This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ASP 2
-0.0045
ASP 2
LYS 3
-0.0008
LYS 3
LEU 4
-0.0219
LEU 4
THR 5
-0.0100
THR 5
ILE 6
-0.0036
ILE 6
ILE 7
-0.0281
ILE 7
SER 8
-0.0265
SER 8
GLY 9
0.0264
GLY 9
CYS 10
-0.0491
CYS 10
LEU 11
-0.0273
LEU 11
PHE 12
-0.0038
PHE 12
LEU 13
0.0015
LEU 13
ALA 14
-0.0304
ALA 14
ALA 15
-0.0342
ALA 15
ASP 16
-0.0196
ASP 16
ILE 17
-0.0445
ILE 17
PHE 18
-0.0150
PHE 18
ALA 19
-0.0345
ALA 19
ILE 20
-0.0562
ILE 20
ALA 21
-0.0067
ALA 21
SER 22
-0.0149
SER 22
ILE 23
-0.0312
ILE 23
ALA 24
-0.0132
ALA 24
ASN 25
-0.0451
ASN 25
PRO 26
0.1766
PRO 26
ASP 27
-0.0458
ASP 27
TRP 28
0.0082
TRP 28
ILE 29
0.0217
ILE 29
ASN 30
0.0388
ASN 30
THR 31
-0.0257
THR 31
GLY 32
0.0115
GLY 32
GLU 33
0.0148
GLU 33
SER 34
0.0309
SER 34
ALA 35
0.0513
ALA 35
GLY 36
-0.1033
GLY 36
ALA 37
0.0343
ALA 37
LEU 38
-0.0482
LEU 38
THR 39
0.0310
THR 39
VAL 40
0.0932
VAL 40
GLY 41
0.0104
GLY 41
LEU 42
0.0147
LEU 42
VAL 43
-0.0307
VAL 43
ARG 44
0.0755
ARG 44
GLN 45
-0.0312
GLN 45
CYS 46
0.0348
CYS 46
GLN 47
0.0953
GLN 47
THR 48
-0.0068
THR 48
ILE 49
0.0554
ILE 49
HIS 50
-0.0215
HIS 50
GLY 51
-0.0012
GLY 51
ARG 52
0.0100
ARG 52
ASP 53
0.0117
ASP 53
ARG 54
0.0885
ARG 54
THR 55
-0.1463
THR 55
CYS 56
0.0797
CYS 56
ILE 57
0.0099
ILE 57
PRO 58
-0.0582
PRO 58
PRO 59
0.0103
PRO 59
ARG 60
0.0068
ARG 60
LEU 61
-0.0386
LEU 61
PRO 62
0.0218
PRO 62
PRO 63
-0.0224
PRO 63
GLU 64
-0.0028
GLU 64
TRP 65
0.0135
TRP 65
VAL 66
0.0123
VAL 66
THR 67
-0.0507
THR 67
THR 68
0.0259
THR 68
LEU 69
0.0069
LEU 69
PHE 70
-0.0224
PHE 70
PHE 71
-0.0057
PHE 71
ILE 72
0.0219
ILE 72
ILE 73
-0.0240
ILE 73
MET 74
-0.0011
MET 74
GLY 75
-0.0011
GLY 75
ILE 76
-0.0089
ILE 76
ILE 77
-0.0046
ILE 77
SER 78
0.0114
SER 78
LEU 79
-0.0178
LEU 79
THR 80
-0.0443
THR 80
VAL 81
0.0271
VAL 81
THR 82
-0.0167
THR 82
CYS 83
-0.0134
CYS 83
GLY 84
0.0133
GLY 84
LEU 85
0.0134
LEU 85
LEU 86
-0.0239
LEU 86
VAL 87
-0.0244
VAL 87
ALA 88
0.0011
ALA 88
SER 89
-0.0095
SER 89
HIS 90
-0.0106
HIS 90
TRP 91
-0.0123
TRP 91
ARG 92
-0.0212
ARG 92
ARG 93
-0.0042
ARG 93
GLU 94
0.0053
GLU 94
ALA 95
0.0268
ALA 95
THR 96
0.0056
THR 96
LYS 97
0.0061
LYS 97
TYR 98
0.0205
TYR 98
ALA 99
0.0206
ALA 99
ARG 100
-0.0014
ARG 100
TRP 101
0.0145
TRP 101
ILE 102
0.0291
ILE 102
ALA 103
0.0184
ALA 103
PHE 104
0.0084
PHE 104
THR 105
-0.0109
THR 105
GLY 106
0.0127
GLY 106
MET 107
0.0301
MET 107
VAL 108
0.0340
VAL 108
LEU 109
0.0159
LEU 109
PHE 110
0.0254
PHE 110
CYS 111
0.0218
CYS 111
MET 112
0.0064
MET 112
ALA 113
0.0145
ALA 113
ALA 114
0.0326
ALA 114
LEU 115
0.0203
LEU 115
ILE 116
0.0292
ILE 116
PHE 117
0.0302
PHE 117
PRO 118
0.0022
PRO 118
ILE 119
0.0206
ILE 119
GLY 120
-0.0247
GLY 120
PHE 121
0.0109
PHE 121
TYR 122
0.0277
TYR 122
ILE 123
-0.0002
ILE 123
ASN 124
-0.0015
ASN 124
GLU 125
-0.0788
GLU 125
VAL 126
0.0233
VAL 126
GLY 127
-0.0074
GLY 127
GLY 128
-0.0161
GLY 128
GLN 129
-0.0224
GLN 129
PRO 130
-0.0213
PRO 130
TYR 131
0.0107
TYR 131
LYS 132
-0.0568
LYS 132
LEU 133
0.0000
LEU 133
PRO 134
-0.0135
PRO 134
ASN 135
0.0344
ASN 135
ASN 136
-0.0279
ASN 136
THR 137
0.0143
THR 137
VAL 138
-0.0112
VAL 138
VAL 139
-0.0056
VAL 139
GLY 140
0.0140
GLY 140
SER 141
0.0320
SER 141
SER 142
-0.0258
SER 142
TYR 143
0.0068
TYR 143
VAL 144
0.0053
VAL 144
LEU 145
-0.0085
LEU 145
PHE 146
-0.0038
PHE 146
VAL 147
0.0067
VAL 147
LEU 148
-0.0142
LEU 148
SER 149
-0.0090
SER 149
ILE 150
0.0026
ILE 150
PHE 151
-0.0072
PHE 151
PHE 152
-0.0153
PHE 152
THR 153
0.0178
THR 153
ILE 154
0.0114
ILE 154
VAL 155
-0.0242
VAL 155
GLY 156
0.0023
GLY 156
LEU 157
-0.0087
LEU 157
LEU 158
0.0073
LEU 158
PHE 159
-0.0320
PHE 159
ALA 160
0.0105
ALA 160
GLY 161
-0.0273
GLY 161
LYS 162
-0.0097
LYS 162
VAL 163
-0.0260
VAL 163
CYS 164
0.0519
CYS 164
LEU 165
0.0172
LEU 165
PRO 166
-0.0156
PRO 166
GLY 167
0.0284
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.