This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASN 106
GLU 107
-0.0005
GLU 107
PRO 108
-0.0025
PRO 108
VAL 109
0.0841
VAL 109
PHE 110
0.1864
PHE 110
THR 111
-0.0753
THR 111
GLN 112
-0.0072
GLN 112
ASP 113
-0.0595
ASP 113
VAL 114
0.1583
VAL 114
PHE 115
-0.0247
PHE 115
VAL 116
0.2408
VAL 116
GLY 117
0.1781
GLY 117
SER 118
0.2374
SER 118
VAL 119
0.1493
VAL 119
GLU 120
0.0478
GLU 120
GLU 121
0.0060
GLU 121
LEU 122
0.0187
LEU 122
SER 123
-0.0611
SER 123
ALA 124
0.0087
ALA 124
ALA 125
-0.0425
ALA 125
HIS 126
-0.0754
HIS 126
THR 127
-0.0843
THR 127
LEU 128
0.1290
LEU 128
VAL 129
-0.0487
VAL 129
MET 130
0.1609
MET 130
LYS 131
0.0308
LYS 131
ILE 132
0.1216
ILE 132
ASN 133
0.0861
ASN 133
ALA 134
0.0747
ALA 134
THR 135
0.0104
THR 135
ASP 136
-0.0096
ASP 136
ALA 137
0.0118
ALA 137
ASP 138
-0.0220
ASP 138
GLU 139
0.0853
GLU 139
PRO 140
0.0124
PRO 140
ASN 141
-0.0274
ASN 141
THR 142
0.0780
THR 142
LEU 143
0.1371
LEU 143
ASN 144
-0.0752
ASN 144
SER 145
-0.0623
SER 145
LYS 146
0.0098
LYS 146
ILE 147
-0.1293
ILE 147
SER 148
-0.0182
SER 148
TYR 149
-0.0648
TYR 149
ARG 150
0.0381
ARG 150
ILE 151
-0.0630
ILE 151
VAL 152
-0.0971
VAL 152
SER 153
-0.0364
SER 153
LEU 154
-0.0850
LEU 154
GLU 155
0.0133
GLU 155
PRO 156
-0.0194
PRO 156
ALA 157
-0.0627
ALA 157
TYR 158
-0.1209
TYR 158
PRO 159
0.0060
PRO 159
PRO 160
0.0124
PRO 160
VAL 161
0.0144
VAL 161
PHE 162
-0.0966
PHE 162
TYR 163
0.0730
TYR 163
LEU 164
-0.2692
LEU 164
ASN 165
0.1082
ASN 165
LYS 166
-0.3342
LYS 166
ASP 167
0.0133
ASP 167
THR 168
-0.0975
THR 168
GLY 169
0.0272
GLY 169
GLU 170
-0.0342
GLU 170
ILE 171
0.0019
ILE 171
TYR 172
0.0326
TYR 172
THR 173
-0.0807
THR 173
THR 174
0.0665
THR 174
SER 175
-0.1042
SER 175
VAL 176
0.0479
VAL 176
THR 177
-0.0359
THR 177
LEU 178
0.0522
LEU 178
ASP 179
-0.0543
ASP 179
ARG 180
0.0146
ARG 180
GLU 181
0.0112
GLU 181
GLU 182
-0.0124
GLU 182
HIS 183
0.0267
HIS 183
SER 184
-0.0177
SER 184
SER 185
0.1280
SER 185
TYR 186
0.0023
TYR 186
THR 187
0.1036
THR 187
LEU 188
0.0682
LEU 188
THR 189
0.0856
THR 189
VAL 190
0.0090
VAL 190
GLU 191
0.0717
GLU 191
ALA 192
-0.0602
ALA 192
ARG 193
0.1231
ARG 193
ASP 194
0.0496
ASP 194
GLY 195
0.0836
GLY 195
ASN 196
-0.0196
ASN 196
GLY 197
0.0387
GLY 197
GLU 198
-0.1159
GLU 198
VAL 199
0.1010
VAL 199
THR 200
-0.1208
THR 200
ASP 201
-0.0358
ASP 201
LYS 202
0.0699
LYS 202
PRO 203
0.0586
PRO 203
VAL 204
-0.0029
VAL 204
LYS 205
0.1204
LYS 205
GLN 206
0.0109
GLN 206
ALA 207
0.2351
ALA 207
GLN 208
0.1249
GLN 208
VAL 209
0.1161
VAL 209
GLN 210
0.1134
GLN 210
ILE 211
0.1404
ILE 211
ARG 212
0.0685
ARG 212
ILE 213
0.1184
ILE 213
LEU 214
-0.0052
LEU 214
ASP 215
0.0466
ASP 215
VAL 216
0.0602
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.