CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  EXP_4XFX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

<R2> analysis for 24021912421241012

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1111
MET 10.0976
VAL 20.0877
HIS 30.0431
GLN 40.0441
ALA 50.0087
ILE 60.0103
SER 70.0192
PRO 80.0208
ARG 90.0163
THR 100.0069
LEU 110.0054
ASN 120.0046
ALA 130.0061
TRP 140.0081
VAL 150.0113
LYS 160.0132
VAL 170.0161
VAL 180.0176
GLU 190.0209
GLU 200.0237
LYS 210.0223
ALA 220.0218
PHE 230.0207
SER 240.0233
PRO 250.0209
GLU 260.0226
VAL 270.0196
ILE 280.0191
PRO 290.0202
MET 300.0173
PHE 310.0127
SER 320.0134
ALA 330.0143
LEU 340.0088
SER 350.0045
GLU 360.0076
GLY 370.0088
ALA 380.0072
THR 390.0112
PRO 400.0122
GLN 410.0148
ASP 420.0133
LEU 430.0111
ASN 440.0167
THR 450.0160
MET 460.0122
LEU 470.0166
ASN 480.0208
THR 490.0157
VAL 500.0188
GLY 510.0204
GLY 520.0225
HIS 530.0225
GLN 540.0266
ALA 550.0280
ALA 560.0236
MET 570.0231
GLN 580.0302
MET 590.0284
LEU 600.0232
LYS 610.0270
GLU 620.0327
THR 630.0271
ILE 640.0212
ASN 650.0266
GLU 660.0279
GLU 670.0178
ALA 680.0135
ALA 690.0148
GLU 700.0136
TRP 710.0070
ASP 720.0063
ARG 730.0074
LEU 740.0184
HIS 750.0190
PRO 760.0228
VAL 770.0214
HIS 780.0070
ALA 790.0173
GLY 800.0329
PRO 810.0568
ILE 820.0338
ALA 830.0577
PRO 840.0641
GLY 850.0132
GLN 860.0174
MET 870.0254
ARG 880.0225
GLU 890.0194
PRO 900.0159
ARG 910.0114
GLY 920.0087
SER 930.0139
ASP 940.0144
ILE 950.0100
ALA 960.0139
GLY 970.0172
THR 980.0226
THR 990.0222
SER 1000.0210
THR 1010.0247
LEU 1020.0188
GLN 1030.0235
GLU 1040.0212
GLN 1050.0147
ILE 1060.0144
GLY 1070.0188
TRP 1080.0165
MET 1090.0155
THR 1100.0150
HIS 1110.0166
ASN 1120.0182
PRO 1130.0179
PRO 1140.0146
ILE 1150.0143
PRO 1160.0099
VAL 1170.0086
GLY 1180.0062
GLU 1190.0057
ILE 1200.0054
TYR 1210.0070
LYS 1220.0075
ARG 1230.0127
TRP 1240.0138
ILE 1250.0149
ILE 1260.0172
LEU 1270.0204
GLY 1280.0213
LEU 1290.0187
ASN 1300.0214
LYS 1310.0254
ILE 1320.0224
VAL 1330.0196
ARG 1340.0199
MET 1350.0229
TYR 1360.0226
SER 1370.0174
PRO 1380.0213
THR 1390.0169
SER 1400.0170
ILE 1410.0163
LEU 1420.0195
ASP 1430.0207
ILE 1440.0189
ARG 1450.0211
GLN 1460.0163
GLY 1470.0137
PRO 1480.0086
LYS 1490.0051
GLU 1500.0086
PRO 1510.0068
PHE 1520.0105
ARG 1530.0133
ASP 1540.0137
TYR 1550.0153
VAL 1560.0153
ASP 1570.0141
ARG 1580.0150
PHE 1590.0134
TYR 1600.0115
LYS 1610.0113
THR 1620.0124
LEU 1630.0096
ARG 1640.0141
ALA 1650.0165
GLU 1660.0139
GLN 1670.0171
ALA 1680.0162
SER 1690.0255
GLN 1700.0222
GLU 1710.0186
VAL 1720.0126
LYS 1730.0086
ASN 1740.0084
TRP 1750.0097
MET 1760.0114
THR 1770.0100
GLU 1780.0142
THR 1790.0190
LEU 1800.0200
LEU 1810.0214
VAL 1820.0222
GLN 1830.0252
ASN 1840.0227
ALA 1850.0190
ASN 1860.0140
PRO 1870.0148
ASP 1880.0141
CYS 1890.0153
LYS 1900.0211
THR 1910.0278
ILE 1920.0293
LEU 1930.0316
LYS 1940.0415
ALA 1950.0579
LEU 1960.0577
GLY 1970.0912
PRO 1980.1111
GLY 1990.0583
ALA 2000.0449
THR 2010.0375
LEU 2020.0291
GLU 2030.0232
GLU 2040.0235
MET 2050.0212
MET 2060.0128
THR 2070.0097
ALA 2080.0187
CYS 2090.0123
GLN 2100.0071
GLY 2110.0088
VAL 2120.0087

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.