CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  estradiol a701e  ***

CA strain for 2103290409067522

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
VAL 1HIS 2 0.0560
HIS 2HIS 3 -0.0808
HIS 3GLN 4 -0.0390
GLN 4LYS 5 -0.0032
LYS 5LEU 6 -0.0352
LEU 6VAL 7 0.0257
VAL 7PHE 8 -0.0248
PHE 8PHE 9 -0.0223
PHE 9ALA 10 -0.0013
ALA 10GLU 11 0.0089
GLU 11ASP 12 -0.0327
ASP 12VAL 13 0.0083
VAL 13GLY 14 -0.0071
GLY 14SER 15 -0.0019
SER 15ASN 16 0.0016
ASN 16LYS 17 0.0066
LYS 17GLY 18 0.0018
GLY 18GLU 19 -0.0055
GLU 19ILE 20 0.0003
ILE 20ILE 21 0.0039
ILE 21GLY 22 -0.0144
GLY 22LEU 23 -0.0003
LEU 23MET 24 0.0084
MET 24VAL 25 -0.0095
VAL 25GLY 26 -0.0179
GLY 26GLY 27 0.0015
GLY 27VAL 28 -0.0180
VAL 28VAL 29 -0.0131
VAL 29ILE 30 -0.0071
ILE 30ALA 31 -0.0356
ALA 31THR 32 -0.0446
THR 32VAL 33 -0.0185
VAL 33ILE 34 0.0037
ILE 34VAL 35 -0.0152
VAL 35ILE 36 -0.0141
ILE 36THR 37 -0.0200
THR 37LEU 38 0.0070
LEU 38VAL 39 -0.0418
VAL 39MET 40 -0.0004
MET 40LEU 41 -0.0263
LEU 41LYS 42 0.0747
LYS 42LYS 43 0.0421
LYS 43LYS 44 -0.0082
LYS 44GLN 45 -0.0280
GLN 45TYR 46 -0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.