Should you encounter any unexpected behaviour,
please let us know.

* 6y7f_apo *

CA strain for 2402150026362836896

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ASN 16 TRP 17 -0.0004

TRP 17 ILE 18 0.0584

ILE 18 LYS 19 -0.0002

LYS 19 ASP 20 -0.0242

ASP 20 ALA 21 -0.0002

ALA 21 ASP 22 0.0516

ASP 22 PRO 23 -0.0002

PRO 23 ARG 24 0.0462

ARG 24 VAL 25 -0.0002

VAL 25 GLU 26 -0.0259

GLU 26 ASP 27 -0.0000

ASP 27 TRP 28 0.0476

TRP 28 LEU 29 -0.0001

LEU 29 LEU 30 -0.1036

LEU 30 MET 31 0.0005

MET 31 SER 32 0.0428

SER 32 SER 33 0.0001

SER 33 PRO 34 -0.0472

PRO 34 LEU 35 -0.0003

LEU 35 PRO 36 0.0453

PRO 36 GLN 37 0.0002

GLN 37 THR 38 -0.0388

THR 38 ILE 39 0.0001

ILE 39 LEU 40 0.0820

LEU 40 LEU 41 -0.0002

LEU 41 GLY 42 0.0489

GLY 42 PHE 43 0.0001

PHE 43 TYR 44 0.0638

TYR 44 VAL 45 0.0001

VAL 45 TYR 46 0.1125

TYR 46 PHE 47 -0.0001

PHE 47 VAL 48 -0.0240

VAL 48 THR 49 -0.0003

THR 49 SER 50 0.0825

SER 50 LEU 51 -0.0001

LEU 51 GLY 52 -0.0068

GLY 52 PRO 53 -0.0001

PRO 53 LYS 54 0.0377

LYS 54 LEU 55 0.0001

LEU 55 MET 56 -0.0230

MET 56 GLU 57 -0.0001

GLU 57 ASN 58 0.0484

ASN 58 ARG 59 -0.0002

ARG 59 LYS 60 -0.0198

LYS 60 PRO 61 -0.0002

PRO 61 PHE 62 -0.0523

PHE 62 GLU 63 0.0001

GLU 63 LEU 64 -0.0877

LEU 64 LYS 65 0.0003

LYS 65 LYS 66 -0.0148

LYS 66 ALA 67 -0.0003

ALA 67 MET 68 0.0188

MET 68 ILE 69 -0.0001

ILE 69 THR 70 0.0806

THR 70 TYR 71 -0.0002

TYR 71 ASN 72 0.0024

ASN 72 PHE 73 -0.0001

PHE 73 PHE 74 0.1451

PHE 74 ILE 75 0.0000

ILE 75 VAL 76 0.0301

VAL 76 LEU 77 -0.0002

LEU 77 PHE 78 0.1856

PHE 78 SER 79 0.0001

SER 79 VAL 80 0.0081

VAL 80 TYR 81 -0.0001

TYR 81 MET 82 -0.0260

MET 82 CYS 83 0.0002

CYS 83 TYR 84 0.1281

TYR 84 GLU 85 0.0002

GLU 85 PHE 86 -0.0357

PHE 86 VAL 87 0.0000

VAL 87 MET 88 0.0699

MET 88 SER 89 -0.0002

SER 89 GLY 90 0.0256

GLY 90 TRP 91 0.0003

TRP 91 GLY 92 0.0595

GLY 92 ILE 93 0.0000

ILE 93 GLY 94 -0.0561

GLY 94 TYR 95 0.0001

TYR 95 SER 96 0.0090

SER 96 PHE 97 -0.0002

PHE 97 ARG 98 -0.0668

ARG 98 CYS 99 -0.0001

CYS 99 ASP 100 -0.0570

ASP 100 ILE 101 0.0002

ILE 101 VAL 102 0.0133

VAL 102 ASP 103 0.0003

ASP 103 TYR 104 0.0212

TYR 104 SER 105 -0.0002

SER 105 ARG 106 0.0028

ARG 106 SER 107 0.0001

SER 107 PRO 108 0.0134

PRO 108 THR 109 0.0001

THR 109 ALA 110 -0.0051

ALA 110 LEU 111 0.0001

LEU 111 ARG 112 0.0702

ARG 112 MET 113 -0.0002

MET 113 ALA 114 -0.0066

ALA 114 ARG 115 0.0003

ARG 115 THR 116 0.0800

THR 116 CYS 117 0.0000

CYS 117 TRP 118 -0.0229

TRP 118 LEU 119 -0.0001

LEU 119 TYR 120 0.0340

TYR 120 TYR 121 -0.0000

TYR 121 PHE 122 0.0381

PHE 122 SER 123 0.0001

SER 123 LYS 124 -0.0263

LYS 124 PHE 125 0.0000

PHE 125 ILE 126 0.2138

ILE 126 GLU 127 0.0001

GLU 127 LEU 128 -0.0659

LEU 128 LEU 129 -0.0000

LEU 129 ASP 130 -0.0007

ASP 130 THR 131 0.0003

THR 131 ILE 132 0.0224

ILE 132 PHE 133 0.0001

PHE 133 PHE 134 -0.0463

PHE 134 VAL 135 -0.0003

VAL 135 LEU 136 0.0622

LEU 136 ARG 137 -0.0001

ARG 137 LYS 138 -0.0596

LYS 138 LYS 139 -0.0002

LYS 139 ASN 140 -0.0541

ASN 140 SER 141 -0.0001

SER 141 GLN 142 0.0203

GLN 142 VAL 143 -0.0001

VAL 143 THR 144 0.1754

THR 144 PHE 145 0.0000

PHE 145 LEU 146 0.0476

LEU 146 HIS 147 -0.0000

HIS 147 VAL 148 0.0140

VAL 148 PHE 149 0.0001

PHE 149 HIS 150 0.0201

HIS 150 HIS 151 -0.0000

HIS 151 THR 152 0.0384

THR 152 ILE 153 -0.0002

ILE 153 MET 154 0.0167

MET 154 PRO 155 -0.0002

PRO 155 TRP 156 0.0309

TRP 156 THR 157 0.0001

THR 157 TRP 158 -0.0143

TRP 158 TRP 159 0.0001

TRP 159 PHE 160 -0.0070

PHE 160 GLY 161 -0.0001

GLY 161 VAL 162 0.0102

VAL 162 LYS 163 0.0001

LYS 163 PHE 164 0.0044

PHE 164 ALA 165 -0.0002

ALA 165 ALA 166 -0.0153

ALA 166 GLY 167 0.0001

GLY 167 GLY 168 0.0035

GLY 168 LEU 169 0.0000

LEU 169 GLY 170 0.0019

GLY 170 THR 171 -0.0002

THR 171 PHE 172 0.0333

PHE 172 HIS 173 0.0001

HIS 173 ALA 174 -0.0410

ALA 174 LEU 175 -0.0005

LEU 175 LEU 176 0.1827

LEU 176 ASN 177 0.0001

ASN 177 THR 178 -0.0343

THR 178 ALA 179 0.0001

ALA 179 VAL 180 0.1921

VAL 180 HIS 181 -0.0004

HIS 181 VAL 182 -0.0119

VAL 182 VAL 183 -0.0004

VAL 183 MET 184 0.0363

MET 184 TYR 185 -0.0005

TYR 185 SER 186 0.0520

SER 186 TYR 187 -0.0003

TYR 187 TYR 188 -0.0492

TYR 188 GLY 189 -0.0004

GLY 189 LEU 190 0.1011

LEU 190 SER 191 0.0001

SER 191 SER 191 -0.0387

SER 191 ALA 192 -0.0136

ALA 192 LEU 193 0.0001

LEU 193 GLY 194 0.0226

GLY 194 PRO 195 -0.0003

PRO 195 ALA 196 -0.0009

ALA 196 TYR 197 0.0003

TYR 197 GLN 198 -0.0163

GLN 198 LYS 199 -0.0000

LYS 199 TYR 200 -0.0046

TYR 200 LEU 201 -0.0001

LEU 201 TRP 202 -0.0572

TRP 202 TRP 203 -0.0002

TRP 203 LYS 204 0.0016

LYS 204 LYS 205 -0.0000

LYS 205 TYR 206 0.0518

TYR 206 LEU 207 0.0002

LEU 207 THR 208 0.0134

THR 208 SER 209 0.0000

SER 209 LEU 210 0.1673

LEU 210 GLN 211 -0.0002

GLN 211 LEU 212 0.0167

LEU 212 VAL 213 -0.0003

VAL 213 GLN 214 0.0994

GLN 214 PHE 215 -0.0001

PHE 215 VAL 216 0.0035

VAL 216 ILE 217 0.0001

ILE 217 VAL 218 -0.0355

VAL 218 ALA 219 -0.0004

ALA 219 ILE 220 0.0884

ILE 220 HIS 221 0.0003

HIS 221 ILE 222 -0.0043

ILE 222 SER 223 -0.0003

SER 223 GLN 224 0.0804

GLN 224 PHE 225 0.0001

PHE 225 PHE 226 -0.0532

PHE 226 PHE 227 0.0000

PHE 227 MET 228 0.0527

MET 228 GLU 229 0.0000

GLU 229 ASP 230 0.0276

ASP 230 CYS 231 -0.0001

CYS 231 LYS 232 0.0616

LYS 232 TYR 233 0.0000

TYR 233 GLN 234 0.0503

GLN 234 PHE 235 0.0003

PHE 235 PRO 236 -0.0519

PRO 236 VAL 237 -0.0000

VAL 237 PHE 238 0.0381

PHE 238 ALA 239 -0.0002

ALA 239 CYS 240 -0.0028

CYS 240 ILE 241 0.0003

ILE 241 ILE 242 -0.0264

ILE 242 MET 243 0.0000

MET 243 SER 244 0.1080

SER 244 SER 244 0.0019

SER 244 TYR 245 -0.0002

TYR 245 SER 246 -0.0807

SER 246 PHE 247 0.0002

PHE 247 MET 248 0.1797

MET 248 PHE 249 0.0003

PHE 249 LEU 250 -0.0350

LEU 250 LEU 251 -0.0003

LEU 251 LEU 252 0.1105

LEU 252 PHE 253 -0.0001

PHE 253 LEU 254 -0.0237

LEU 254 HIS 255 0.0005

HIS 255 PHE 256 0.0210

PHE 256 TRP 257 0.0001

TRP 257 TYR 258 0.0280

TYR 258 ARG 259 -0.0000

ARG 259 ALA 260 0.0145

ALA 260 TYR 261 -0.0003

TYR 261 THR 262 0.0332

THR 262 LYS 263 0.0001

LYS 263 LYS 263 -0.3008

LYS 263 GLY 264 0.0062

GLY 264 GLN 265 -0.0001

GLN 265 ARG 266 0.0156

ARG 266 LEU 267 -0.0001

LEU 267 PRO 268 0.0376

PRO 268 LYS 269 -0.0003

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 6y7f_apo ***

CA strain for 2402150026362836896

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* 6y7f_apo *