CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  LYASE/RNA 29-JUN-11 3SNP  ***

<R2> analysis for 22100319494474332

---  normal mode 10  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0382
SER 20.0101
ASN 30.0083
PRO 40.0079
PHE 50.0061
ALA 60.0065
TYR 70.0061
LEU 80.0045
ALA 90.0056
GLU 100.0063
PRO 110.0075
LEU 120.0068
ASP 130.0090
PRO 140.0106
ALA 150.0122
GLN 160.0109
PRO 170.0106
GLY 180.0102
LYS 190.0081
LYS 200.0067
PHE 210.0046
PHE 220.0038
ASN 230.0030
LEU 240.0025
ASN 250.0026
LYS 260.0025
LEU 270.0031
ASP 280.0033
TYR 290.0034
SER 300.0047
ARG 310.0055
TYR 320.0043
GLY 330.0050
ARG 340.0065
LEU 350.0062
PRO 360.0069
PHE 370.0056
SER 380.0061
ILE 390.0061
ARG 400.0043
VAL 410.0041
LEU 420.0057
LEU 430.0052
GLU 440.0041
ALA 450.0052
ALA 460.0064
VAL 470.0057
ARG 480.0056
ASN 490.0071
CYS 500.0078
ASP 510.0093
LYS 520.0103
PHE 530.0109
LEU 540.0102
VAL 550.0094
LYS 560.0100
LYS 570.0087
GLU 580.0096
ASP 590.0090
ILE 600.0074
GLU 610.0079
ASN 620.0086
ILE 630.0073
LEU 640.0061
ASN 650.0076
TRP 660.0082
ASN 670.0087
VAL 680.0098
THR 690.0102
GLN 700.0106
HIS 710.0124
MET 720.0131
ASN 730.0132
ILE 740.0122
GLU 750.0119
VAL 760.0099
PRO 770.0094
PHE 780.0082
LYS 790.0076
PRO 800.0066
ALA 810.0056
ARG 820.0062
VAL 830.0069
ILE 840.0065
LEU 850.0075
GLN 860.0072
ASP 870.0067
PHE 880.0072
THR 890.0078
GLY 900.0078
VAL 910.0082
PRO 920.0070
SER 930.0076
VAL 940.0075
VAL 950.0067
ASP 960.0071
PHE 970.0071
ALA 980.0065
ALA 990.0062
MET 1000.0070
ARG 1010.0071
ASP 1020.0064
ALA 1030.0068
VAL 1040.0076
LYS 1050.0074
LYS 1060.0073
LEU 1070.0081
GLY 1080.0086
GLY 1090.0087
ASP 1100.0085
PRO 1110.0076
GLU 1120.0079
LYS 1130.0085
ILE 1140.0078
ASN 1150.0082
PRO 1160.0086
ILE 1170.0088
CYS 1180.0077
PRO 1190.0068
VAL 1200.0070
ASP 1210.0062
LEU 1220.0066
VAL 1230.0060
ILE 1240.0065
ASP 1250.0057
HIS 1260.0068
SER 1270.0077
GLU 1460.0100
PHE 1470.0098
GLU 1480.0078
ARG 1490.0077
ASN 1500.0081
ARG 1510.0074
GLU 1520.0066
ARG 1530.0068
PHE 1540.0075
GLU 1550.0071
PHE 1560.0068
LEU 1570.0070
LYS 1580.0071
TRP 1590.0069
GLY 1600.0070
SER 1610.0070
LYS 1620.0068
ALA 1630.0070
PHE 1640.0073
ARG 1650.0077
ASN 1660.0065
MET 1670.0069
ARG 1680.0059
ILE 1690.0059
ILE 1700.0053
PRO 1710.0056
PRO 1720.0059
GLY 1730.0047
SER 1740.0039
GLY 1750.0044
ILE 1760.0063
ILE 1770.0071
HIS 1780.0072
GLN 1790.0077
VAL 1800.0064
ASN 1810.0048
LEU 1820.0053
GLU 1830.0049
TYR 1840.0038
LEU 1850.0037
ALA 1860.0033
ARG 1870.0026
VAL 1880.0030
VAL 1890.0027
PHE 1900.0036
ASP 1910.0049
GLN 1920.0062
ASP 1930.0082
GLY 1940.0080
TYR 1950.0060
TYR 1960.0044
TYR 1970.0033
PRO 1980.0028
ASP 1990.0032
SER 2000.0046
LEU 2010.0055
VAL 2020.0071
GLY 2030.0073
THR 2040.0086
ASP 2050.0075
SER 2060.0092
HIS 2070.0079
THR 2080.0064
THR 2090.0072
MET 2100.0070
ILE 2110.0059
ASP 2120.0063
GLY 2130.0071
LEU 2140.0058
GLY 2150.0052
VAL 2160.0040
LEU 2170.0051
GLY 2180.0060
TRP 2190.0074
GLY 2200.0083
VAL 2210.0096
GLY 2220.0097
GLY 2230.0095
ILE 2240.0100
GLU 2250.0100
ALA 2260.0091
GLU 2270.0091
ALA 2280.0096
VAL 2290.0095
MET 2300.0091
LEU 2310.0093
GLY 2320.0094
GLN 2330.0100
PRO 2340.0098
ILE 2350.0098
SER 2360.0115
MET 2370.0109
VAL 2380.0114
LEU 2390.0095
PRO 2400.0099
GLN 2410.0103
VAL 2420.0095
ILE 2430.0109
GLY 2440.0104
TYR 2450.0116
ARG 2460.0123
LEU 2470.0126
MET 2480.0133
GLY 2490.0140
LYS 2500.0139
PRO 2510.0131
HIS 2520.0106
PRO 2530.0094
LEU 2540.0083
VAL 2550.0107
THR 2560.0132
SER 2570.0132
THR 2580.0133
ASP 2590.0132
ILE 2600.0130
VAL 2610.0123
LEU 2620.0136
THR 2630.0145
ILE 2640.0128
THR 2650.0123
LYS 2660.0152
HIS 2670.0153
LEU 2680.0136
ARG 2690.0147
GLN 2700.0164
VAL 2710.0154
GLY 2720.0151
VAL 2730.0132
VAL 2740.0135
GLY 2750.0123
LYS 2760.0114
PHE 2770.0096
VAL 2780.0100
GLU 2790.0088
PHE 2800.0096
PHE 2810.0101
GLY 2820.0114
PRO 2830.0120
GLY 2840.0125
VAL 2850.0110
ALA 2860.0110
GLN 2870.0119
LEU 2880.0112
SER 2890.0104
ILE 2900.0092
ALA 2910.0099
ASP 2920.0109
ARG 2930.0097
ALA 2940.0090
THR 2950.0104
ILE 2960.0105
ALA 2970.0088
ASN 2980.0090
MET 2990.0110
CYS 3000.0108
PRO 3010.0113
GLU 3020.0129
TYR 3030.0132
GLY 3040.0126
ALA 3050.0110
THR 3060.0102
ALA 3070.0089
THR 3080.0090
PHE 3090.0074
PHE 3100.0075
PRO 3110.0066
VAL 3120.0060
ASP 3130.0075
GLU 3140.0085
VAL 3150.0088
SER 3160.0071
ILE 3170.0068
LYS 3180.0081
TYR 3190.0074
LEU 3200.0059
VAL 3210.0070
GLN 3220.0077
THR 3230.0058
GLY 3240.0055
ARG 3250.0050
ASP 3260.0072
GLU 3270.0087
SER 3280.0089
LYS 3290.0068
VAL 3300.0062
LYS 3310.0077
GLN 3320.0068
ILE 3330.0050
ARG 3340.0060
LYS 3350.0066
TYR 3360.0048
LEU 3370.0042
GLN 3380.0056
ALA 3390.0049
VAL 3400.0033
GLY 3410.0041
MET 3420.0042
PHE 3430.0055
ARG 3440.0071
ASP 3450.0089
TYR 3460.0099
SER 3470.0115
ASP 3480.0106
PRO 3490.0108
SER 3500.0097
GLN 3510.0080
ASP 3520.0087
PRO 3530.0079
ASP 3540.0089
PHE 3550.0099
THR 3560.0103
GLN 3570.0118
VAL 3580.0122
VAL 3590.0136
GLU 3600.0142
LEU 3610.0137
ASP 3620.0139
LEU 3630.0137
LYS 3640.0140
THR 3650.0140
VAL 3660.0131
VAL 3670.0095
PRO 3680.0098
CYS 3690.0123
CYS 3700.0149
SER 3710.0199
GLY 3720.0204
PRO 3730.0197
LYS 3740.0245
ARG 3750.0280
PRO 3760.0270
GLN 3770.0306
ASP 3780.0273
LYS 3790.0230
VAL 3800.0186
ALA 3810.0141
VAL 3820.0087
SER 3830.0092
ASP 3840.0144
MET 3850.0124
LYS 3860.0155
LYS 3870.0206
ASP 3880.0211
PHE 3890.0189
GLU 3900.0223
SER 3910.0281
CYS 3920.0268
LEU 3930.0267
GLY 3940.0329
ALA 3950.0352
LYS 3960.0382
GLN 3970.0355
GLY 3980.0358
PHE 3990.0324
LYS 4000.0293
GLY 4010.0301
PHE 4020.0281
GLN 4030.0325
VAL 4040.0311
ALA 4050.0360
PRO 4060.0373
ASP 4070.0368
HIS 4080.0306
HIS 4090.0282
ASN 4100.0275
ASP 4110.0247
HIS 4120.0204
LYS 4130.0183
THR 4140.0185
PHE 4150.0166
ILE 4160.0199
TYR 4170.0190
ASN 4180.0246
ASP 4190.0284
SER 4200.0258
GLU 4210.0230
PHE 4220.0187
THR 4230.0179
LEU 4240.0134
SER 4250.0166
HIS 4260.0160
GLY 4270.0125
SER 4280.0084
VAL 4290.0042
VAL 4300.0045
ILE 4310.0083
ALA 4320.0093
ALA 4330.0130
ILE 4340.0150
THR 4350.0185
SER 4360.0193
SER 4370.0172
THR 4380.0180
ASN 4390.0149
THR 4400.0151
SER 4410.0136
ASN 4420.0142
PRO 4430.0146
SER 4440.0137
VAL 4450.0135
MET 4460.0145
LEU 4470.0147
GLY 4480.0124
ALA 4490.0126
GLY 4500.0144
LEU 4510.0139
LEU 4520.0113
ALA 4530.0130
LYS 4540.0152
LYS 4550.0132
ALA 4560.0124
VAL 4570.0157
ASP 4580.0174
ALA 4590.0157
GLY 4600.0167
LEU 4610.0142
ASN 4620.0140
VAL 4630.0119
LYS 4640.0129
PRO 4650.0150
TYR 4660.0120
VAL 4670.0095
LYS 4680.0115
THR 4690.0132
SER 4700.0172
LEU 4710.0181
SER 4720.0197
PRO 4730.0185
GLY 4740.0210
SER 4750.0222
GLY 4760.0159
VAL 4770.0144
VAL 4780.0155
THR 4790.0162
TYR 4800.0147
TYR 4810.0148
LEU 4820.0161
ARG 4830.0167
GLU 4840.0154
SER 4850.0151
GLY 4860.0192
VAL 4870.0170
MET 4880.0183
PRO 4890.0192
TYR 4900.0166
LEU 4910.0164
SER 4920.0189
GLN 4930.0186
LEU 4940.0152
GLY 4950.0160
PHE 4960.0166
ASP 4970.0201
VAL 4980.0218
VAL 4990.0226
PRO 5120.0148
LEU 5130.0103
PRO 5140.0114
GLU 5150.0100
PRO 5160.0105
VAL 5170.0070
VAL 5180.0043
GLU 5190.0060
ALA 5200.0096
ILE 5210.0083
THR 5220.0102
GLN 5230.0128
GLY 5240.0163
ASP 5250.0167
LEU 5260.0151
VAL 5270.0148
ALA 5280.0093
VAL 5290.0083
GLY 5300.0090
VAL 5310.0095
LEU 5320.0131
SER 5330.0136
GLY 5340.0172
ASN 5350.0196
ARG 5360.0229
ASN 5370.0264
PHE 5380.0230
GLU 5390.0232
GLY 5400.0234
ARG 5410.0188
VAL 5420.0177
HIS 5430.0143
PRO 5440.0147
ASN 5450.0099
THR 5460.0109
ARG 5470.0157
ALA 5480.0147
ASN 5490.0142
TYR 5500.0140
LEU 5510.0159
ALA 5520.0112
SER 5530.0118
PRO 5540.0126
PRO 5550.0101
LEU 5560.0073
VAL 5570.0083
ILE 5580.0089
ALA 5590.0058
TYR 5600.0040
ALA 5610.0062
ILE 5620.0083
ALA 5630.0072
GLY 5640.0060
THR 5650.0067
ILE 5660.0082
ARG 5670.0130
ILE 5680.0111
ASP 5690.0112
PHE 5700.0071
GLU 5710.0090
LYS 5720.0134
GLU 5730.0124
PRO 5740.0121
LEU 5750.0092
GLY 5760.0125
THR 5770.0158
ASN 5780.0181
ALA 5790.0195
LYS 5800.0231
GLY 5810.0235
GLN 5820.0212
GLN 5830.0167
VAL 5840.0133
PHE 5850.0096
LEU 5860.0060
ARG 5870.0059
ASP 5880.0098
ILE 5890.0104
TRP 5900.0086
PRO 5910.0117
THR 5920.0119
ARG 5930.0123
GLU 5940.0125
GLU 5950.0126
ILE 5960.0129
GLN 5970.0120
ALA 5980.0121
VAL 5990.0128
GLU 6000.0119
ARG 6010.0107
GLN 6020.0111
TYR 6030.0119
VAL 6040.0116
ILE 6050.0098
PRO 6060.0091
GLY 6070.0093
MET 6080.0086
PHE 6090.0061
THR 6100.0059
GLU 6110.0061
VAL 6120.0041
TYR 6130.0033
GLN 6140.0033
LYS 6150.0033
ILE 6160.0037
GLU 6170.0040
THR 6180.0043
VAL 6190.0046
ASN 6200.0056
ALA 6210.0063
SER 6220.0073
TRP 6230.0080
LYS 6320.0066
LEU 6330.0061
TYR 6340.0056
LEU 6350.0051
TRP 6360.0049
ASN 6370.0033
PRO 6380.0022
LYS 6390.0024
SER 6400.0035
THR 6410.0043
TYR 6420.0053
ILE 6430.0050
LYS 6440.0041
SER 6450.0042
PRO 6460.0041
PRO 6470.0041
PHE 6480.0049
PHE 6490.0059
GLU 6500.0058
ASN 6510.0071
LEU 6520.0075
THR 6530.0085
LEU 6540.0091
ASP 6550.0099
LEU 6560.0096
GLN 6570.0098
PRO 6580.0093
PRO 6590.0072
LYS 6600.0068
SER 6610.0059
ILE 6620.0054
VAL 6630.0075
ASP 6640.0090
ALA 6650.0079
TYR 6660.0096
VAL 6670.0095
LEU 6680.0098
LEU 6690.0111
ASN 6700.0125
LEU 6710.0134
GLY 6720.0148
ASP 6730.0157
SER 6740.0159
VAL 6750.0136
THR 6760.0138
THR 6770.0120
ASP 6780.0129
HIS 6790.0125
ILE 6800.0097
SER 6810.0093
PRO 6820.0116
ALA 6830.0124
GLY 6840.0134
ASN 6850.0128
ILE 6860.0115
ALA 6870.0138
ARG 6880.0139
ASN 6890.0144
SER 6900.0120
PRO 6910.0099
ALA 6920.0086
ALA 6930.0102
ARG 6940.0101
TYR 6950.0076
LEU 6960.0074
THR 6970.0090
ASN 6980.0082
ARG 6990.0063
GLY 7000.0072
LEU 7010.0079
THR 7020.0099
PRO 7030.0114
ARG 7040.0117
GLU 7050.0094
PHE 7060.0090
ASN 7070.0093
SER 7080.0100
TYR 7090.0086
GLY 7100.0096
SER 7110.0086
ARG 7120.0061
ARG 7130.0060
GLY 7140.0054
ASN 7150.0044
ASP 7160.0039
ALA 7170.0034
ILE 7180.0053
MET 7190.0058
ALA 7200.0048
ARG 7210.0066
GLY 7220.0083
THR 7230.0078
PHE 7240.0101
ALA 7250.0115
ASN 7260.0138
ILE 7270.0166
ARG 7280.0180
LEU 7290.0159
LEU 7300.0173
ASN 7310.0158
ARG 7320.0170
PHE 7330.0170
LEU 7340.0193
ASN 7350.0207
LYS 7360.0213
GLN 7370.0196
ALA 7380.0177
PRO 7390.0148
GLN 7400.0147
THR 7410.0145
ILE 7420.0159
HIS 7430.0149
LEU 7440.0157
PRO 7450.0168
SER 7460.0188
GLY 7470.0194
GLU 7480.0190
THR 7490.0178
LEU 7500.0155
ASP 7510.0134
VAL 7520.0111
PHE 7530.0088
ASP 7540.0109
ALA 7550.0116
ALA 7560.0087
GLU 7570.0093
ARG 7580.0122
TYR 7590.0107
GLN 7600.0092
GLN 7610.0121
GLU 7620.0135
GLY 7630.0115
HIS 7640.0100
PRO 7650.0071
LEU 7660.0064
ILE 7670.0061
VAL 7680.0078
LEU 7690.0094
ALA 7700.0111
GLY 7710.0132
LYS 7720.0141
GLU 7730.0142
TYR 7740.0118
GLY 7750.0115
SER 7760.0142
GLY 7770.0143
SER 7780.0145
SER 7790.0124
ARG 7800.0097
ASP 7810.0080
TRP 7820.0071
ALA 7830.0077
ALA 7840.0063
LYS 7850.0051
GLY 7860.0048
PRO 7870.0050
PHE 7880.0035
LEU 7890.0032
LEU 7900.0045
GLY 7910.0039
ILE 7920.0041
LYS 7930.0032
ALA 7940.0039
VAL 7950.0061
LEU 7960.0073
ALA 7970.0092
GLU 7980.0113
SER 7990.0120
TYR 8000.0114
GLU 8010.0129
ARG 8020.0110
ILE 8030.0108
HIS 8040.0097
ARG 8050.0092
SER 8060.0096
ASN 8070.0085
LEU 8080.0071
VAL 8090.0077
GLY 8100.0080
MET 8110.0063
GLY 8120.0059
VAL 8130.0048
ILE 8140.0050
PRO 8150.0066
LEU 8160.0063
GLU 8170.0085
TYR 8180.0092
LEU 8190.0100
PRO 8200.0128
GLY 8210.0139
GLU 8220.0121
ASN 8230.0122
ALA 8240.0126
ASP 8250.0151
SER 8260.0141
LEU 8270.0119
GLY 8280.0140
LEU 8290.0125
THR 8300.0145
GLY 8310.0127
ARG 8320.0139
GLU 8330.0122
ARG 8340.0104
TYR 8350.0076
THR 8360.0062
ILE 8370.0042
ILE 8380.0051
ILE 8390.0056
PRO 8400.0076
GLU 8410.0095
ASN 8420.0103
LEU 8430.0090
THR 8440.0103
PRO 8450.0107
ARG 8460.0096
MET 8470.0084
HIS 8480.0065
VAL 8490.0044
GLN 8500.0036
VAL 8510.0046
LYS 8520.0064
LEU 8530.0089
ASP 8540.0113
THR 8550.0125
GLY 8560.0105
LYS 8570.0092
THR 8580.0066
PHE 8590.0060
GLN 8600.0055
ALA 8610.0064
VAL 8620.0072
ILE 8630.0067
ARG 8640.0085
PHE 8650.0091
ASP 8660.0113
THR 8670.0116
ASP 8680.0117
VAL 8690.0116
GLU 8700.0102
LEU 8710.0097
THR 8720.0097
TYR 8730.0086
PHE 8740.0073
HIS 8750.0079
ASN 8760.0079
GLY 8770.0068
GLY 8780.0071
ILE 8790.0082
LEU 8800.0076
ASN 8810.0075
TYR 8820.0085
MET 8830.0088
ILE 8840.0082
ARG 8850.0091
LYS 8860.0101
MET 8870.0096
ALA 8880.0094
LYS 8890.0106

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.