CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225530577246

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 0.0592
GLN 1ILE 2 -0.0112
ILE 2PRO 3 0.0175
PRO 3LEU 4 -0.0646
LEU 4CYS 5 0.0537
CYS 5ALA 6 -0.0566
ALA 6ASN 7 0.1838
ASN 7LEU 8 -0.1328
LEU 8VAL 9 0.0753
VAL 9PRO 10 0.1144
PRO 10VAL 11 0.0664
VAL 11PRO 12 0.1047
PRO 12ILE 13 0.0279
ILE 13THR 14 -0.0277
THR 14ASN 15 0.0884
ASN 15ALA 16 -0.0230
ALA 16THR 17 0.0803
THR 17LEU 18 0.0058
LEU 18ASP 19 -0.0383
ASP 19ARG 20 0.0611
ARG 20ILE 21 0.0528
ILE 21THR 22 0.0589
THR 22GLY 23 -0.0198
GLY 23LYS 24 -0.0812
LYS 24TRP 25 0.0302
TRP 25PHE 26 -0.0531
PHE 26TYR 27 -0.0608
TYR 27ILE 28 -0.0256
ILE 28ALA 29 -0.0152
ALA 29SER 30 0.0219
SER 30ALA 31 -0.0767
ALA 31PHE 32 0.0186
PHE 32ARG 33 -0.0364
ARG 33ASN 34 0.0240
ASN 34GLU 35 -0.0525
GLU 35GLU 36 0.0098
GLU 36TYR 37 -0.0180
TYR 37ASN 38 0.1149
ASN 38LYS 39 0.0232
LYS 39SER 40 -0.0818
SER 40VAL 41 -0.0321
VAL 41GLN 42 0.1314
GLN 42GLU 43 -0.1586
GLU 43ILE 44 0.0155
ILE 44GLN 45 0.0757
GLN 45ALA 46 0.0065
ALA 46THR 47 0.0974
THR 47PHE 48 -0.0167
PHE 48PHE 49 0.0069
PHE 49TYR 50 0.0204
TYR 50PHE 51 0.1157
PHE 51THR 52 -0.0092
THR 52PRO 53 0.1980
PRO 53ASN 54 -0.0421
ASN 54LYS 55 0.0938
LYS 55THR 56 -0.0173
THR 56GLU 57 -0.0558
GLU 57ASP 58 0.0195
ASP 58THR 59 0.2231
THR 59ILE 60 0.0168
ILE 60PHE 61 0.2171
PHE 61LEU 62 0.0142
LEU 62ARG 63 0.3155
ARG 63GLU 64 0.0998
GLU 64TYR 65 0.1983
TYR 65GLN 66 -0.0671
GLN 66THR 67 0.1012
THR 67ARG 68 -0.0327
ARG 68GLN 69 0.0345
GLN 69ASN 70 -0.0294
ASN 70GLN 71 0.0536
GLN 71CYS 72 -0.0153
CYS 72PHE 73 0.0400
PHE 73TYR 74 0.0177
TYR 74ASN 75 0.1647
ASN 75SER 76 0.0483
SER 76SER 77 0.4603
SER 77TYR 78 0.3353
TYR 78LEU 79 -0.0210
LEU 79ASN 80 0.1891
ASN 80VAL 81 -0.0324
VAL 81GLN 82 0.1244
GLN 82ARG 83 -0.1938
ARG 83GLU 84 0.0466
GLU 84ASN 85 0.0221
ASN 85GLY 86 -0.0595
GLY 86THR 87 -0.0349
THR 87VAL 88 0.1307
VAL 88SER 89 -0.1330
SER 89ARG 90 0.0189
ARG 90TYR 91 0.0298
TYR 91GLU 92 -0.0737
GLU 92GLY 93 0.1325
GLY 93GLY 94 -0.0709
GLY 94ARG 95 -0.0600
ARG 95GLU 96 -0.1895
GLU 96HIS 97 0.0609
HIS 97VAL 98 -0.2628
VAL 98ALA 99 -0.0651
ALA 99HIS 100 -0.0413
HIS 100LEU 101 0.0418
LEU 101LEU 102 0.0119
LEU 102PHE 103 -0.1676
PHE 103LEU 104 -0.0526
LEU 104ARG 105 -0.0595
ARG 105ASP 106 -0.0070
ASP 106THR 107 -0.0395
THR 107LYS 108 -0.0541
LYS 108THR 109 -0.0324
THR 109LEU 110 -0.0210
LEU 110MET 111 0.0063
MET 111PHE 112 -0.0208
PHE 112GLY 113 0.0653
GLY 113SER 114 -0.0173
SER 114TYR 115 0.0401
TYR 115LEU 116 -0.0819
LEU 116ASP 117 -0.0148
ASP 117ASP 118 0.0484
ASP 118GLU 119 -0.0073
GLU 119LYS 120 -0.0080
LYS 120ASN 121 -0.0152
ASN 121TRP 122 0.0098
TRP 122GLY 123 -0.0090
GLY 123LEU 124 -0.0099
LEU 124SER 125 -0.0181
SER 125PHE 126 0.0328
PHE 126TYR 127 -0.0159
TYR 127ALA 128 0.0404
ALA 128ASP 129 0.0220
ASP 129LYS 130 -0.0289
LYS 130PRO 131 0.0256
PRO 131GLU 132 -0.0204
GLU 132THR 133 -0.2348
THR 133THR 134 -0.0061
THR 134LYS 135 -0.0205
LYS 135GLU 136 0.0053
GLU 136GLN 137 0.0131
GLN 137LEU 138 0.0565
LEU 138GLY 139 -0.0944
GLY 139GLU 140 0.0721
GLU 140PHE 141 0.0218
PHE 141TYR 142 0.0335
TYR 142GLU 143 -0.1143
GLU 143ALA 144 0.0182
ALA 144LEU 145 0.0334
LEU 145ASP 146 -0.0450
ASP 146CYS 147 -0.0130
CYS 147LEU 148 -0.0696
LEU 148ARG 149 0.0388
ARG 149ILE 150 -0.1172
ILE 150PRO 151 0.0264
PRO 151ARG 152 -0.0166
ARG 152SER 153 0.0969
SER 153ASP 154 0.1125
ASP 154VAL 155 -0.0389
VAL 155MET 156 -0.1663
MET 156TYR 157 -0.0109
TYR 157THR 158 -0.2840
THR 158ASP 159 -0.0877
ASP 159TRP 160 -0.1118
TRP 160LYS 161 -0.0089
LYS 161LYS 162 0.0763
LYS 162ASP 163 -0.0667
ASP 163LYS 164 -0.0649
LYS 164CYS 165 0.0069
CYS 165GLU 166 0.0162
GLU 166PRO 167 -0.0363
PRO 167LEU 168 0.2413
LEU 168GLU 169 -0.0065
GLU 169LYS 170 0.0730
LYS 170GLN 171 0.0414
GLN 171HIS 172 0.1143
HIS 172GLU 173 0.0499
GLU 173LYS 174 0.0121
LYS 174GLU 175 0.0380
GLU 175ARG 176 0.2440
ARG 176LYS 177 0.2937
LYS 177GLN 178 -0.0382

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.