This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ASP 2
-0.0022
ASP 2
LYS 3
-0.0115
LYS 3
LEU 4
-0.0004
LEU 4
THR 5
-0.0178
THR 5
ILE 6
-0.0271
ILE 6
ILE 7
0.0222
ILE 7
SER 8
-0.0603
SER 8
GLY 9
0.0122
GLY 9
CYS 10
-0.0026
CYS 10
LEU 11
-0.0173
LEU 11
PHE 12
-0.0115
PHE 12
LEU 13
-0.0142
LEU 13
ALA 14
0.0306
ALA 14
ALA 15
-0.0198
ALA 15
ASP 16
-0.0201
ASP 16
ILE 17
-0.0132
ILE 17
PHE 18
-0.0118
PHE 18
ALA 19
-0.0155
ALA 19
ILE 20
0.0045
ILE 20
ALA 21
-0.0393
ALA 21
SER 22
0.0020
SER 22
ILE 23
0.0258
ILE 23
ALA 24
-0.0208
ALA 24
ASN 25
-0.0505
ASN 25
PRO 26
-0.0140
PRO 26
ASP 27
0.0869
ASP 27
TRP 28
-0.0075
TRP 28
ILE 29
-0.0619
ILE 29
ASN 30
-0.2336
ASN 30
THR 31
-0.1675
THR 31
GLY 32
0.1505
GLY 32
GLU 33
0.0797
GLU 33
SER 34
-0.0895
SER 34
ALA 35
0.0682
ALA 35
GLY 36
0.1370
GLY 36
ALA 37
-0.0846
ALA 37
LEU 38
0.0606
LEU 38
THR 39
-0.1782
THR 39
VAL 40
0.0653
VAL 40
GLY 41
-0.0194
GLY 41
LEU 42
-0.0426
LEU 42
VAL 43
0.0079
VAL 43
ARG 44
-0.0500
ARG 44
GLN 45
0.0562
GLN 45
CYS 46
-0.1109
CYS 46
GLN 47
0.1332
GLN 47
THR 48
0.0565
THR 48
ILE 49
-0.0197
ILE 49
HIS 50
0.1110
HIS 50
GLY 51
-0.0423
GLY 51
ARG 52
-0.0084
ARG 52
ASP 53
-0.0064
ASP 53
ARG 54
0.0210
ARG 54
THR 55
-0.0479
THR 55
CYS 56
0.1531
CYS 56
ILE 57
-0.1869
ILE 57
PRO 58
0.0518
PRO 58
PRO 59
-0.0187
PRO 59
ARG 60
-0.0067
ARG 60
LEU 61
-0.0470
LEU 61
PRO 62
-0.0623
PRO 62
PRO 63
0.0211
PRO 63
GLU 64
0.0044
GLU 64
TRP 65
0.0021
TRP 65
VAL 66
-0.0053
VAL 66
THR 67
0.0206
THR 67
THR 68
0.0144
THR 68
LEU 69
0.0122
LEU 69
PHE 70
-0.0069
PHE 70
PHE 71
0.0151
PHE 71
ILE 72
0.0203
ILE 72
ILE 73
0.0056
ILE 73
MET 74
-0.0003
MET 74
GLY 75
0.0255
GLY 75
ILE 76
0.0158
ILE 76
ILE 77
-0.0109
ILE 77
SER 78
0.0503
SER 78
LEU 79
-0.0164
LEU 79
THR 80
0.0273
THR 80
VAL 81
0.0315
VAL 81
THR 82
0.0170
THR 82
CYS 83
0.0308
CYS 83
GLY 84
0.0344
GLY 84
LEU 85
0.0637
LEU 85
LEU 86
-0.0154
LEU 86
VAL 87
0.0225
VAL 87
ALA 88
0.0315
ALA 88
SER 89
0.0111
SER 89
HIS 90
-0.0287
HIS 90
TRP 91
0.1050
TRP 91
ARG 92
0.0039
ARG 92
ARG 93
0.0493
ARG 93
GLU 94
-0.0045
GLU 94
ALA 95
0.0193
ALA 95
THR 96
0.0024
THR 96
LYS 97
0.0056
LYS 97
TYR 98
0.0134
TYR 98
ALA 99
0.0468
ALA 99
ARG 100
-0.0430
ARG 100
TRP 101
-0.0322
TRP 101
ILE 102
0.0367
ILE 102
ALA 103
0.0424
ALA 103
PHE 104
0.0204
PHE 104
THR 105
-0.0326
THR 105
GLY 106
-0.0107
GLY 106
MET 107
0.0275
MET 107
VAL 108
0.0276
VAL 108
LEU 109
0.0441
LEU 109
PHE 110
-0.0086
PHE 110
CYS 111
0.0432
CYS 111
MET 112
0.0669
MET 112
ALA 113
-0.0352
ALA 113
ALA 114
-0.0036
ALA 114
LEU 115
0.0406
LEU 115
ILE 116
0.0116
ILE 116
PHE 117
-0.0450
PHE 117
PRO 118
0.0296
PRO 118
ILE 119
0.0272
ILE 119
GLY 120
0.0028
GLY 120
PHE 121
-0.0201
PHE 121
TYR 122
0.0098
TYR 122
ILE 123
-0.0794
ILE 123
ASN 124
0.0129
ASN 124
GLU 125
0.0952
GLU 125
VAL 126
-0.0776
VAL 126
GLY 127
-0.0283
GLY 127
GLY 128
-0.0088
GLY 128
GLN 129
0.0140
GLN 129
PRO 130
0.0277
PRO 130
TYR 131
-0.0308
TYR 131
LYS 132
0.0326
LYS 132
LEU 133
0.0079
LEU 133
PRO 134
0.0536
PRO 134
ASN 135
-0.1285
ASN 135
ASN 136
0.0488
ASN 136
THR 137
0.0122
THR 137
VAL 138
0.0593
VAL 138
VAL 139
-0.1443
VAL 139
GLY 140
0.0965
GLY 140
SER 141
-0.0132
SER 141
SER 142
-0.0225
SER 142
TYR 143
0.0272
TYR 143
VAL 144
0.0669
VAL 144
LEU 145
-0.0041
LEU 145
PHE 146
-0.0276
PHE 146
VAL 147
0.0231
VAL 147
LEU 148
0.0289
LEU 148
SER 149
-0.0443
SER 149
ILE 150
-0.0029
ILE 150
PHE 151
0.0659
PHE 151
PHE 152
-0.0046
PHE 152
THR 153
-0.0235
THR 153
ILE 154
-0.0090
ILE 154
VAL 155
0.0313
VAL 155
GLY 156
-0.0122
GLY 156
LEU 157
-0.0013
LEU 157
LEU 158
-0.0003
LEU 158
PHE 159
-0.0344
PHE 159
ALA 160
-0.0057
ALA 160
GLY 161
-0.0748
GLY 161
LYS 162
-0.0404
LYS 162
VAL 163
-0.0390
VAL 163
CYS 164
0.1244
CYS 164
LEU 165
0.0030
LEU 165
PRO 166
-0.0371
PRO 166
GLY 167
0.0841
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.