CNRS Nantes University US2B US2B
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***  bacteriorhodopsin  ***

CA distance fluctuations for 2404222055381936730

---  normal mode 8  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
GLY 120 0.02 ILE 4 -0.25 GLU 234
GLN 75 0.01 THR 5 -0.22 GLU 234
MET 68 0.02 GLY 6 -0.20 GLU 234
GLN 75 0.03 ARG 7 -0.18 GLU 234
GLU 74 0.04 PRO 8 -0.14 GLU 234
GLU 74 0.03 GLU 9 -0.15 GLU 234
GLU 74 0.02 TRP 10 -0.20 GLU 234
ARG 225 0.03 ILE 11 -0.18 GLU 234
LEU 221 0.03 TRP 12 -0.16 GLU 234
LEU 221 0.02 LEU 13 -0.21 GLU 234
LEU 109 0.01 ALA 14 -0.24 GLU 234
TYR 26 0.03 LEU 15 -0.21 GLU 234
TYR 26 0.02 GLY 16 -0.22 GLU 234
LEU 109 0.02 THR 17 -0.29 GLU 234
LEU 109 0.02 ALA 18 -0.29 GLU 234
TYR 26 0.04 LEU 19 -0.25 GLU 234
LEU 109 0.02 MET 20 -0.30 GLU 234
LEU 109 0.03 GLY 21 -0.37 GLU 234
LEU 19 0.02 LEU 22 -0.35 GLU 234
LEU 19 0.04 GLY 23 -0.33 GLU 234
GLN 105 0.03 THR 24 -0.42 GLU 234
GLN 105 0.03 LEU 25 -0.47 GLU 234
VAL 210 0.04 TYR 26 -0.42 GLU 234
VAL 210 0.04 PHE 27 -0.45 GLU 234
ALA 44 0.04 LEU 28 -0.57 GLU 234
VAL 210 0.03 VAL 29 -0.60 GLU 234
VAL 210 0.05 LYS 30 -0.54 GLU 234
LYS 40 0.03 GLY 31 -0.64 GLU 234
LYS 41 0.03 MET 32 -0.79 GLU 234
VAL 210 0.04 GLY 33 -0.86 GLU 234
ARG 225 0.05 VAL 34 -0.83 GLU 234
ARG 225 0.05 SER 35 -0.99 GLU 234
PHE 230 0.07 ASP 36 -0.75 GLU 234
ILE 229 0.07 PRO 37 -0.69 GLU 234
ILE 229 0.07 ASP 38 -0.45 GLU 234
ILE 229 0.05 ALA 39 -0.48 GLU 234
ARG 225 0.04 LYS 40 -0.63 GLU 234
GLY 31 0.03 LYS 41 -0.49 GLU 234
LEU 100 0.02 PHE 42 -0.37 GLU 234
SER 214 0.02 TYR 43 -0.48 GLU 234
LEU 28 0.04 ALA 44 -0.54 GLU 234
GLN 105 0.04 ILE 45 -0.40 GLU 234
GLN 105 0.03 THR 46 -0.35 GLU 234
GLN 105 0.03 THR 47 -0.44 GLU 234
GLN 105 0.04 LEU 48 -0.45 GLU 234
LEU 109 0.03 VAL 49 -0.34 GLU 234
LEU 109 0.03 PRO 50 -0.33 GLU 234
LEU 109 0.04 ALA 51 -0.42 GLU 234
LEU 109 0.04 ILE 52 -0.39 GLU 234
LEU 109 0.03 ALA 53 -0.31 GLU 234
LEU 109 0.03 PHE 54 -0.35 GLU 234
GLY 113 0.03 THR 55 -0.39 GLU 234
LEU 87 0.03 MET 56 -0.33 GLU 234
GLY 113 0.02 TYR 57 -0.29 GLU 234
GLY 113 0.03 LEU 58 -0.34 GLU 234
GLY 116 0.03 SER 59 -0.33 GLU 234
GLY 120 0.02 MET 60 -0.27 GLU 234
GLY 116 0.02 LEU 61 -0.28 GLU 234
GLY 120 0.02 LEU 62 -0.31 GLU 234
GLY 120 0.02 GLY 63 -0.28 GLU 234
GLY 120 0.03 TYR 64 -0.32 GLU 234
GLY 120 0.03 GLY 65 -0.29 GLU 234
GLY 120 0.02 LEU 66 -0.25 GLU 234
SER 183 0.02 THR 67 -0.23 GLU 234
VAL 180 0.03 MET 68 -0.20 GLU 234
VAL 180 0.04 VAL 69 -0.18 GLU 234
VAL 180 0.04 PRO 70 -0.15 GLU 234
VAL 180 0.05 PHE 71 -0.11 GLU 234
GLY 197 0.07 GLY 72 -0.08 GLU 234
GLY 197 0.07 GLY 73 -0.10 GLU 234
PRO 200 0.07 GLU 74 -0.12 GLU 234
PRO 200 0.06 GLN 75 -0.15 GLU 234
VAL 180 0.04 ASN 76 -0.14 GLU 234
VAL 180 0.04 PRO 77 -0.17 GLU 234
VAL 180 0.04 ILE 78 -0.18 GLU 234
VAL 180 0.03 TYR 79 -0.21 GLU 234
SER 183 0.03 TRP 80 -0.23 GLU 234
GLY 120 0.03 ALA 81 -0.27 GLU 234
SER 59 0.02 ARG 82 -0.22 GLU 234
ILE 119 0.03 TYR 83 -0.22 GLU 234
GLY 116 0.03 ALA 84 -0.29 GLU 234
MET 56 0.03 ASP 85 -0.29 GLU 234
THR 55 0.03 TRP 86 -0.22 GLU 234
THR 55 0.03 LEU 87 -0.25 GLU 234
GLY 113 0.04 PHE 88 -0.31 GLU 234
LEU 109 0.03 THR 89 -0.27 GLU 234
THR 55 0.02 THR 90 -0.18 GLU 234
THR 89 0.03 PRO 91 -0.21 GLU 234
LEU 109 0.04 LEU 92 -0.27 GLU 234
GLN 105 0.02 LEU 93 -0.17 GLU 234
LEU 93 0.02 LEU 94 -0.12 ALA 233
GLN 105 0.03 LEU 95 -0.19 GLU 234
THR 46 0.02 ASP 96 -0.17 GLU 234
ARG 164 0.03 LEU 97 -0.10 GLY 231
THR 46 0.02 ALA 98 -0.15 ALA 233
ALA 44 0.02 LEU 99 -0.22 ALA 233
PRO 37 0.03 LEU 100 -0.14 GLY 231
GLU 234 0.11 VAL 101 -0.11 GLY 231
LYS 41 0.02 ASP 102 -0.22 ALA 233
ILE 45 0.02 ALA 103 -0.19 ALA 233
ILE 45 0.03 ASP 104 -0.23 ALA 233
LEU 48 0.04 GLN 105 -0.26 ALA 233
LEU 48 0.03 GLY 106 -0.21 ALA 233
LEU 48 0.03 THR 107 -0.17 ALA 233
LEU 92 0.03 ILE 108 -0.20 ALA 233
LEU 92 0.04 LEU 109 -0.21 ALA 233
PHE 88 0.03 ALA 110 -0.16 ALA 233
PHE 88 0.03 LEU 111 -0.14 ALA 233
PHE 88 0.04 VAL 112 -0.18 ALA 233
PHE 88 0.04 GLY 113 -0.17 ALA 233
ALA 84 0.03 ALA 114 -0.13 ALA 233
ALA 84 0.03 ASP 115 -0.13 ALA 233
ALA 84 0.03 GLY 116 -0.18 GLU 234
ALA 84 0.03 ILE 117 -0.13 ALA 233
TYR 150 0.03 MET 118 -0.10 ALA 233
TYR 83 0.03 ILE 119 -0.15 GLU 234
GLY 65 0.03 GLY 120 -0.18 GLU 234
TYR 150 0.03 THR 121 -0.13 GLU 234
SER 183 0.05 GLY 122 -0.12 GLU 234
SER 183 0.04 LEU 123 -0.18 GLU 234
SER 183 0.04 VAL 124 -0.16 GLU 234
SER 183 0.05 GLY 125 -0.12 GLU 234
SER 183 0.05 ALA 126 -0.14 GLU 234
SER 183 0.04 LEU 127 -0.17 GLU 234
SER 183 0.04 THR 128 -0.14 GLU 234
VAL 180 0.04 LYS 129 -0.14 GLU 234
VAL 180 0.04 VAL 130 -0.10 GLU 234
VAL 180 0.05 TYR 131 -0.07 GLU 234
VAL 180 0.06 SER 132 -0.04 PRO 37
VAL 180 0.05 TYR 133 -0.07 GLU 234
SER 183 0.05 ARG 134 -0.07 GLU 234
ASN 176 0.06 PHE 135 -0.04 LYS 41
ASN 176 0.06 VAL 136 -0.05 ALA 233
SER 183 0.05 TRP 137 -0.07 ALA 233
SER 183 0.06 TRP 138 -0.05 ALA 233
ASN 176 0.07 ALA 139 -0.04 GLY 113
TYR 150 0.05 ILE 140 -0.07 ALA 233
VAL 179 0.04 SER 141 -0.07 ALA 233
VAL 179 0.06 THR 142 -0.04 GLY 231
TYR 150 0.06 ALA 143 -0.04 GLY 231
TYR 150 0.04 ALA 144 -0.07 ALA 233
ARG 164 0.04 MET 145 -0.05 GLY 231
GLU 234 0.08 LEU 146 -0.04 GLY 231
GLU 234 0.06 TYR 147 -0.05 GLY 231
ARG 164 0.04 ILE 148 -0.06 GLY 231
GLU 234 0.11 LEU 149 -0.04 GLY 231
GLU 234 0.15 TYR 150 -0.04 GLY 231
GLU 234 0.12 VAL 151 -0.06 GLY 231
GLU 234 0.13 LEU 152 -0.05 GLY 231
GLU 234 0.23 PHE 153 -0.03 GLY 231
GLU 234 0.25 PHE 154 -0.04 GLY 231
GLU 234 0.20 GLY 155 -0.06 GLY 231
GLU 234 0.19 PHE 156 -0.06 GLY 231
GLU 234 0.30 THR 157 -0.03 GLY 231
GLU 234 0.36 SER 158 -0.03 GLY 231
GLU 234 0.30 LYS 159 -0.06 GLY 231
GLU 234 0.33 ALA 160 -0.05 GLY 231
GLU 234 0.48 GLU 161 -0.03 ARG 225
GLU 234 0.49 SER 162 -0.03 ARG 225
GLU 234 0.42 MET 163 -0.03 GLY 231
GLU 234 0.48 ARG 164 -0.03 ARG 225
GLU 234 0.58 PRO 165 -0.06 ARG 225
GLU 234 0.40 GLU 166 -0.06 ARG 225
GLU 234 0.26 VAL 167 -0.04 ARG 225
GLU 234 0.38 ALA 168 -0.04 ARG 225
GLU 234 0.39 SER 169 -0.05 ARG 225
GLU 234 0.22 THR 170 -0.04 ARG 225
GLU 234 0.19 PHE 171 -0.03 GLY 231
GLU 234 0.28 LYS 172 -0.03 SER 158
GLU 234 0.23 VAL 173 -0.03 GLY 23
GLU 234 0.11 LEU 174 -0.03 GLY 23
GLU 234 0.15 ARG 175 -0.03 GLY 231
GLU 234 0.19 ASN 176 -0.02 VAL 217
GLU 234 0.11 VAL 177 -0.03 VAL 217
VAL 187 0.06 THR 178 -0.02 GLY 231
GLU 234 0.11 VAL 179 -0.03 VAL 180
GLU 234 0.12 VAL 180 -0.04 TYR 150
ALA 184 0.09 LEU 181 -0.03 TYR 150
VAL 177 0.05 TRP 182 -0.03 GLY 231
PRO 186 0.08 SER 183 -0.02 LEU 211
VAL 180 0.10 ALA 184 -0.03 LEU 146
VAL 177 0.06 TYR 185 -0.02 LEU 146
SER 183 0.08 PRO 186 -0.03 MET 118
VAL 180 0.10 VAL 187 -0.03 VAL 188
VAL 180 0.08 VAL 188 -0.03 VAL 187
VAL 180 0.07 TRP 189 -0.04 GLU 234
VAL 180 0.08 LEU 190 -0.03 ILE 119
VAL 180 0.08 ILE 191 -0.02 ILE 119
VAL 180 0.07 GLY 192 -0.04 GLU 234
GLU 74 0.06 SER 193 -0.08 GLU 234
VAL 180 0.06 GLU 194 -0.09 GLU 234
VAL 180 0.07 GLY 195 -0.04 GLU 234
VAL 180 0.07 ALA 196 -0.03 GLY 113
GLY 72 0.07 GLY 197 -0.03 GLU 234
ASN 176 0.07 ILE 198 -0.02 PRO 200
VAL 173 0.06 VAL 199 -0.03 PRO 200
GLU 74 0.07 PRO 200 -0.05 GLU 234
GLU 74 0.05 LEU 201 -0.09 GLU 234
GLU 74 0.05 ASN 202 -0.10 GLU 234
ILE 222 0.05 ILE 203 -0.05 GLU 234
ILE 222 0.05 GLU 204 -0.06 GLU 234
GLY 218 0.04 THR 205 -0.11 GLU 234
LEU 221 0.05 LEU 206 -0.08 GLU 234
GLY 218 0.07 LEU 207 -0.04 GLU 234
GLY 218 0.05 PHE 208 -0.09 GLU 234
LEU 221 0.05 MET 209 -0.12 GLU 234
GLY 218 0.08 VAL 210 -0.06 GLU 234
GLY 218 0.07 LEU 211 -0.05 GLU 234
GLY 218 0.04 ASP 212 -0.13 GLU 234
LEU 221 0.05 VAL 213 -0.14 GLU 234
GLY 218 0.10 SER 214 -0.06 GLU 234
PHE 219 0.05 ALA 215 -0.08 GLU 234
LEU 211 0.04 LYS 216 -0.17 GLU 234
VAL 210 0.05 VAL 217 -0.19 GLU 234
SER 214 0.10 GLY 218 -0.08 GLU 234
SER 214 0.06 PHE 219 -0.07 GLU 234
SER 214 0.06 GLY 220 -0.18 GLU 234
ALA 233 0.08 LEU 221 -0.14 GLU 234
ALA 233 0.13 ILE 222 -0.05 LEU 221
ALA 233 0.07 LEU 223 -0.08 GLU 234
SER 214 0.05 LEU 224 -0.22 GLU 234
ALA 233 0.16 ARG 225 -0.11 GLU 234
ALA 233 0.21 SER 226 -0.07 ARG 225
ALA 233 0.28 ARG 227 -0.05 LYS 30
ALA 233 0.14 ALA 228 -0.04 LEU 99
PRO 37 0.07 ILE 229 -0.16 GLU 234
ASP 36 0.07 PHE 230 -0.21 GLU 234
ARG 227 0.05 GLY 231 -0.23 ALA 233
GLU 166 0.20 GLU 232 -0.15 ASP 38
GLU 166 0.32 ALA 233 -0.53 PRO 37
PRO 165 0.58 GLU 234 -0.99 SER 35

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.