356
VAL 75
ILE 76
-0.0317
ILE 76
GLY 77
-0.0892
GLY 77
LYS 78
0.0026
LYS 78
ASP 79
-0.1162
ASP 79
SER 80
-0.0044
SER 80
ARG 81
0.0310
ARG 81
ASP 82
-0.0393
ASP 82
PHE 83
0.0571
PHE 83
ASP 84
-0.0784
ASP 84
ILE 85
-0.0781
ILE 85
SER 86
0.1167
SER 86
PRO 87
0.0435
PRO 87
LYS 88
0.0041
LYS 88
VAL 89
0.1202
VAL 89
ASN 90
-0.0191
ASN 90
GLY 91
0.1274
GLY 91
GLU 92
-0.0479
GLU 92
ASN 93
0.0433
ASN 93
LEU 94
-0.0405
LEU 94
VAL 95
-0.0363
VAL 95
GLY 96
-0.0143
GLY 96
ASP 97
0.0087
ASP 97
ASP 98
0.0564
ASP 98
VAL 99
0.0523
VAL 99
VAL 100
-0.0440
VAL 100
LEU 101
-0.0165
LEU 101
ALA 102
0.0650
ALA 102
THR 103
-0.0899
THR 103
GLY 104
0.0334
GLY 104
SER 105
-0.0765
SER 105
GLN 106
-0.0161
GLN 106
ASP 107
-0.1388
ASP 107
PHE 108
0.0082
PHE 108
PHE 109
-0.1546
PHE 109
VAL 110
-0.0984
VAL 110
ARG 111
0.0124
ARG 111
SER 112
-0.1909
SER 112
ILE 113
0.0976
ILE 113
GLY 114
-0.1103
GLY 114
SER 115
-0.0499
SER 115
LYS 116
0.0105
LYS 116
GLY 117
0.0515
GLY 117
GLY 118
0.0596
GLY 118
LYS 119
0.0650
LYS 119
LEU 120
0.0346
LEU 120
ALA 121
-0.1274
ALA 121
ALA 122
-0.0055
ALA 122
GLY 123
0.0231
GLY 123
LYS 124
0.0795
LYS 124
TYR 125
0.0318
TYR 125
THR 126
0.1572
THR 126
ASP 127
0.1393
ASP 127
ALA 128
0.1416
ALA 128
VAL 129
0.0271
VAL 129
THR 130
0.1180
THR 130
VAL 131
0.1891
VAL 131
THR 132
-0.0276
THR 132
VAL 133
0.2355
VAL 133
SER 134
-0.0865
SER 134
ASN 135
0.0902
ASN 135
GLN 136
0.1827
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.