CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  LYASE/RNA 29-JUN-11 3SNP  ***

<R2> analysis for 22100319494474332

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0325
SER 20.0055
ASN 30.0043
PRO 40.0040
PHE 50.0028
ALA 60.0026
TYR 70.0017
LEU 80.0014
ALA 90.0015
GLU 100.0017
PRO 110.0024
LEU 120.0028
ASP 130.0035
PRO 140.0034
ALA 150.0042
GLN 160.0038
PRO 170.0031
GLY 180.0032
LYS 190.0028
LYS 200.0020
PHE 210.0016
PHE 220.0014
ASN 230.0018
LEU 240.0022
ASN 250.0029
LYS 260.0025
LEU 270.0025
ASP 280.0034
TYR 290.0038
SER 300.0047
ARG 310.0047
TYR 320.0037
GLY 330.0044
ARG 340.0050
LEU 350.0043
PRO 360.0043
PHE 370.0036
SER 380.0031
ILE 390.0032
ARG 400.0027
VAL 410.0021
LEU 420.0025
LEU 430.0027
GLU 440.0018
ALA 450.0019
ALA 460.0027
VAL 470.0026
ARG 480.0021
ASN 490.0034
CYS 500.0042
ASP 510.0056
LYS 520.0068
PHE 530.0079
LEU 540.0070
VAL 550.0056
LYS 560.0064
LYS 570.0050
GLU 580.0058
ASP 590.0052
ILE 600.0042
GLU 610.0050
ASN 620.0048
ILE 630.0040
LEU 640.0038
ASN 650.0049
TRP 660.0050
ASN 670.0053
VAL 680.0058
THR 690.0057
GLN 700.0057
HIS 710.0067
MET 720.0070
ASN 730.0070
ILE 740.0063
GLU 750.0060
VAL 760.0047
PRO 770.0045
PHE 780.0035
LYS 790.0030
PRO 800.0020
ALA 810.0015
ARG 820.0010
VAL 830.0012
ILE 840.0024
LEU 850.0034
GLN 860.0047
ASP 870.0080
PHE 880.0086
THR 890.0071
GLY 900.0059
VAL 910.0080
PRO 920.0071
SER 930.0052
VAL 940.0075
VAL 950.0088
ASP 960.0071
PHE 970.0079
ALA 980.0106
ALA 990.0105
MET 1000.0099
ARG 1010.0123
ASP 1020.0140
ALA 1030.0128
VAL 1040.0143
LYS 1050.0167
LYS 1060.0170
LEU 1070.0172
GLY 1080.0195
GLY 1090.0180
ASP 1100.0173
PRO 1110.0150
GLU 1120.0140
LYS 1130.0134
ILE 1140.0107
ASN 1150.0083
PRO 1160.0052
ILE 1170.0048
CYS 1180.0033
PRO 1190.0028
VAL 1200.0027
ASP 1210.0034
LEU 1220.0048
VAL 1230.0052
ILE 1240.0069
ASP 1250.0072
HIS 1260.0088
SER 1270.0104
GLU 1460.0212
PHE 1470.0190
GLU 1480.0206
ARG 1490.0194
ASN 1500.0159
ARG 1510.0167
GLU 1520.0161
ARG 1530.0130
PHE 1540.0124
GLU 1550.0140
PHE 1560.0124
LEU 1570.0101
LYS 1580.0112
TRP 1590.0123
GLY 1600.0100
SER 1610.0089
LYS 1620.0110
ALA 1630.0113
PHE 1640.0092
ARG 1650.0087
ASN 1660.0046
MET 1670.0048
ARG 1680.0046
ILE 1690.0056
ILE 1700.0061
PRO 1710.0074
PRO 1720.0090
GLY 1730.0089
SER 1740.0070
GLY 1750.0067
ILE 1760.0062
ILE 1770.0060
HIS 1780.0053
GLN 1790.0051
VAL 1800.0047
ASN 1810.0042
LEU 1820.0035
GLU 1830.0036
TYR 1840.0034
LEU 1850.0025
ALA 1860.0024
ARG 1870.0023
VAL 1880.0023
VAL 1890.0020
PHE 1900.0017
ASP 1910.0022
GLN 1920.0023
ASP 1930.0027
GLY 1940.0025
TYR 1950.0018
TYR 1960.0019
TYR 1970.0014
PRO 1980.0015
ASP 1990.0014
SER 2000.0012
LEU 2010.0015
VAL 2020.0017
GLY 2030.0019
THR 2040.0025
ASP 2050.0032
SER 2060.0019
HIS 2070.0023
THR 2080.0020
THR 2090.0024
MET 2100.0027
ILE 2110.0025
ASP 2120.0027
GLY 2130.0033
LEU 2140.0035
GLY 2150.0033
VAL 2160.0023
LEU 2170.0023
GLY 2180.0020
TRP 2190.0022
GLY 2200.0018
VAL 2210.0035
GLY 2220.0037
GLY 2230.0028
ILE 2240.0021
GLU 2250.0022
ALA 2260.0011
GLU 2270.0014
ALA 2280.0021
VAL 2290.0024
MET 2300.0030
LEU 2310.0040
GLY 2320.0046
GLN 2330.0043
PRO 2340.0044
ILE 2350.0040
SER 2360.0053
MET 2370.0051
VAL 2380.0055
LEU 2390.0046
PRO 2400.0049
GLN 2410.0052
VAL 2420.0048
ILE 2430.0056
GLY 2440.0056
TYR 2450.0061
ARG 2460.0068
LEU 2470.0074
MET 2480.0091
GLY 2490.0106
LYS 2500.0106
PRO 2510.0100
HIS 2520.0105
PRO 2530.0092
LEU 2540.0071
VAL 2550.0067
THR 2560.0047
SER 2570.0040
THR 2580.0034
ASP 2590.0052
ILE 2600.0056
VAL 2610.0044
LEU 2620.0051
THR 2630.0060
ILE 2640.0053
THR 2650.0048
LYS 2660.0060
HIS 2670.0065
LEU 2680.0057
ARG 2690.0061
GLN 2700.0072
VAL 2710.0069
GLY 2720.0066
VAL 2730.0055
VAL 2740.0056
GLY 2750.0050
LYS 2760.0049
PHE 2770.0041
VAL 2780.0044
GLU 2790.0043
PHE 2800.0049
PHE 2810.0059
GLY 2820.0074
PRO 2830.0081
GLY 2840.0076
VAL 2850.0062
ALA 2860.0075
GLN 2870.0072
LEU 2880.0057
SER 2890.0054
ILE 2900.0045
ALA 2910.0039
ASP 2920.0038
ARG 2930.0036
ALA 2940.0028
THR 2950.0024
ILE 2960.0029
ALA 2970.0025
ASN 2980.0020
MET 2990.0022
CYS 3000.0025
PRO 3010.0037
GLU 3020.0043
TYR 3030.0047
GLY 3040.0045
ALA 3050.0038
THR 3060.0032
ALA 3070.0029
THR 3080.0033
PHE 3090.0032
PHE 3100.0037
PRO 3110.0041
VAL 3120.0043
ASP 3130.0053
GLU 3140.0061
VAL 3150.0058
SER 3160.0050
ILE 3170.0056
LYS 3180.0061
TYR 3190.0054
LEU 3200.0054
VAL 3210.0061
GLN 3220.0063
THR 3230.0056
GLY 3240.0059
ARG 3250.0053
ASP 3260.0060
GLU 3270.0063
SER 3280.0062
LYS 3290.0052
VAL 3300.0050
LYS 3310.0055
GLN 3320.0049
ILE 3330.0041
ARG 3340.0046
LYS 3350.0047
TYR 3360.0035
LEU 3370.0035
GLN 3380.0043
ALA 3390.0037
VAL 3400.0030
GLY 3410.0041
MET 3420.0036
PHE 3430.0045
ARG 3440.0050
ASP 3450.0063
TYR 3460.0067
SER 3470.0080
ASP 3480.0077
PRO 3490.0078
SER 3500.0075
GLN 3510.0061
ASP 3520.0061
PRO 3530.0054
ASP 3540.0060
PHE 3550.0059
THR 3560.0059
GLN 3570.0068
VAL 3580.0071
VAL 3590.0077
GLU 3600.0082
LEU 3610.0088
ASP 3620.0103
LEU 3630.0093
LYS 3640.0114
THR 3650.0116
VAL 3660.0110
VAL 3670.0111
PRO 3680.0082
CYS 3690.0094
CYS 3700.0097
SER 3710.0143
GLY 3720.0171
PRO 3730.0184
LYS 3740.0217
ARG 3750.0215
PRO 3760.0182
GLN 3770.0202
ASP 3780.0201
LYS 3790.0170
VAL 3800.0158
ALA 3810.0140
VAL 3820.0105
SER 3830.0132
ASP 3840.0156
MET 3850.0131
LYS 3860.0137
LYS 3870.0180
ASP 3880.0190
PHE 3890.0173
GLU 3900.0186
SER 3910.0229
CYS 3920.0230
LEU 3930.0227
GLY 3940.0264
ALA 3950.0289
LYS 3960.0325
GLN 3970.0316
GLY 3980.0307
PHE 3990.0274
LYS 4000.0250
GLY 4010.0264
PHE 4020.0265
GLN 4030.0286
VAL 4040.0269
ALA 4050.0283
PRO 4060.0264
ASP 4070.0241
HIS 4080.0223
HIS 4090.0201
ASN 4100.0163
ASP 4110.0171
HIS 4120.0149
LYS 4130.0159
THR 4140.0146
PHE 4150.0172
ILE 4160.0187
TYR 4170.0194
ASN 4180.0218
ASP 4190.0212
SER 4200.0167
GLU 4210.0136
PHE 4220.0113
THR 4230.0105
LEU 4240.0125
SER 4250.0125
HIS 4260.0149
GLY 4270.0131
SER 4280.0109
VAL 4290.0105
VAL 4300.0138
ILE 4310.0135
ALA 4320.0103
ALA 4330.0114
ILE 4340.0091
THR 4350.0103
SER 4360.0084
SER 4370.0060
THR 4380.0064
ASN 4390.0031
THR 4400.0019
SER 4410.0013
ASN 4420.0023
PRO 4430.0044
SER 4440.0044
VAL 4450.0029
MET 4460.0046
LEU 4470.0065
GLY 4480.0054
ALA 4490.0050
GLY 4500.0077
LEU 4510.0090
LEU 4520.0072
ALA 4530.0087
LYS 4540.0118
LYS 4550.0114
ALA 4560.0099
VAL 4570.0128
ASP 4580.0152
ALA 4590.0137
GLY 4600.0137
LEU 4610.0101
ASN 4620.0100
VAL 4630.0091
LYS 4640.0104
PRO 4650.0146
TYR 4660.0158
VAL 4670.0131
LYS 4680.0154
THR 4690.0129
SER 4700.0139
LEU 4710.0119
SER 4720.0121
PRO 4730.0089
GLY 4740.0102
SER 4750.0097
GLY 4760.0072
VAL 4770.0063
VAL 4780.0067
THR 4790.0085
TYR 4800.0084
TYR 4810.0077
LEU 4820.0093
ARG 4830.0112
GLU 4840.0110
SER 4850.0109
GLY 4860.0151
VAL 4870.0126
MET 4880.0137
PRO 4890.0163
TYR 4900.0138
LEU 4910.0117
SER 4920.0148
GLN 4930.0148
LEU 4940.0114
GLY 4950.0130
PHE 4960.0125
ASP 4970.0153
VAL 4980.0157
VAL 4990.0173
PRO 5120.0247
LEU 5130.0219
PRO 5140.0227
GLU 5150.0256
PRO 5160.0225
VAL 5170.0199
VAL 5180.0233
GLU 5190.0242
ALA 5200.0203
ILE 5210.0209
THR 5220.0251
GLN 5230.0245
GLY 5240.0215
ASP 5250.0242
LEU 5260.0206
VAL 5270.0197
ALA 5280.0168
VAL 5290.0144
GLY 5300.0140
VAL 5310.0104
LEU 5320.0106
SER 5330.0076
GLY 5340.0085
ASN 5350.0110
ARG 5360.0134
ASN 5370.0182
PHE 5380.0183
GLU 5390.0222
GLY 5400.0225
ARG 5410.0207
VAL 5420.0216
HIS 5430.0229
PRO 5440.0260
ASN 5450.0232
THR 5460.0202
ARG 5470.0219
ALA 5480.0184
ASN 5490.0161
TYR 5500.0130
LEU 5510.0109
ALA 5520.0065
SER 5530.0033
PRO 5540.0032
PRO 5550.0020
LEU 5560.0016
VAL 5570.0044
ILE 5580.0043
ALA 5590.0013
TYR 5600.0031
ALA 5610.0051
ILE 5620.0041
ALA 5630.0014
GLY 5640.0052
THR 5650.0066
ILE 5660.0086
ARG 5670.0103
ILE 5680.0082
ASP 5690.0105
PHE 5700.0089
GLU 5710.0130
LYS 5720.0132
GLU 5730.0092
PRO 5740.0076
LEU 5750.0046
GLY 5760.0057
THR 5770.0089
ASN 5780.0125
ALA 5790.0138
LYS 5800.0167
GLY 5810.0164
GLN 5820.0148
GLN 5830.0115
VAL 5840.0106
PHE 5850.0096
LEU 5860.0074
ARG 5870.0104
ASP 5880.0117
ILE 5890.0095
TRP 5900.0077
PRO 5910.0091
THR 5920.0085
ARG 5930.0074
GLU 5940.0097
GLU 5950.0100
ILE 5960.0079
GLN 5970.0077
ALA 5980.0098
VAL 5990.0097
GLU 6000.0080
ARG 6010.0090
GLN 6020.0105
TYR 6030.0104
VAL 6040.0085
ILE 6050.0070
PRO 6060.0085
GLY 6070.0084
MET 6080.0073
PHE 6090.0061
THR 6100.0069
GLU 6110.0072
VAL 6120.0056
TYR 6130.0042
GLN 6140.0049
LYS 6150.0060
ILE 6160.0050
GLU 6170.0035
THR 6180.0059
VAL 6190.0079
ASN 6200.0072
ALA 6210.0079
SER 6220.0124
TRP 6230.0134
LYS 6320.0154
LEU 6330.0155
TYR 6340.0151
LEU 6350.0176
TRP 6360.0166
ASN 6370.0194
PRO 6380.0202
LYS 6390.0217
SER 6400.0193
THR 6410.0182
TYR 6420.0157
ILE 6430.0141
LYS 6440.0138
SER 6450.0126
PRO 6460.0100
PRO 6470.0095
PHE 6480.0075
PHE 6490.0097
GLU 6500.0113
ASN 6510.0127
LEU 6520.0118
THR 6530.0144
LEU 6540.0158
ASP 6550.0164
LEU 6560.0143
GLN 6570.0150
PRO 6580.0151
PRO 6590.0127
LYS 6600.0115
SER 6610.0109
ILE 6620.0083
VAL 6630.0084
ASP 6640.0063
ALA 6650.0038
TYR 6660.0028
VAL 6670.0056
LEU 6680.0060
LEU 6690.0093
ASN 6700.0117
LEU 6710.0139
GLY 6720.0168
ASP 6730.0182
SER 6740.0178
VAL 6750.0150
THR 6760.0148
THR 6770.0120
ASP 6780.0143
HIS 6790.0141
ILE 6800.0106
SER 6810.0111
PRO 6820.0146
ALA 6830.0160
GLY 6840.0190
ASN 6850.0206
ILE 6860.0201
ALA 6870.0227
ARG 6880.0249
ASN 6890.0233
SER 6900.0198
PRO 6910.0175
ALA 6920.0178
ALA 6930.0214
ARG 6940.0220
TYR 6950.0201
LEU 6960.0220
THR 6970.0253
ASN 6980.0250
ARG 6990.0251
GLY 7000.0280
LEU 7010.0266
THR 7020.0287
PRO 7030.0274
ARG 7040.0285
GLU 7050.0257
PHE 7060.0226
ASN 7070.0207
SER 7080.0182
TYR 7090.0152
GLY 7100.0137
SER 7110.0150
ARG 7120.0140
ARG 7130.0106
GLY 7140.0110
ASN 7150.0125
ASP 7160.0105
ALA 7170.0132
ILE 7180.0142
MET 7190.0112
ALA 7200.0099
ARG 7210.0129
GLY 7220.0133
THR 7230.0102
PHE 7240.0116
ALA 7250.0148
ASN 7260.0168
ILE 7270.0202
ARG 7280.0206
LEU 7290.0174
LEU 7300.0181
ASN 7310.0152
ARG 7320.0163
PHE 7330.0142
LEU 7340.0172
ASN 7350.0200
LYS 7360.0215
GLN 7370.0211
ALA 7380.0192
PRO 7390.0166
GLN 7400.0146
THR 7410.0121
ILE 7420.0109
HIS 7430.0085
LEU 7440.0066
PRO 7450.0055
SER 7460.0091
GLY 7470.0104
GLU 7480.0130
THR 7490.0144
LEU 7500.0146
ASP 7510.0149
VAL 7520.0114
PHE 7530.0111
ASP 7540.0125
ALA 7550.0098
ALA 7560.0074
GLU 7570.0099
ARG 7580.0097
TYR 7590.0061
GLN 7600.0074
GLN 7610.0105
GLU 7620.0084
GLY 7630.0078
HIS 7640.0041
PRO 7650.0033
LEU 7660.0011
ILE 7670.0043
VAL 7680.0071
LEU 7690.0105
ALA 7700.0130
GLY 7710.0165
LYS 7720.0176
GLU 7730.0164
TYR 7740.0132
GLY 7750.0116
SER 7760.0143
GLY 7770.0150
SER 7780.0137
SER 7790.0101
ARG 7800.0091
ASP 7810.0065
TRP 7820.0064
ALA 7830.0064
ALA 7840.0033
LYS 7850.0033
GLY 7860.0056
PRO 7870.0041
PHE 7880.0023
LEU 7890.0055
LEU 7900.0054
GLY 7910.0033
ILE 7920.0010
LYS 7930.0031
ALA 7940.0054
VAL 7950.0076
LEU 7960.0109
ALA 7970.0135
GLU 7980.0169
SER 7990.0162
TYR 8000.0134
GLU 8010.0133
ARG 8020.0109
ILE 8030.0082
HIS 8040.0076
ARG 8050.0084
SER 8060.0067
ASN 8070.0043
LEU 8080.0043
VAL 8090.0058
GLY 8100.0039
MET 8110.0024
GLY 8120.0049
VAL 8130.0042
ILE 8140.0074
PRO 8150.0091
LEU 8160.0116
GLU 8170.0146
TYR 8180.0171
LEU 8190.0204
PRO 8200.0229
GLY 8210.0242
GLU 8220.0215
ASN 8230.0188
ALA 8240.0169
ASP 8250.0199
SER 8260.0218
LEU 8270.0192
GLY 8280.0180
LEU 8290.0146
THR 8300.0133
GLY 8310.0103
ARG 8320.0083
GLU 8330.0080
ARG 8340.0060
TYR 8350.0079
THR 8360.0098
ILE 8370.0115
ILE 8380.0138
ILE 8390.0139
PRO 8400.0170
GLU 8410.0174
ASN 8420.0192
LEU 8430.0170
THR 8440.0181
PRO 8450.0167
ARG 8460.0168
MET 8470.0183
HIS 8480.0187
VAL 8490.0169
GLN 8500.0168
VAL 8510.0140
LYS 8520.0138
LEU 8530.0115
ASP 8540.0098
THR 8550.0119
GLY 8560.0149
LYS 8570.0161
THR 8580.0172
PHE 8590.0181
GLN 8600.0185
ALA 8610.0165
VAL 8620.0162
ILE 8630.0136
ARG 8640.0128
PHE 8650.0120
ASP 8660.0137
THR 8670.0130
ASP 8680.0135
VAL 8690.0108
GLU 8700.0098
LEU 8710.0119
THR 8720.0114
TYR 8730.0084
PHE 8740.0089
HIS 8750.0113
ASN 8760.0101
GLY 8770.0073
GLY 8780.0056
ILE 8790.0055
LEU 8800.0059
ASN 8810.0082
TYR 8820.0090
MET 8830.0088
ILE 8840.0105
ARG 8850.0125
LYS 8860.0127
MET 8870.0134
ALA 8880.0155
LYS 8890.0180

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.