CNRS Nantes University US2B US2B
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***  bacteriorhodopsin  ***

CA distance fluctuations for 2404222055381936730

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ILE 198 0.04 ILE 4 -0.08 GLU 234
VAL 177 0.05 THR 5 -0.07 GLU 234
ILE 198 0.06 GLY 6 -0.06 GLU 234
ILE 198 0.06 ARG 7 -0.08 GLN 75
LEU 146 0.05 PRO 8 -0.12 GLU 74
SER 183 0.05 GLU 9 -0.10 GLU 74
VAL 210 0.05 TRP 10 -0.07 GLU 74
VAL 210 0.07 ILE 11 -0.09 TYR 26
VAL 210 0.08 TRP 12 -0.11 TYR 26
VAL 210 0.06 LEU 13 -0.07 GLU 234
VAL 177 0.07 ALA 14 -0.08 GLU 234
VAL 177 0.10 LEU 15 -0.12 TYR 26
SER 214 0.09 GLY 16 -0.09 TYR 26
SER 214 0.08 THR 17 -0.10 GLU 234
GLY 218 0.09 ALA 18 -0.11 LEU 15
GLY 218 0.12 LEU 19 -0.14 TYR 26
GLY 218 0.11 MET 20 -0.10 GLU 234
LEU 22 0.11 GLY 21 -0.15 GLU 234
GLY 218 0.11 LEU 22 -0.13 GLU 234
LEU 221 0.11 GLY 23 -0.14 LEU 19
ALA 81 0.10 THR 24 -0.18 GLU 234
TYR 26 0.14 LEU 25 -0.22 GLU 234
LEU 25 0.14 TYR 26 -0.16 GLU 234
ILE 52 0.10 PHE 27 -0.20 GLU 234
ILE 52 0.15 LEU 28 -0.32 GLU 234
ILE 52 0.11 VAL 29 -0.30 GLU 234
ILE 52 0.09 LYS 30 -0.25 GLU 234
PHE 88 0.12 GLY 31 -0.37 GLU 234
PHE 88 0.15 MET 32 -0.50 GLU 234
PHE 88 0.13 GLY 33 -0.54 GLU 234
GLY 120 0.12 VAL 34 -0.59 GLU 234
GLY 120 0.13 SER 35 -0.85 GLU 234
GLY 120 0.12 ASP 36 -0.74 GLU 234
GLY 116 0.15 PRO 37 -0.70 GLU 234
GLY 116 0.13 ASP 38 -0.42 GLU 234
GLY 116 0.12 ALA 39 -0.35 GLU 234
GLY 120 0.14 LYS 40 -0.48 GLU 234
GLY 116 0.17 LYS 41 -0.36 GLU 234
GLY 116 0.13 PHE 42 -0.21 GLU 234
PHE 88 0.13 TYR 43 -0.27 GLU 234
GLY 120 0.15 ALA 44 -0.31 GLU 234
GLY 120 0.16 ILE 45 -0.21 GLU 234
GLY 120 0.11 THR 46 -0.15 GLU 234
LEU 48 0.12 THR 47 -0.21 GLU 234
MET 32 0.15 LEU 48 -0.21 GLU 234
ASP 85 0.11 VAL 49 -0.13 GLU 234
ALA 81 0.09 PRO 50 -0.12 GLU 234
LEU 28 0.14 ALA 51 -0.18 GLU 234
LEU 28 0.15 ILE 52 -0.15 GLU 234
ALA 81 0.11 ALA 53 -0.10 GLU 234
ALA 81 0.09 PHE 54 -0.13 GLU 234
LEU 28 0.14 THR 55 -0.14 GLU 234
LEU 28 0.12 MET 56 -0.10 GLU 234
LEU 28 0.07 TYR 57 -0.09 GLU 234
LEU 28 0.09 LEU 58 -0.11 GLU 234
LEU 28 0.11 SER 59 -0.11 GLU 234
LEU 28 0.07 MET 60 -0.08 GLU 234
LEU 28 0.05 LEU 61 -0.09 GLU 234
LEU 28 0.07 LEU 62 -0.10 GLU 234
MET 32 0.08 GLY 63 -0.09 GLU 234
MET 32 0.12 TYR 64 -0.09 GLY 113
MET 32 0.12 GLY 65 -0.09 GLY 116
THR 55 0.11 LEU 66 -0.07 GLY 120
MET 68 0.13 THR 67 -0.06 GLY 120
THR 67 0.13 MET 68 -0.06 PRO 8
MET 32 0.10 VAL 69 -0.07 PRO 200
ALA 84 0.09 PRO 70 -0.10 PRO 200
ALA 84 0.08 PHE 71 -0.11 PRO 200
VAL 130 0.06 GLY 72 -0.19 GLY 197
VAL 130 0.06 GLY 73 -0.18 PRO 200
TYR 64 0.05 GLU 74 -0.19 PRO 200
THR 67 0.08 GLN 75 -0.14 PRO 200
TYR 64 0.05 ASN 76 -0.11 PRO 200
MET 32 0.06 PRO 77 -0.06 ASN 202
MET 32 0.07 ILE 78 -0.04 VAL 124
MET 32 0.08 TYR 79 -0.06 GLY 120
MET 32 0.12 TRP 80 -0.08 GLY 120
ILE 52 0.14 ALA 81 -0.09 GLY 116
ILE 52 0.10 ARG 82 -0.05 GLY 116
LEU 48 0.12 TYR 83 -0.10 ILE 119
MET 32 0.15 ALA 84 -0.11 GLY 113
MET 32 0.13 ASP 85 -0.09 GLY 113
MET 32 0.10 TRP 86 -0.07 MET 56
ILE 45 0.15 LEU 87 -0.11 GLY 113
MET 32 0.15 PHE 88 -0.13 VAL 112
MET 32 0.11 THR 89 -0.09 LEU 109
GLY 120 0.10 THR 90 -0.06 THR 55
GLY 116 0.15 PRO 91 -0.09 PHE 88
GLY 120 0.15 LEU 92 -0.10 GLN 105
GLY 120 0.09 LEU 93 -0.06 GLN 105
GLY 116 0.09 LEU 94 -0.05 THR 55
GLY 116 0.13 LEU 95 -0.07 LEU 92
GLY 116 0.10 ASP 96 -0.04 LEU 48
GLU 234 0.07 LEU 97 -0.03 VAL 187
GLU 232 0.08 ALA 98 -0.05 LEU 48
GLY 116 0.10 LEU 99 -0.05 ASP 102
GLU 234 0.10 LEU 100 -0.04 ALA 44
GLU 234 0.18 VAL 101 -0.04 ALA 44
GLU 232 0.14 ASP 102 -0.05 LEU 48
GLU 232 0.11 ALA 103 -0.06 LEU 48
GLU 232 0.12 ASP 104 -0.08 ILE 52
GLU 232 0.12 GLN 105 -0.11 ILE 52
ILE 140 0.10 GLY 106 -0.10 PHE 88
GLU 232 0.09 THR 107 -0.09 PHE 88
GLU 232 0.10 ILE 108 -0.10 PHE 88
ILE 140 0.12 LEU 109 -0.13 PHE 88
ALA 143 0.12 ALA 110 -0.10 PHE 88
ALA 144 0.09 LEU 111 -0.10 PHE 88
LYS 41 0.13 VAL 112 -0.13 PHE 88
ILE 140 0.14 GLY 113 -0.11 ALA 84
ILE 140 0.12 ALA 114 -0.09 ALA 84
LYS 41 0.11 ASP 115 -0.10 ALA 84
LYS 41 0.17 GLY 116 -0.10 ALA 84
LYS 41 0.14 ILE 117 -0.08 GLY 65
LYS 41 0.10 MET 118 -0.07 TYR 147
LYS 41 0.12 ILE 119 -0.10 TYR 83
LYS 41 0.16 GLY 120 -0.09 GLY 65
LYS 41 0.13 THR 121 -0.07 SER 183
ILE 119 0.10 GLY 122 -0.10 SER 183
PHE 88 0.13 LEU 123 -0.07 SER 183
PHE 88 0.14 VAL 124 -0.07 SER 183
PHE 88 0.11 GLY 125 -0.10 SER 183
PHE 88 0.10 ALA 126 -0.08 SER 183
ALA 84 0.12 LEU 127 -0.07 SER 183
PHE 88 0.12 THR 128 -0.07 SER 183
ALA 84 0.10 LYS 129 -0.08 VAL 180
LYS 41 0.10 VAL 130 -0.09 VAL 180
PHE 88 0.08 TYR 131 -0.10 VAL 180
GLY 113 0.09 SER 132 -0.13 VAL 180
GLY 113 0.11 TYR 133 -0.11 VAL 180
GLY 113 0.09 ARG 134 -0.11 VAL 180
GLY 113 0.10 PHE 135 -0.14 VAL 180
GLY 113 0.11 VAL 136 -0.13 SER 183
GLY 113 0.12 TRP 137 -0.11 SER 183
GLY 113 0.10 TRP 138 -0.15 SER 183
GLY 113 0.12 ALA 139 -0.16 SER 183
GLY 113 0.14 ILE 140 -0.11 ALA 143
GLY 113 0.12 SER 141 -0.10 SER 183
ALA 114 0.10 THR 142 -0.14 VAL 179
ALA 110 0.12 ALA 143 -0.11 ASN 176
ALA 114 0.11 ALA 144 -0.08 ASN 176
PRO 186 0.08 MET 145 -0.10 ASN 176
ALA 184 0.12 LEU 146 -0.11 ASN 176
GLU 234 0.09 TYR 147 -0.10 TYR 150
GLU 234 0.09 ILE 148 -0.06 ALA 84
GLU 234 0.12 LEU 149 -0.09 LEU 146
GLU 234 0.15 TYR 150 -0.10 TYR 147
GLU 234 0.14 VAL 151 -0.05 PHE 88
GLU 234 0.16 LEU 152 -0.07 LEU 146
GLU 234 0.21 PHE 153 -0.10 LEU 146
GLU 234 0.22 PHE 154 -0.06 ILE 140
GLU 234 0.20 GLY 155 -0.05 PHE 88
GLU 234 0.21 PHE 156 -0.04 LEU 146
GLU 234 0.29 THR 157 -0.07 LEU 146
GLU 234 0.32 SER 158 -0.05 LEU 146
GLU 234 0.29 LYS 159 -0.03 ASP 38
GLU 234 0.35 ALA 160 -0.05 ASP 38
GLU 234 0.46 GLU 161 -0.05 LEU 146
GLU 234 0.45 SER 162 -0.06 ASP 38
GLU 234 0.46 MET 163 -0.07 ASP 38
GLU 234 0.60 ARG 164 -0.06 GLY 231
GLU 234 0.71 PRO 165 -0.07 VAL 187
GLU 234 0.59 GLU 166 -0.09 VAL 187
GLU 234 0.39 VAL 167 -0.06 VAL 187
GLU 234 0.45 ALA 168 -0.07 LEU 146
GLU 234 0.46 SER 169 -0.10 VAL 187
GLU 234 0.33 THR 170 -0.10 VAL 187
GLU 234 0.27 PHE 171 -0.08 VAL 187
GLU 234 0.32 LYS 172 -0.10 ALA 139
GLU 234 0.27 VAL 173 -0.12 VAL 187
GLU 234 0.18 LEU 174 -0.11 VAL 187
GLU 234 0.19 ARG 175 -0.10 ALA 139
GLU 234 0.21 ASN 176 -0.14 ALA 139
GLU 234 0.15 VAL 177 -0.15 VAL 187
GLU 234 0.11 THR 178 -0.10 VAL 187
GLU 234 0.13 VAL 179 -0.14 ALA 139
GLU 234 0.13 VAL 180 -0.18 VAL 187
LEU 211 0.10 LEU 181 -0.18 ALA 184
LEU 211 0.09 TRP 182 -0.10 ILE 222
ALA 184 0.13 SER 183 -0.16 ALA 139
SER 183 0.13 ALA 184 -0.18 LEU 181
LEU 146 0.10 TYR 185 -0.11 GLY 218
LEU 146 0.10 PRO 186 -0.15 VAL 180
LEU 146 0.11 VAL 187 -0.18 VAL 180
LEU 146 0.11 VAL 188 -0.14 GLY 218
MET 118 0.07 TRP 189 -0.11 VAL 180
THR 142 0.08 LEU 190 -0.14 VAL 180
LEU 146 0.07 ILE 191 -0.13 GLY 218
LEU 146 0.06 GLY 192 -0.13 GLY 72
GLY 197 0.05 SER 193 -0.14 GLY 72
PHE 88 0.05 GLU 194 -0.09 VAL 180
GLY 113 0.06 GLY 195 -0.12 VAL 180
GLY 113 0.06 ALA 196 -0.15 GLY 72
ARG 7 0.05 GLY 197 -0.19 GLY 72
LEU 146 0.07 ILE 198 -0.16 GLY 72
PRO 200 0.09 VAL 199 -0.15 GLY 72
VAL 199 0.09 PRO 200 -0.19 GLU 74
LEU 146 0.05 LEU 201 -0.15 GLU 74
LEU 146 0.06 ASN 202 -0.14 GLU 74
LEU 146 0.09 ILE 203 -0.13 GLU 74
LEU 146 0.08 GLU 204 -0.12 GLU 74
LEU 146 0.06 THR 205 -0.09 GLU 74
SER 183 0.09 LEU 206 -0.13 TYR 26
SER 183 0.12 LEU 207 -0.14 LEU 221
SER 183 0.07 PHE 208 -0.10 LEU 221
LEU 181 0.09 MET 209 -0.12 TYR 26
LEU 181 0.09 VAL 210 -0.16 LEU 221
LEU 181 0.10 LEU 211 -0.18 GLY 218
THR 178 0.07 ASP 212 -0.08 LEU 221
SER 214 0.15 VAL 213 -0.13 TYR 26
VAL 213 0.15 SER 214 -0.22 GLY 218
VAL 213 0.09 ALA 215 -0.11 LEU 221
LEU 174 0.07 LYS 216 -0.10 LEU 211
GLY 218 0.16 VAL 217 -0.14 VAL 210
VAL 217 0.16 GLY 218 -0.22 SER 214
VAL 217 0.09 PHE 219 -0.12 ALA 184
GLY 23 0.08 GLY 220 -0.13 SER 214
GLY 23 0.11 LEU 221 -0.17 SER 214
GLU 234 0.14 ILE 222 -0.14 ALA 184
GLU 234 0.08 LEU 223 -0.10 ALA 184
PHE 88 0.07 LEU 224 -0.11 SER 214
GLU 234 0.11 ARG 225 -0.12 VAL 210
GLU 234 0.23 SER 226 -0.12 ALA 184
GLU 234 0.26 ARG 227 -0.09 ALA 184
GLU 234 0.25 ALA 228 -0.07 VAL 187
GLY 116 0.09 ILE 229 -0.06 VAL 210
GLY 116 0.09 PHE 230 -0.11 GLU 234
GLY 116 0.09 GLY 231 -0.20 ALA 233
GLU 234 0.16 GLU 232 -0.14 SER 35
GLU 166 0.20 ALA 233 -0.38 ASP 36
PRO 165 0.71 GLU 234 -0.85 SER 35

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.