Should you encounter any unexpected behaviour,
please let us know.

* 6y7f_apo *

CA strain for 2402150026362836896

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ASN 16 TRP 17 0.0003

TRP 17 ILE 18 -0.1227

ILE 18 LYS 19 -0.0002

LYS 19 ASP 20 -0.0106

ASP 20 ALA 21 -0.0001

ALA 21 ASP 22 -0.1286

ASP 22 PRO 23 0.0001

PRO 23 ARG 24 -0.1175

ARG 24 VAL 25 -0.0001

VAL 25 GLU 26 0.0595

GLU 26 ASP 27 0.0000

ASP 27 TRP 28 -0.0282

TRP 28 LEU 29 0.0003

LEU 29 LEU 30 0.0614

LEU 30 MET 31 0.0002

MET 31 SER 32 -0.0419

SER 32 SER 33 0.0001

SER 33 PRO 34 0.0290

PRO 34 LEU 35 -0.0004

LEU 35 PRO 36 -0.0376

PRO 36 GLN 37 0.0001

GLN 37 THR 38 -0.0050

THR 38 ILE 39 0.0001

ILE 39 LEU 40 -0.0403

LEU 40 LEU 41 -0.0003

LEU 41 GLY 42 -0.0244

GLY 42 PHE 43 -0.0001

PHE 43 TYR 44 0.0077

TYR 44 VAL 45 -0.0002

VAL 45 TYR 46 0.0740

TYR 46 PHE 47 0.0001

PHE 47 VAL 48 0.0011

VAL 48 THR 49 -0.0000

THR 49 SER 50 0.0282

SER 50 LEU 51 -0.0000

LEU 51 GLY 52 -0.1101

GLY 52 PRO 53 0.0000

PRO 53 LYS 54 -0.0247

LYS 54 LEU 55 -0.0001

LEU 55 MET 56 -0.1141

MET 56 GLU 57 0.0003

GLU 57 ASN 58 0.0791

ASN 58 ARG 59 0.0001

ARG 59 LYS 60 -0.0885

LYS 60 PRO 61 0.0001

PRO 61 PHE 62 -0.0791

PHE 62 GLU 63 -0.0001

GLU 63 LEU 64 -0.1231

LEU 64 LYS 65 -0.0002

LYS 65 LYS 66 0.0514

LYS 66 ALA 67 0.0001

ALA 67 MET 68 -0.0059

MET 68 ILE 69 0.0001

ILE 69 THR 70 0.1595

THR 70 TYR 71 -0.0002

TYR 71 ASN 72 0.0111

ASN 72 PHE 73 -0.0002

PHE 73 PHE 74 0.0498

PHE 74 ILE 75 0.0001

ILE 75 VAL 76 0.0339

VAL 76 LEU 77 0.0001

LEU 77 PHE 78 -0.0176

PHE 78 SER 79 0.0003

SER 79 VAL 80 0.0203

VAL 80 TYR 81 -0.0003

TYR 81 MET 82 0.0355

MET 82 CYS 83 0.0002

CYS 83 TYR 84 -0.0845

TYR 84 GLU 85 0.0004

GLU 85 PHE 86 0.0458

PHE 86 VAL 87 -0.0005

VAL 87 MET 88 -0.0426

MET 88 SER 89 0.0002

SER 89 GLY 90 -0.0056

GLY 90 TRP 91 -0.0003

TRP 91 GLY 92 -0.0123

GLY 92 ILE 93 0.0001

ILE 93 GLY 94 -0.0092

GLY 94 TYR 95 0.0001

TYR 95 SER 96 0.0024

SER 96 PHE 97 0.0005

PHE 97 ARG 98 -0.0138

ARG 98 CYS 99 0.0001

CYS 99 ASP 100 -0.0285

ASP 100 ILE 101 0.0000

ILE 101 VAL 102 0.0307

VAL 102 ASP 103 -0.0000

ASP 103 TYR 104 -0.0230

TYR 104 SER 105 0.0000

SER 105 ARG 106 -0.0040

ARG 106 SER 107 0.0001

SER 107 PRO 108 -0.0188

PRO 108 THR 109 0.0001

THR 109 ALA 110 -0.0032

ALA 110 LEU 111 0.0000

LEU 111 ARG 112 -0.1622

ARG 112 MET 113 0.0002

MET 113 ALA 114 0.0251

ALA 114 ARG 115 -0.0001

ARG 115 THR 116 -0.0899

THR 116 CYS 117 0.0001

CYS 117 TRP 118 0.0224

TRP 118 LEU 119 0.0000

LEU 119 TYR 120 -0.0350

TYR 120 TYR 121 0.0001

TYR 121 PHE 122 -0.0299

PHE 122 SER 123 0.0005

SER 123 LYS 124 0.0214

LYS 124 PHE 125 0.0001

PHE 125 ILE 126 0.0016

ILE 126 GLU 127 0.0002

GLU 127 LEU 128 -0.0613

LEU 128 LEU 129 -0.0000

LEU 129 ASP 130 0.0358

ASP 130 THR 131 -0.0001

THR 131 ILE 132 -0.0065

ILE 132 PHE 133 -0.0000

PHE 133 PHE 134 0.0791

PHE 134 VAL 135 -0.0002

VAL 135 LEU 136 0.0339

LEU 136 ARG 137 -0.0005

ARG 137 LYS 138 -0.1338

LYS 138 LYS 139 0.0001

LYS 139 ASN 140 -0.0516

ASN 140 SER 141 -0.0000

SER 141 GLN 142 0.0044

GLN 142 VAL 143 0.0002

VAL 143 THR 144 0.2454

THR 144 PHE 145 0.0004

PHE 145 LEU 146 -0.0261

LEU 146 HIS 147 -0.0001

HIS 147 VAL 148 0.0954

VAL 148 PHE 149 0.0000

PHE 149 HIS 150 -0.0160

HIS 150 HIS 151 0.0002

HIS 151 THR 152 0.0159

THR 152 ILE 153 0.0002

ILE 153 MET 154 0.0273

MET 154 PRO 155 0.0001

PRO 155 TRP 156 -0.0297

TRP 156 THR 157 -0.0001

THR 157 TRP 158 -0.0267

TRP 158 TRP 159 0.0000

TRP 159 PHE 160 0.0336

PHE 160 GLY 161 -0.0002

GLY 161 VAL 162 -0.0037

VAL 162 LYS 163 0.0000

LYS 163 PHE 164 0.0232

PHE 164 ALA 165 -0.0003

ALA 165 ALA 166 -0.0312

ALA 166 GLY 167 0.0000

GLY 167 GLY 168 0.0427

GLY 168 LEU 169 0.0001

LEU 169 GLY 170 0.0321

GLY 170 THR 171 -0.0001

THR 171 PHE 172 -0.1032

PHE 172 HIS 173 0.0005

HIS 173 ALA 174 0.0357

ALA 174 LEU 175 0.0001

LEU 175 LEU 176 -0.2875

LEU 176 ASN 177 -0.0001

ASN 177 THR 178 0.0149

THR 178 ALA 179 -0.0000

ALA 179 VAL 180 -0.2675

VAL 180 HIS 181 0.0003

HIS 181 VAL 182 0.0496

VAL 182 VAL 183 0.0001

VAL 183 MET 184 -0.0263

MET 184 TYR 185 -0.0000

TYR 185 SER 186 0.0455

SER 186 TYR 187 -0.0002

TYR 187 TYR 188 -0.1038

TYR 188 GLY 189 0.0003

GLY 189 LEU 190 0.1667

LEU 190 SER 191 0.0002

SER 191 SER 191 0.0052

SER 191 ALA 192 0.0061

ALA 192 LEU 193 0.0001

LEU 193 GLY 194 0.1473

GLY 194 PRO 195 -0.0002

PRO 195 ALA 196 -0.0268

ALA 196 TYR 197 0.0001

TYR 197 GLN 198 -0.0897

GLN 198 LYS 199 0.0002

LYS 199 TYR 200 -0.0548

TYR 200 LEU 201 -0.0000

LEU 201 TRP 202 -0.0860

TRP 202 TRP 203 -0.0001

TRP 203 LYS 204 0.0252

LYS 204 LYS 205 -0.0001

LYS 205 TYR 206 -0.0844

TYR 206 LEU 207 0.0001

LEU 207 THR 208 0.0639

THR 208 SER 209 -0.0000

SER 209 LEU 210 -0.3785

LEU 210 GLN 211 -0.0003

GLN 211 LEU 212 0.0018

LEU 212 VAL 213 0.0004

VAL 213 GLN 214 -0.1970

GLN 214 PHE 215 -0.0002

PHE 215 VAL 216 0.0727

VAL 216 ILE 217 0.0001

ILE 217 VAL 218 0.0636

VAL 218 ALA 219 0.0000

ALA 219 ILE 220 -0.0565

ILE 220 HIS 221 0.0001

HIS 221 ILE 222 0.0119

ILE 222 SER 223 0.0002

SER 223 GLN 224 -0.0203

GLN 224 PHE 225 -0.0003

PHE 225 PHE 226 -0.0164

PHE 226 PHE 227 -0.0003

PHE 227 MET 228 0.0658

MET 228 GLU 229 -0.0002

GLU 229 ASP 230 0.0301

ASP 230 CYS 231 0.0000

CYS 231 LYS 232 0.0845

LYS 232 TYR 233 0.0003

TYR 233 GLN 234 0.0592

GLN 234 PHE 235 -0.0001

PHE 235 PRO 236 0.0032

PRO 236 VAL 237 0.0001

VAL 237 PHE 238 -0.0306

PHE 238 ALA 239 0.0000

ALA 239 CYS 240 0.0212

CYS 240 ILE 241 -0.0001

ILE 241 ILE 242 0.0255

ILE 242 MET 243 -0.0003

MET 243 SER 244 -0.0618

SER 244 SER 244 0.0131

SER 244 TYR 245 0.0003

TYR 245 SER 246 0.0622

SER 246 PHE 247 0.0003

PHE 247 MET 248 -0.0905

MET 248 PHE 249 -0.0003

PHE 249 LEU 250 0.0452

LEU 250 LEU 251 0.0001

LEU 251 LEU 252 0.0488

LEU 252 PHE 253 0.0001

PHE 253 LEU 254 0.1046

LEU 254 HIS 255 -0.0000

HIS 255 PHE 256 -0.0311

PHE 256 TRP 257 0.0002

TRP 257 TYR 258 -0.1499

TYR 258 ARG 259 -0.0002

ARG 259 ALA 260 -0.0366

ALA 260 TYR 261 0.0002

TYR 261 THR 262 0.0236

THR 262 LYS 263 -0.0001

LYS 263 LYS 263 -0.4689

LYS 263 GLY 264 0.0795

GLY 264 GLN 265 0.0003

GLN 265 ARG 266 0.1637

ARG 266 LEU 267 -0.0002

LEU 267 PRO 268 -0.0163

PRO 268 LYS 269 -0.0003

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 6y7f_apo ***

CA strain for 2402150026362836896

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* 6y7f_apo *