Should you encounter any unexpected behaviour,
please let us know.

* 1P5V_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *

CA distance fluctuations for 240220090321150899

--- normal mode 13 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
TYR 37 0.45 PHE 1 -0.87 PRO 160

ASP 36 0.39 ALA 2 -1.07 PRO 160

ASP 36 0.34 SER 3 -0.85 PHE 102

ASP 36 0.44 LYS 4 -0.45 ASN 106

LYS 157 0.17 GLU 5 -0.55 ASN 106

LYS 157 0.26 TYR 6 -0.27 ASN 106

SER 158 0.36 GLY 7 -0.33 GLU 5

SER 158 0.38 VAL 8 -0.30 GLU 5

SER 158 0.43 THR 9 -0.42 GLU 5

PRO 160 0.42 ILE 10 -0.42 ALA 2

SER 158 0.40 GLY 11 -0.40 ALA 2

GLY 150 0.40 GLU 12 -0.54 ALA 2

GLY 150 0.45 SER 13 -0.73 ALA 2

SER 161 0.32 ARG 14 -0.69 ALA 2

PRO 160 0.28 ILE 15 -0.58 ALA 2

PRO 160 0.20 ILE 16 -0.57 ALA 2

PRO 160 0.19 TYR 17 -0.50 ALA 2

PRO 160 0.14 PRO 18 -0.47 ALA 2

PRO 160 0.13 LEU 19 -0.45 ALA 2

PRO 160 0.12 ASP 20 -0.38 ALA 2

PRO 160 0.11 ALA 21 -0.35 ALA 2

PRO 160 0.12 ALA 22 -0.30 ALA 2

PRO 160 0.15 GLY 23 -0.30 SER 3

PRO 160 0.18 VAL 24 -0.31 SER 3

PRO 160 0.18 MET 25 -0.32 ALA 2

PRO 160 0.22 VAL 26 -0.28 SER 3

PRO 160 0.24 SER 27 -0.35 ALA 2

PRO 160 0.28 SER 28 -0.28 ALA 2

PRO 160 0.33 VAL 29 -0.32 ALA 2

SER 158 0.34 VAL 30 -0.24 ALA 2

SER 158 0.36 VAL 31 -0.24 GLU 5

SER 158 0.37 LYS 32 -0.16 GLU 5

SER 158 0.34 ASN 33 -0.08 GLY 7

SER 158 0.33 THR 34 -0.09 GLY 97

LYS 4 0.33 GLN 35 -0.10 GLY 97

LYS 4 0.44 ASP 36 -0.12 GLY 97

PHE 1 0.45 TYR 37 -0.08 ILE 104

PHE 1 0.36 PRO 38 -0.08 GLY 7

SER 158 0.27 VAL 39 -0.11 SER 3

SER 158 0.28 LEU 40 -0.20 SER 3

PRO 160 0.31 ILE 41 -0.29 SER 3

PRO 160 0.32 GLN 42 -0.40 SER 3

PRO 160 0.34 SER 43 -0.45 SER 3

PRO 160 0.33 ARG 44 -0.54 SER 3

PRO 160 0.31 ILE 45 -0.58 SER 3

PRO 160 0.30 TYR 46 -0.65 SER 3

PRO 160 0.25 ASP 47 -0.58 SER 3

PRO 160 0.22 PRO 48 -0.52 SER 3

PRO 160 0.20 PHE 49 -0.48 SER 3

PRO 160 0.23 VAL 50 -0.48 SER 3

PRO 160 0.25 VAL 51 -0.44 SER 3

PRO 160 0.28 VAL 52 -0.40 SER 3

PRO 160 0.27 THR 53 -0.30 SER 3

PRO 160 0.27 PRO 54 -0.27 SER 3

PRO 160 0.29 PRO 55 -0.34 SER 3

PRO 160 0.28 LEU 56 -0.28 SER 3

PRO 160 0.27 PHE 57 -0.18 SER 3

SER 158 0.27 ARG 58 -0.10 SER 3

SER 158 0.29 LEU 59 -0.08 GLY 7

PHE 1 0.30 ASP 60 -0.06 GLY 7

PHE 1 0.34 ALA 61 -0.05 GLY 7

SER 158 0.31 LYS 62 -0.06 GLY 97

SER 158 0.32 GLN 63 -0.04 GLY 7

SER 158 0.35 GLN 64 -0.08 GLU 5

SER 158 0.32 ASN 65 -0.12 GLU 5

SER 158 0.30 SER 66 -0.17 GLU 5

PRO 160 0.28 SER 67 -0.17 SER 3

PRO 160 0.29 LEU 68 -0.28 SER 3

PRO 160 0.26 ARG 69 -0.30 SER 3

PRO 160 0.25 ILE 70 -0.38 SER 3

PRO 160 0.21 ALA 71 -0.37 SER 3

PRO 160 0.19 GLN 72 -0.41 SER 3

PRO 160 0.19 ALA 73 -0.39 SER 3

PRO 160 0.17 GLY 74 -0.41 SER 3

PRO 160 0.15 GLY 75 -0.45 SER 3

PRO 160 0.12 VAL 76 -0.45 SER 3

PRO 160 0.12 PHE 77 -0.50 ALA 2

PRO 160 0.08 PRO 78 -0.54 ALA 2

PRO 160 0.07 ARG 79 -0.51 ALA 2

PRO 160 0.04 ASP 80 -0.56 ALA 2

PRO 160 0.06 LYS 81 -0.61 ALA 2

PRO 160 0.10 GLU 82 -0.64 ALA 2

PRO 160 0.15 SER 83 -0.64 ALA 2

PRO 160 0.21 LEU 84 -0.70 ALA 2

PRO 160 0.28 LYS 85 -0.66 SER 3

PRO 160 0.35 TRP 86 -0.71 SER 3

PRO 160 0.37 LEU 87 -0.61 SER 3

PRO 160 0.41 CYS 88 -0.66 SER 3

PRO 160 0.39 VAL 89 -0.53 SER 3

PRO 160 0.35 LYS 90 -0.54 SER 3

SER 158 0.32 GLY 91 -0.38 SER 3

SER 158 0.28 ILE 92 -0.34 SER 3

PHE 1 0.29 PRO 93 -0.22 SER 3

PHE 1 0.37 LYS 94 -0.15 SER 3

PHE 1 0.41 ASP 95 -0.19 SER 3

PHE 1 0.29 VAL 96 -0.39 SER 3

PHE 1 0.36 GLY 97 -0.33 SER 3

PHE 1 0.34 VAL 98 -0.41 SER 3

PHE 1 0.35 PHE 99 -0.44 SER 3

PRO 93 0.14 VAL 100 -0.72 SER 3

ILE 92 0.16 GLN 101 -0.76 SER 3

LYS 157 0.22 PHE 102 -0.85 SER 3

SER 158 0.30 ALA 103 -0.64 SER 3

SER 158 0.36 ILE 104 -0.70 SER 3

PRO 160 0.39 ASN 105 -0.82 SER 3

PRO 160 0.47 ASN 106 -0.75 SER 3

PRO 160 0.48 CYS 107 -0.78 SER 3

PRO 160 0.46 ILE 108 -0.71 ALA 2

PRO 160 0.34 LYS 109 -0.75 ALA 2

PRO 160 0.29 LEU 110 -0.63 ALA 2

PRO 160 0.21 LEU 111 -0.65 ALA 2

PRO 160 0.17 VAL 112 -0.57 ALA 2

PRO 160 0.13 ARG 113 -0.56 ALA 2

PRO 160 0.10 PRO 114 -0.51 ALA 2

GLN 185 0.09 ASN 115 -0.47 ALA 2

GLN 185 0.07 GLU 116 -0.48 ALA 2

GLN 185 0.05 LEU 117 -0.54 ALA 2

GLN 185 0.04 LYS 118 -0.53 ALA 2

LYS 167 0.05 GLY 119 -0.57 ALA 2

GLN 64 0.05 THR 120 -0.62 ALA 2

GLN 64 0.08 PRO 121 -0.69 ALA 2

GLN 64 0.10 ILE 122 -0.68 ALA 2

GLN 64 0.08 GLN 123 -0.63 ALA 2

GLN 64 0.08 PHE 124 -0.66 ALA 2

GLN 64 0.12 ALA 125 -0.71 ALA 2

GLN 64 0.12 GLU 126 -0.66 ALA 2

GLN 64 0.09 ASN 127 -0.65 ALA 2

SER 13 0.11 LEU 128 -0.71 ALA 2

SER 13 0.12 SER 129 -0.68 ALA 2

SER 13 0.14 TRP 130 -0.70 ALA 2

SER 13 0.14 LYS 131 -0.67 ALA 2

ASN 106 0.17 VAL 132 -0.67 ALA 2

CYS 107 0.16 ASP 133 -0.66 ALA 2

ASN 106 0.18 GLY 134 -0.66 ALA 2

ASN 106 0.23 GLY 135 -0.68 ALA 2

CYS 107 0.22 LYS 136 -0.75 ALA 2

CYS 107 0.21 LEU 137 -0.76 ALA 2

SER 13 0.16 ILE 138 -0.76 ALA 2

SER 13 0.14 ALA 139 -0.78 ALA 2

SER 13 0.10 GLU 140 -0.73 ALA 2

GLN 64 0.07 ASN 141 -0.74 ALA 2

ASN 141 0.05 PRO 142 -0.67 ALA 2

LYS 167 0.05 SER 143 -0.67 ALA 2

GLY 119 0.05 PRO 144 -0.65 ALA 2

SER 66 0.05 PHE 145 -0.70 ALA 2

SER 28 0.08 TYR 146 -0.78 ALA 2

VAL 29 0.12 MET 147 -0.82 ALA 2

SER 13 0.19 ASN 148 -0.90 ALA 2

SER 13 0.32 ILE 149 -0.93 ALA 2

SER 13 0.45 GLY 150 -0.96 ALA 2

SER 13 0.40 GLU 151 -0.92 ALA 2

SER 13 0.35 LEU 152 -0.88 ALA 2

THR 9 0.32 THR 153 -0.79 ALA 2

THR 9 0.29 PHE 154 -0.73 ALA 2

THR 9 0.30 GLY 155 -0.64 ALA 2

THR 9 0.34 GLY 156 -0.65 ALA 2

THR 9 0.39 LYS 157 -0.73 ALA 2

THR 9 0.43 SER 158 -0.85 ALA 2

ASN 106 0.41 ILE 159 -0.93 ALA 2

CYS 107 0.48 PRO 160 -1.07 ALA 2

ILE 108 0.43 SER 161 -1.04 ALA 2

ILE 108 0.32 HIS 162 -1.04 ALA 2

LEU 110 0.17 TYR 163 -0.95 ALA 2

VAL 29 0.11 ILE 164 -0.86 ALA 2

SER 28 0.06 PRO 165 -0.80 ALA 2

PRO 165 0.05 PRO 166 -0.73 ALA 2

SER 143 0.05 LYS 167 -0.70 ALA 2

PRO 142 0.05 SER 168 -0.75 ALA 2

SER 13 0.08 THR 169 -0.77 ALA 2

ILE 108 0.13 TRP 170 -0.84 ALA 2

ILE 108 0.18 ALA 171 -0.83 ALA 2

CYS 107 0.27 PHE 172 -0.86 ALA 2

CYS 107 0.31 ASP 173 -0.81 ALA 2

ASN 106 0.29 LEU 174 -0.74 ALA 2

ASN 106 0.26 PRO 175 -0.67 ALA 2

THR 9 0.24 ASN 176 -0.65 ALA 2

GLY 11 0.23 VAL 177 -0.71 ALA 2

GLY 11 0.25 SER 178 -0.73 ALA 2

SER 13 0.26 TRP 179 -0.80 ALA 2

SER 13 0.26 ARG 180 -0.82 ALA 2

SER 13 0.22 ILE 181 -0.83 ALA 2

GLU 12 0.23 ILE 182 -0.86 ALA 2

SER 28 0.17 ASN 183 -0.75 ALA 2

SER 28 0.17 ASP 184 -0.69 ALA 2

SER 28 0.26 GLN 185 -0.67 ALA 2

GLU 12 0.28 GLY 186 -0.79 ALA 2

SER 66 0.24 GLY 187 -0.79 ALA 2

GLU 12 0.28 LEU 188 -0.81 ALA 2

GLN 64 0.19 ASP 189 -0.74 ALA 2

GLN 64 0.19 ARG 190 -0.68 ALA 2

GLY 11 0.22 LEU 191 -0.70 ALA 2

GLY 11 0.18 TYR 192 -0.69 ALA 2

GLY 11 0.19 SER 193 -0.66 ALA 2

GLY 11 0.16 LYS 194 -0.63 ALA 2

THR 9 0.17 ASN 195 -0.59 ALA 2

THR 9 0.16 VAL 196 -0.62 ALA 2

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1P5V_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 ***

CA distance fluctuations for 240220090321150899

--- normal mode 13 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1P5V_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *