This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0451
VAL 2
PHE 3
0.0996
PHE 3
GLY 4
-0.0406
GLY 4
ARG 5
-0.4169
ARG 5
CYS 6
0.3742
CYS 6
GLU 7
-0.5724
GLU 7
LEU 8
0.1510
LEU 8
ALA 9
-0.1738
ALA 9
ALA 10
-0.1334
ALA 10
ALA 11
-0.2195
ALA 11
MET 12
0.1619
MET 12
LYS 13
-0.1440
LYS 13
ARG 14
-0.1868
ARG 14
HIS 15
0.2106
HIS 15
GLY 16
-0.3381
GLY 16
LEU 17
-0.0932
LEU 17
ASP 18
-0.1836
ASP 18
ASN 19
0.1299
ASN 19
TYR 20
-0.2668
TYR 20
ARG 21
0.1714
ARG 21
GLY 22
0.0429
GLY 22
TYR 23
0.0799
TYR 23
SER 24
0.3137
SER 24
LEU 25
-0.0240
LEU 25
GLY 26
-0.0678
GLY 26
ASN 27
0.1222
ASN 27
TRP 28
-0.1884
TRP 28
VAL 29
0.2722
VAL 29
CYS 30
-0.1236
CYS 30
ALA 31
-0.0999
ALA 31
ALA 32
-0.0153
ALA 32
LYS 33
-0.0470
LYS 33
PHE 34
0.0316
PHE 34
GLU 35
-0.3827
GLU 35
SER 36
0.0899
SER 36
ASN 37
-0.1709
ASN 37
PHE 38
0.0681
PHE 38
ASN 39
-0.1347
ASN 39
THR 40
-0.0777
THR 40
GLN 41
-0.0278
GLN 41
ALA 42
0.1474
ALA 42
THR 43
0.1659
THR 43
ASN 44
0.2839
ASN 44
ARG 45
0.3517
ARG 45
ASN 46
0.0238
ASN 46
THR 47
0.5219
THR 47
ASP 48
-0.2529
ASP 48
GLY 49
0.3929
GLY 49
SER 50
0.0117
SER 50
THR 51
0.1968
THR 51
ASP 52
-0.1685
ASP 52
TYR 53
0.3536
TYR 53
GLY 54
0.1122
GLY 54
ILE 55
-0.0652
ILE 55
LEU 56
0.0437
LEU 56
GLN 57
0.2118
GLN 57
ILE 58
-0.2512
ILE 58
ASN 59
0.2515
ASN 59
SER 60
-0.1411
SER 60
ARG 61
0.2372
ARG 61
TRP 62
-0.2359
TRP 62
TRP 63
0.1686
TRP 63
CYS 64
-0.2751
CYS 64
ASN 65
-0.1413
ASN 65
ASP 66
-0.1043
ASP 66
GLY 67
-0.1469
GLY 67
ARG 68
-0.0803
ARG 68
THR 69
-0.2057
THR 69
PRO 70
0.3316
PRO 70
GLY 71
-0.7915
GLY 71
SER 72
0.2865
SER 72
ARG 73
-0.2781
ARG 73
ASN 74
-0.2254
ASN 74
LEU 75
-0.0180
LEU 75
CYS 76
0.1302
CYS 76
ASN 77
-0.1926
ASN 77
ILE 78
0.2333
ILE 78
PRO 79
-0.1140
PRO 79
CYS 80
-0.0367
CYS 80
SER 81
0.0639
SER 81
ALA 82
-0.0079
ALA 82
LEU 83
-0.1149
LEU 83
LEU 84
-0.0190
LEU 84
SER 85
0.2695
SER 85
SER 86
0.3783
SER 86
ASP 87
0.0435
ASP 87
ILE 88
-0.1347
ILE 88
THR 89
0.1140
THR 89
ALA 90
0.1839
ALA 90
SER 91
-0.1122
SER 91
VAL 92
-0.1921
VAL 92
ASN 93
0.1235
ASN 93
CYS 94
0.1721
CYS 94
ALA 95
-0.2893
ALA 95
LYS 96
-0.1023
LYS 96
LYS 97
0.1510
LYS 97
ILE 98
-0.2488
ILE 98
VAL 99
-0.2298
VAL 99
SER 100
-0.1626
SER 100
ASP 101
0.1421
ASP 101
GLY 102
-0.4396
GLY 102
ASN 103
-0.2575
ASN 103
GLY 104
0.3886
GLY 104
MET 105
0.1171
MET 105
ASN 106
0.0304
ASN 106
ALA 107
0.1692
ALA 107
TRP 108
-0.1941
TRP 108
VAL 109
-0.2276
VAL 109
ALA 110
-0.0463
ALA 110
TRP 111
0.0907
TRP 111
ARG 112
0.0570
ARG 112
ASN 113
-0.1949
ASN 113
ARG 114
-0.0411
ARG 114
CYS 115
0.2824
CYS 115
LYS 116
-0.2629
LYS 116
GLY 117
0.0380
GLY 117
THR 118
-0.1831
THR 118
ASP 119
0.1397
ASP 119
VAL 120
-0.2548
VAL 120
GLN 121
0.1703
GLN 121
ALA 122
0.0575
ALA 122
TRP 123
-0.1750
TRP 123
ILE 124
0.1584
ILE 124
ARG 125
0.1667
ARG 125
GLY 126
0.1635
GLY 126
CYS 127
-0.1518
CYS 127
ARG 128
0.4773
ARG 128
LEU 129
-0.1489
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.