CNRS Nantes University US2B US2B
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***  bacteriorhodopsin  ***

<R2> analysis for 2404222055381936730

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0370
ILE 40.0244
THR 50.0275
GLY 60.0309
ARG 70.0253
PRO 80.0255
GLU 90.0185
TRP 100.0176
ILE 110.0185
TRP 120.0131
LEU 130.0083
ALA 140.0082
LEU 150.0100
GLY 160.0064
THR 170.0031
ALA 180.0067
LEU 190.0114
MET 200.0121
GLY 210.0133
LEU 220.0188
GLY 230.0181
THR 240.0184
LEU 250.0229
TYR 260.0230
PHE 270.0182
LEU 280.0220
VAL 290.0257
LYS 300.0190
GLY 310.0163
MET 320.0240
GLY 330.0181
VAL 340.0105
SER 350.0167
ASP 360.0159
PRO 370.0212
ASP 380.0171
ALA 390.0086
LYS 400.0135
LYS 410.0137
PHE 420.0067
TYR 430.0104
ALA 440.0133
ILE 450.0111
THR 460.0105
THR 470.0148
LEU 480.0138
VAL 490.0126
PRO 500.0133
ALA 510.0143
ILE 520.0109
ALA 530.0101
PHE 540.0084
THR 550.0088
MET 560.0064
TYR 570.0022
LEU 580.0053
SER 590.0107
MET 600.0092
LEU 610.0112
LEU 620.0173
GLY 630.0193
TYR 640.0197
GLY 650.0136
LEU 660.0158
THR 670.0193
MET 680.0226
VAL 690.0190
PRO 700.0226
PHE 710.0158
GLY 720.0194
GLY 730.0303
GLU 740.0304
GLN 750.0289
ASN 760.0189
PRO 770.0169
ILE 780.0098
TYR 790.0078
TRP 800.0084
ALA 810.0078
ARG 820.0045
TYR 830.0082
ALA 840.0096
ASP 850.0090
TRP 860.0096
LEU 870.0105
PHE 880.0108
THR 890.0110
THR 900.0109
PRO 910.0098
LEU 920.0093
LEU 930.0083
LEU 940.0048
LEU 950.0060
ASP 960.0032
LEU 970.0023
ALA 980.0088
LEU 990.0113
LEU 1000.0115
VAL 1010.0165
ASP 1020.0210
ALA 1030.0185
ASP 1040.0232
GLN 1050.0242
GLY 1060.0196
THR 1070.0130
ILE 1080.0126
LEU 1090.0163
ALA 1100.0109
LEU 1110.0079
VAL 1120.0109
GLY 1130.0132
ALA 1140.0129
ASP 1150.0128
GLY 1160.0133
ILE 1170.0160
MET 1180.0156
ILE 1190.0129
GLY 1200.0148
THR 1210.0158
GLY 1220.0115
LEU 1230.0100
VAL 1240.0135
GLY 1250.0098
ALA 1260.0055
LEU 1270.0113
THR 1280.0129
LYS 1290.0138
VAL 1300.0096
TYR 1310.0016
SER 1320.0074
TYR 1330.0119
ARG 1340.0078
PHE 1350.0122
VAL 1360.0176
TRP 1370.0162
TRP 1380.0149
ALA 1390.0196
ILE 1400.0211
SER 1410.0178
THR 1420.0186
ALA 1430.0203
ALA 1440.0164
MET 1450.0152
LEU 1460.0137
TYR 1470.0105
ILE 1480.0085
LEU 1490.0087
TYR 1500.0055
VAL 1510.0005
LEU 1520.0034
PHE 1530.0082
PHE 1540.0099
GLY 1550.0114
PHE 1560.0125
THR 1570.0167
SER 1580.0246
LYS 1590.0244
ALA 1600.0237
GLU 1610.0323
SER 1620.0370
MET 1630.0329
ARG 1640.0355
PRO 1650.0364
GLU 1660.0286
VAL 1670.0218
ALA 1680.0248
SER 1690.0260
THR 1700.0172
PHE 1710.0134
LYS 1720.0173
VAL 1730.0175
LEU 1740.0102
ARG 1750.0093
ASN 1760.0119
VAL 1770.0120
THR 1780.0093
VAL 1790.0102
VAL 1800.0102
LEU 1810.0111
TRP 1820.0121
SER 1830.0130
ALA 1840.0133
TYR 1850.0124
PRO 1860.0133
VAL 1870.0145
VAL 1880.0111
TRP 1890.0081
LEU 1900.0109
ILE 1910.0135
GLY 1920.0111
SER 1930.0094
GLU 1940.0033
GLY 1950.0063
ALA 1960.0107
GLY 1970.0136
ILE 1980.0186
VAL 1990.0188
PRO 2000.0196
LEU 2010.0156
ASN 2020.0183
ILE 2030.0190
GLU 2040.0121
THR 2050.0099
LEU 2060.0128
LEU 2070.0131
PHE 2080.0082
MET 2090.0085
VAL 2100.0106
LEU 2110.0115
ASP 2120.0102
VAL 2130.0112
SER 2140.0115
ALA 2150.0117
LYS 2160.0121
VAL 2170.0139
GLY 2180.0130
PHE 2190.0099
GLY 2200.0104
LEU 2210.0137
ILE 2220.0122
LEU 2230.0070
LEU 2240.0076
ARG 2250.0122
SER 2260.0139
ARG 2270.0156
ALA 2280.0157
ILE 2290.0091
PHE 2300.0141
GLY 2310.0228
GLU 2320.0335
ALA 2330.0181
GLU 2340.0311

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.