CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1URZ_unrelaxed_rank_001_alphafold2_ptm_model_5_seed_000  ***

<R2> analysis for 240220091131159337

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0619
ARG 10.0049
CYS 20.0042
THR 30.0036
HIS 40.0050
LEU 50.0053
GLU 60.0048
ASN 70.0049
ARG 80.0033
ASP 90.0018
PHE 100.0017
VAL 110.0026
THR 120.0045
GLY 130.0074
THR 140.0095
GLN 150.0108
GLY 160.0118
THR 170.0107
THR 180.0110
ARG 190.0094
VAL 200.0071
THR 210.0055
LEU 220.0031
VAL 230.0040
LEU 240.0045
GLU 250.0088
LEU 260.0120
GLY 270.0114
GLY 280.0075
CYS 290.0047
VAL 300.0027
THR 310.0027
ILE 320.0037
THR 330.0046
ALA 340.0068
GLU 350.0083
GLY 360.0098
LYS 370.0084
PRO 380.0069
SER 390.0050
MET 400.0054
ASP 410.0045
VAL 420.0047
TRP 430.0057
LEU 440.0077
ASP 450.0116
ALA 460.0145
ILE 470.0133
TYR 480.0148
GLN 490.0141
GLU 500.0206
ASN 510.0209
PRO 520.0119
ALA 530.0100
LYS 540.0079
THR 550.0066
ARG 560.0067
GLU 570.0036
TYR 580.0044
CYS 590.0047
LEU 600.0037
HIS 610.0071
ALA 620.0125
LYS 630.0165
LEU 640.0201
SER 650.0219
ASP 660.0228
THR 670.0232
LYS 680.0202
VAL 690.0171
ALA 700.0147
ALA 710.0136
ARG 720.0255
CYS 730.0292
PRO 740.0429
THR 750.0619
MET 760.0560
GLY 770.0559
PRO 780.0425
ALA 790.0253
THR 800.0260
LEU 810.0195
ALA 820.0253
GLU 830.0162
GLU 840.0154
HIS 850.0207
GLN 860.0157
GLY 870.0108
GLY 880.0138
THR 890.0124
VAL 900.0134
CYS 910.0132
LYS 920.0187
ARG 930.0248
ASP 940.0296
GLN 950.0347
SER 960.0305
ASP 970.0343
ARG 980.0206
GLY 990.0165
TRP 1000.0138
GLY 1010.0274
ASN 1020.0225
HIS 1030.0261
CYS 1040.0202
GLY 1050.0283
LEU 1060.0338
PHE 1070.0340
GLY 1080.0432
LYS 1090.0425
GLY 1100.0303
SER 1110.0280
ILE 1120.0162
VAL 1130.0124
ALA 1140.0130
CYS 1150.0129
VAL 1160.0168
LYS 1170.0169
ALA 1180.0163
ALA 1190.0161
CYS 1200.0114
GLU 1210.0131
ALA 1220.0167
LYS 1230.0148
LYS 1240.0090
LYS 1250.0065
ALA 1260.0080
THR 1270.0068
GLY 1280.0055
HIS 1290.0050
VAL 1300.0017
TYR 1310.0033
ASP 1320.0072
ALA 1330.0062
ASN 1340.0110
LYS 1350.0121
ILE 1360.0080
VAL 1370.0111
TYR 1380.0088
THR 1390.0109
VAL 1400.0079
LYS 1410.0089
VAL 1420.0078
GLU 1430.0073
PRO 1440.0069
HIS 1450.0072
THR 1460.0107
ARG 1470.0114
LYS 1480.0116
THR 1490.0127
ALA 1500.0118
SER 1510.0118
PHE 1520.0096
THR 1530.0094
ILE 1540.0095
SER 1550.0134
SER 1560.0130
GLU 1570.0100
LYS 1580.0115
THR 1590.0130
ILE 1600.0138
LEU 1610.0132
THR 1620.0144
MET 1630.0120
GLY 1640.0132
GLU 1650.0111
TYR 1660.0105
GLY 1670.0131
ASP 1680.0132
VAL 1690.0112
SER 1700.0114
LEU 1710.0090
LEU 1720.0088
CYS 1730.0060
ARG 1740.0059
VAL 1750.0041
ALA 1760.0057
SER 1770.0051
GLY 1780.0093
VAL 1790.0130
ASP 1800.0145
LEU 1810.0101
ALA 1820.0147
GLN 1830.0203
THR 1840.0162
VAL 1850.0124
ILE 1860.0142
LEU 1870.0154
GLU 1880.0184
LEU 1890.0208
ASP 1900.0292
PRO 1910.0371
THR 1920.0346
ALA 1930.0273
TRP 1940.0276
GLN 1950.0239
VAL 1960.0245
HIS 1970.0260
ARG 1980.0213
ASP 1990.0288
TRP 2000.0292
PHE 2010.0198
ASN 2020.0212
ASP 2030.0272
LEU 2040.0212
ALA 2050.0161
LEU 2060.0111
PRO 2070.0109
TRP 2080.0105
LYS 2090.0126
HIS 2100.0132
GLU 2110.0134
GLY 2120.0195
ALA 2130.0200
GLN 2140.0207
ASN 2150.0183
TRP 2160.0145
ASN 2170.0161
ASN 2180.0164
ALA 2190.0124
GLU 2200.0138
ARG 2210.0135
LEU 2220.0114
VAL 2230.0170
GLU 2240.0234
PHE 2250.0284
GLY 2260.0364
ALA 2270.0414
PRO 2280.0325
HIS 2290.0361
ALA 2300.0243
VAL 2310.0187
LYS 2320.0283
MET 2330.0280
ASP 2340.0348
VAL 2350.0287
TYR 2360.0297
ASN 2370.0185
LEU 2380.0149
GLY 2390.0087
ASP 2400.0053
GLN 2410.0085
THR 2420.0142
GLY 2430.0245
VAL 2440.0259
LEU 2450.0248
LEU 2460.0329
LYS 2470.0413
ALA 2480.0383
LEU 2490.0378
ALA 2500.0483
GLY 2510.0516
VAL 2520.0416
PRO 2530.0390
VAL 2540.0372
ALA 2550.0291
HIS 2560.0322
ILE 2570.0304
GLU 2580.0359
GLY 2590.0376
THR 2600.0304
LYS 2610.0252
TYR 2620.0198
HIS 2630.0211
LEU 2640.0184
LYS 2650.0248
SER 2660.0199
GLY 2670.0113
HIS 2680.0081
VAL 2690.0035
THR 2700.0035
CYS 2710.0046
GLU 2720.0068
VAL 2730.0076
GLY 2740.0101
LEU 2750.0102
GLU 2760.0128
LYS 2770.0137
LEU 2780.0113
LYS 2790.0111
MET 2800.0087
LYS 2810.0067
GLY 2820.0056
LEU 2830.0079
THR 2840.0091
TYR 2850.0079
THR 2860.0098
MET 2870.0097
CYS 2880.0093
ASP 2890.0118
LYS 2900.0108
THR 2910.0126
LYS 2920.0121
PHE 2930.0096
THR 2940.0101
TRP 2950.0091
LYS 2960.0097
ARG 2970.0088
ALA 2980.0081
PRO 2990.0067
THR 3000.0083
ASP 3010.0088
SER 3020.0066
GLY 3030.0066
HIS 3040.0055
ASP 3050.0085
THR 3060.0059
VAL 3070.0055
VAL 3080.0050
MET 3090.0055
GLU 3100.0063
VAL 3110.0072
THR 3120.0091
PHE 3130.0096
SER 3140.0122
GLY 3150.0122
THR 3160.0116
LYS 3170.0083
PRO 3180.0066
CYS 3190.0069
ARG 3200.0064
ILE 3210.0057
PRO 3220.0069
VAL 3230.0045
ARG 3240.0043
ALA 3250.0029
VAL 3260.0039
ALA 3270.0057
HIS 3280.0054
GLY 3290.0063
SER 3300.0074
PRO 3310.0056
ASP 3320.0089
VAL 3330.0090
ASN 3340.0072
VAL 3350.0073
ALA 3360.0053
MET 3370.0054
LEU 3380.0039
ILE 3390.0035
THR 3400.0031
PRO 3410.0044
ASN 3420.0044
PRO 3430.0033
THR 3440.0035
ILE 3450.0047
GLU 3460.0047
ASN 3470.0075
ASN 3480.0092
GLY 3490.0086
GLY 3500.0071
GLY 3510.0043
PHE 3520.0035
ILE 3530.0027
GLU 3540.0029
MET 3550.0031
GLN 3560.0051
LEU 3570.0068
PRO 3580.0104
PRO 3590.0139
GLY 3600.0118
ASP 3610.0080
ASN 3620.0047
ILE 3630.0028
ILE 3640.0028
TYR 3650.0044
VAL 3660.0056
GLY 3670.0082
GLU 3680.0094
LEU 3690.0080
SER 3700.0062
HIS 3710.0065
GLN 3720.0065
TRP 3730.0079
PHE 3740.0106
GLN 3750.0115
LYS 3760.0177
GLY 3770.0248
SER 3780.0299
SER 3790.0302
ILE 3800.0435
GLY 3810.0537
ARG 3820.0419

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.