CNRS Nantes University US2B US2B
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***  HIV protease  ***

<R2> analysis for 2402051700431573247

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0909
PRO 10.0229
GLN 20.0572
ILE 30.0357
THR 40.0529
LEU 50.0349
TRP 60.0505
GLN 70.0402
ARG 80.0213
PRO 90.0164
LEU 100.0124
VAL 110.0149
THR 120.0165
ILE 130.0151
LYS 140.0160
ILE 150.0117
GLY 160.0132
GLY 170.0190
GLN 180.0174
LEU 190.0176
LYS 200.0126
GLU 210.0102
ALA 220.0097
LEU 230.0115
LEU 240.0134
ASP 250.0114
THR 260.0113
GLY 270.0102
ALA 280.0103
ASP 290.0138
ASP 300.0122
THR 310.0096
VAL 320.0051
LEU 330.0012
GLU 340.0045
GLU 350.0101
MET 360.0115
SER 370.0134
LEU 380.0095
PRO 390.0114
GLY 400.0121
ARG 410.0190
TRP 420.0184
LYS 430.0237
PRO 440.0255
LYS 450.0230
MET 460.0235
ILE 470.0197
GLY 480.0254
GLY 490.0625
ILE 500.0905
GLY 510.0849
GLY 520.0373
PHE 530.0090
ILE 540.0075
LYS 550.0162
VAL 560.0142
ARG 570.0151
GLN 580.0146
TYR 590.0092
ASP 600.0107
GLN 610.0097
ILE 620.0067
LEU 630.0119
ILE 640.0134
GLU 650.0179
ILE 660.0177
CYS 670.0211
GLY 680.0239
HIS 690.0220
LYS 700.0203
ALA 710.0178
ILE 720.0154
GLY 730.0139
THR 740.0113
VAL 750.0068
LEU 760.0070
VAL 770.0064
GLY 780.0086
PRO 790.0083
THR 800.0045
PRO 810.0038
VAL 820.0042
ASN 830.0049
ILE 840.0086
ILE 850.0112
GLY 860.0125
ARG 870.0155
ASN 880.0168
LEU 890.0165
LEU 900.0169
THR 910.0204
GLN 920.0225
ILE 930.0217
GLY 940.0223
CYS 950.0125
THR 960.0197
LEU 970.0491
ASN 980.0765
PHE 990.0909

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.