CNRS Nantes University US2B US2B
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***  bacteriorhodopsin  ***

<R2> analysis for 2404222055381936730

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1924
ILE 40.0023
THR 50.0033
GLY 60.0036
ARG 70.0033
PRO 80.0038
GLU 90.0031
TRP 100.0027
ILE 110.0034
TRP 120.0030
LEU 130.0021
ALA 140.0026
LEU 150.0032
GLY 160.0026
THR 170.0025
ALA 180.0032
LEU 190.0035
MET 200.0031
GLY 210.0035
LEU 220.0040
GLY 230.0039
THR 240.0039
LEU 250.0045
TYR 260.0044
PHE 270.0042
LEU 280.0045
VAL 290.0048
LYS 300.0044
GLY 310.0044
MET 320.0049
GLY 330.0045
VAL 340.0040
SER 350.0040
ASP 360.0031
PRO 370.0040
ASP 380.0035
ALA 390.0035
LYS 400.0041
LYS 410.0040
PHE 420.0039
TYR 430.0042
ALA 440.0041
ILE 450.0038
THR 460.0037
THR 470.0039
LEU 480.0035
VAL 490.0032
PRO 500.0031
ALA 510.0032
ILE 520.0026
ALA 530.0022
PHE 540.0024
THR 550.0020
MET 560.0013
TYR 570.0014
LEU 580.0014
SER 590.0005
MET 600.0006
LEU 610.0013
LEU 620.0008
GLY 630.0011
TYR 640.0009
GLY 650.0008
LEU 660.0016
THR 670.0025
MET 680.0035
VAL 690.0040
PRO 700.0050
PHE 710.0051
GLY 720.0058
GLY 730.0066
GLU 740.0058
GLN 750.0050
ASN 760.0040
PRO 770.0030
ILE 780.0022
TYR 790.0012
TRP 800.0013
ALA 810.0007
ARG 820.0003
TYR 830.0010
ALA 840.0016
ASP 850.0015
TRP 860.0015
LEU 870.0020
PHE 880.0025
THR 890.0025
THR 900.0023
PRO 910.0028
LEU 920.0032
LEU 930.0031
LEU 940.0031
LEU 950.0034
ASP 960.0036
LEU 970.0036
ALA 980.0037
LEU 990.0039
LEU 1000.0038
VAL 1010.0040
ASP 1020.0043
ALA 1030.0041
ASP 1040.0044
GLN 1050.0043
GLY 1060.0041
THR 1070.0038
ILE 1080.0036
LEU 1090.0035
ALA 1100.0034
LEU 1110.0030
VAL 1120.0030
GLY 1130.0030
ALA 1140.0026
ASP 1150.0023
GLY 1160.0025
ILE 1170.0024
MET 1180.0017
ILE 1190.0015
GLY 1200.0023
THR 1210.0022
GLY 1220.0015
LEU 1230.0019
VAL 1240.0029
GLY 1250.0026
ALA 1260.0023
LEU 1270.0032
THR 1280.0039
LYS 1290.0048
VAL 1300.0051
TYR 1310.0047
SER 1320.0045
TYR 1330.0042
ARG 1340.0033
PHE 1350.0029
VAL 1360.0030
TRP 1370.0026
TRP 1380.0017
ALA 1390.0016
ILE 1400.0020
SER 1410.0014
THR 1420.0007
ALA 1430.0013
ALA 1440.0018
MET 1450.0015
LEU 1460.0016
TYR 1470.0022
ILE 1480.0025
LEU 1490.0024
TYR 1500.0027
VAL 1510.0032
LEU 1520.0033
PHE 1530.0034
PHE 1540.0036
GLY 1550.0038
PHE 1560.0039
THR 1570.0040
SER 1580.0043
LYS 1590.0043
ALA 1600.0044
GLU 1610.0047
SER 1620.0047
MET 1630.0044
ARG 1640.0037
PRO 1650.0046
GLU 1660.0037
VAL 1670.0040
ALA 1680.0043
SER 1690.0043
THR 1700.0039
PHE 1710.0039
LYS 1720.0038
VAL 1730.0037
LEU 1740.0035
ARG 1750.0034
ASN 1760.0032
VAL 1770.0031
THR 1780.0028
VAL 1790.0025
VAL 1800.0023
LEU 1810.0022
TRP 1820.0018
SER 1830.0015
ALA 1840.0016
TYR 1850.0009
PRO 1860.0006
VAL 1870.0016
VAL 1880.0019
TRP 1890.0015
LEU 1900.0022
ILE 1910.0030
GLY 1920.0029
SER 1930.0031
GLU 1940.0025
GLY 1950.0030
ALA 1960.0038
GLY 1970.0040
ILE 1980.0043
VAL 1990.0039
PRO 2000.0040
LEU 2010.0032
ASN 2020.0034
ILE 2030.0036
GLU 2040.0027
THR 2050.0023
LEU 2060.0030
LEU 2070.0027
PHE 2080.0018
MET 2090.0023
VAL 2100.0029
LEU 2110.0024
ASP 2120.0021
VAL 2130.0029
SER 2140.0031
ALA 2150.0028
LYS 2160.0030
VAL 2170.0035
GLY 2180.0034
PHE 2190.0034
GLY 2200.0035
LEU 2210.0037
ILE 2220.0036
LEU 2230.0037
LEU 2240.0037
ARG 2250.0037
SER 2260.0032
ARG 2270.0027
ALA 2280.0031
ILE 2290.0033
PHE 2300.0018
GLY 2310.0034
GLU 2320.0184
ALA 2330.0580
GLU 2340.1924

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.