CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225530577246

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 -0.0179
GLN 1ILE 2 0.0010
ILE 2PRO 3 0.0082
PRO 3LEU 4 -0.0241
LEU 4CYS 5 -0.0330
CYS 5ALA 6 0.0346
ALA 6ASN 7 0.0223
ASN 7LEU 8 -0.0038
LEU 8VAL 9 0.1283
VAL 9PRO 10 -0.1796
PRO 10VAL 11 0.0880
VAL 11PRO 12 0.0443
PRO 12ILE 13 -0.0304
ILE 13THR 14 0.0540
THR 14ASN 15 0.0598
ASN 15ALA 16 0.0092
ALA 16THR 17 0.0831
THR 17LEU 18 0.0219
LEU 18ASP 19 0.0253
ASP 19ARG 20 0.1550
ARG 20ILE 21 0.0723
ILE 21THR 22 0.0288
THR 22GLY 23 -0.3497
GLY 23LYS 24 -0.3179
LYS 24TRP 25 -0.1243
TRP 25PHE 26 -0.1048
PHE 26TYR 27 -0.0982
TYR 27ILE 28 -0.0210
ILE 28ALA 29 0.0242
ALA 29SER 30 0.0008
SER 30ALA 31 -0.0127
ALA 31PHE 32 -0.0113
PHE 32ARG 33 0.0054
ARG 33ASN 34 -0.0083
ASN 34GLU 35 -0.0093
GLU 35GLU 36 -0.0043
GLU 36TYR 37 -0.0357
TYR 37ASN 38 0.0799
ASN 38LYS 39 0.0250
LYS 39SER 40 -0.0863
SER 40VAL 41 -0.0804
VAL 41GLN 42 0.0492
GLN 42GLU 43 0.0040
GLU 43ILE 44 -0.1321
ILE 44GLN 45 0.0972
GLN 45ALA 46 -0.0316
ALA 46THR 47 -0.0175
THR 47PHE 48 -0.1301
PHE 48PHE 49 0.0123
PHE 49TYR 50 -0.0936
TYR 50PHE 51 -0.2888
PHE 51THR 52 -0.0343
THR 52PRO 53 -0.3055
PRO 53ASN 54 -0.0030
ASN 54LYS 55 0.0029
LYS 55THR 56 0.0044
THR 56GLU 57 0.0081
GLU 57ASP 58 0.0326
ASP 58THR 59 0.0082
THR 59ILE 60 0.0287
ILE 60PHE 61 -0.1796
PHE 61LEU 62 0.0613
LEU 62ARG 63 -0.0277
ARG 63GLU 64 -0.1435
GLU 64TYR 65 0.1395
TYR 65GLN 66 -0.1219
GLN 66THR 67 0.0166
THR 67ARG 68 -0.0260
ARG 68GLN 69 0.0038
GLN 69ASN 70 0.0307
ASN 70GLN 71 0.0307
GLN 71CYS 72 0.1116
CYS 72PHE 73 0.0033
PHE 73TYR 74 -0.0073
TYR 74ASN 75 0.1920
ASN 75SER 76 0.0272
SER 76SER 77 0.1410
SER 77TYR 78 0.2632
TYR 78LEU 79 -0.1026
LEU 79ASN 80 0.0878
ASN 80VAL 81 -0.0027
VAL 81GLN 82 -0.0415
GLN 82ARG 83 -0.0430
ARG 83GLU 84 0.0051
GLU 84ASN 85 0.0441
ASN 85GLY 86 -0.0273
GLY 86THR 87 -0.0369
THR 87VAL 88 -0.0098
VAL 88SER 89 -0.0171
SER 89ARG 90 0.0767
ARG 90TYR 91 0.0771
TYR 91GLU 92 -0.1000
GLU 92GLY 93 0.1223
GLY 93GLY 94 -0.0564
GLY 94ARG 95 -0.0448
ARG 95GLU 96 -0.1431
GLU 96HIS 97 0.0456
HIS 97VAL 98 -0.1250
VAL 98ALA 99 0.0544
ALA 99HIS 100 -0.0767
HIS 100LEU 101 -0.0150
LEU 101LEU 102 -0.0544
LEU 102PHE 103 -0.0853
PHE 103LEU 104 -0.0083
LEU 104ARG 105 -0.0113
ARG 105ASP 106 -0.0298
ASP 106THR 107 0.0494
THR 107LYS 108 -0.0990
LYS 108THR 109 -0.0168
THR 109LEU 110 0.0184
LEU 110MET 111 -0.0609
MET 111PHE 112 -0.0373
PHE 112GLY 113 -0.1592
GLY 113SER 114 0.0607
SER 114TYR 115 -0.0205
TYR 115LEU 116 0.0544
LEU 116ASP 117 -0.0044
ASP 117ASP 118 0.0170
ASP 118GLU 119 -0.0152
GLU 119LYS 120 0.0183
LYS 120ASN 121 -0.0402
ASN 121TRP 122 0.0112
TRP 122GLY 123 -0.0052
GLY 123LEU 124 -0.0268
LEU 124SER 125 -0.0205
SER 125PHE 126 -0.0264
PHE 126TYR 127 -0.0979
TYR 127ALA 128 0.0383
ALA 128ASP 129 0.0478
ASP 129LYS 130 -0.0145
LYS 130PRO 131 -0.1555
PRO 131GLU 132 0.0341
GLU 132THR 133 -0.0324
THR 133THR 134 0.0070
THR 134LYS 135 0.0154
LYS 135GLU 136 -0.0046
GLU 136GLN 137 0.0176
GLN 137LEU 138 0.0276
LEU 138GLY 139 0.0131
GLY 139GLU 140 -0.0115
GLU 140PHE 141 0.0102
PHE 141TYR 142 0.0020
TYR 142GLU 143 -0.0326
GLU 143ALA 144 -0.0235
ALA 144LEU 145 0.0158
LEU 145ASP 146 -0.0118
ASP 146CYS 147 0.0055
CYS 147LEU 148 -0.0041
LEU 148ARG 149 -0.0293
ARG 149ILE 150 0.0185
ILE 150PRO 151 -0.0255
PRO 151ARG 152 0.0190
ARG 152SER 153 0.0035
SER 153ASP 154 -0.0132
ASP 154VAL 155 0.0200
VAL 155MET 156 -0.0201
MET 156TYR 157 0.1617
TYR 157THR 158 0.0797
THR 158ASP 159 0.1121
ASP 159TRP 160 0.0841
TRP 160LYS 161 -0.0238
LYS 161LYS 162 -0.1346
LYS 162ASP 163 0.1243
ASP 163LYS 164 -0.0271
LYS 164CYS 165 0.0414
CYS 165GLU 166 -0.0320
GLU 166PRO 167 -0.0088
PRO 167LEU 168 -0.1101
LEU 168GLU 169 -0.1031
GLU 169LYS 170 -0.0482
LYS 170GLN 171 -0.1189
GLN 171HIS 172 -0.0788
HIS 172GLU 173 0.0834
GLU 173LYS 174 -0.1342
LYS 174GLU 175 -0.0467
GLU 175ARG 176 -0.2184
ARG 176LYS 177 -0.1069
LYS 177GLN 178 -0.0751

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.