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***  protein spike  ***

<R2> analysis for 2107121123546436

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0522
THR 3200.0327
ASN 3210.0294
LEU 3220.0264
CYS 3230.0213
PRO 3240.0188
PHE 3250.0159
GLY 3260.0170
GLU 3270.0160
VAL 3280.0104
PHE 3290.0096
ASN 3300.0113
ALA 3310.0112
THR 3320.0110
LYS 3330.0097
PHE 3340.0070
PRO 3350.0066
SER 3360.0083
VAL 3370.0063
TYR 3380.0108
ALA 3390.0105
TRP 3400.0057
GLU 3410.0058
ARG 3420.0046
LYS 3430.0085
LYS 3440.0099
ILE 3450.0142
SER 3460.0174
ASN 3470.0222
CYS 3480.0240
VAL 3490.0265
ALA 3500.0235
ASP 3510.0256
TYR 3520.0221
SER 3530.0246
VAL 3540.0220
LEU 3550.0178
TYR 3560.0204
ASN 3570.0234
SER 3580.0190
THR 3590.0162
PHE 3600.0109
PHE 3610.0089
SER 3620.0076
THR 3630.0090
PHE 3640.0138
LYS 3650.0160
CYS 3660.0180
TYR 3670.0196
GLY 3680.0230
VAL 3690.0237
SER 3700.0255
ALA 3710.0228
THR 3720.0270
LYS 3730.0288
LEU 3740.0250
ASN 3750.0281
ASP 3760.0310
LEU 3770.0275
CYS 3780.0254
PHE 3790.0207
SER 3800.0180
ASN 3810.0146
VAL 3820.0130
TYR 3830.0082
ALA 3840.0068
ASP 3850.0028
SER 3860.0033
PHE 3870.0027
VAL 3880.0024
VAL 3890.0037
LYS 3900.0040
GLY 3910.0046
ASP 3920.0091
ASP 3930.0093
VAL 3940.0083
ARG 3950.0126
GLN 3960.0142
ILE 3970.0111
ALA 3980.0149
PRO 3990.0175
GLY 4000.0214
GLN 4010.0202
THR 4020.0214
GLY 4030.0204
VAL 4040.0184
ILE 4050.0136
ALA 4060.0150
ASP 4070.0188
TYR 4080.0176
ASN 4090.0126
TYR 4100.0095
LYS 4110.0124
LEU 4120.0125
PRO 4130.0154
ASP 4140.0200
ASP 4150.0197
PHE 4160.0161
MET 4170.0170
GLY 4180.0148
CYS 4190.0139
VAL 4200.0098
LEU 4210.0083
ALA 4220.0052
TRP 4230.0046
ASN 4240.0044
THR 4250.0055
ARG 4260.0057
ARG 4260.0057
ASN 4270.0082
ILE 4280.0083
ILE 4280.0083
ASP 4290.0069
ALA 4300.0067
THR 4310.0083
SER 4320.0082
THR 4330.0093
GLY 4340.0080
ASN 4350.0083
HIS 4360.0101
ASN 4370.0111
TYR 4380.0086
LYS 4390.0103
TYR 4400.0121
ARG 4410.0174
TYR 4420.0213
LEU 4430.0266
ARG 4440.0269
HIS 4450.0300
GLY 4460.0274
LYS 4470.0230
LEU 4480.0174
ARG 4490.0160
PRO 4500.0128
PHE 4510.0078
GLU 4520.0105
ARG 4530.0108
ASP 4540.0159
ILE 4550.0175
SER 4560.0241
ASN 4570.0277
VAL 4580.0332
PRO 4590.0370
PHE 4600.0364
SER 4610.0425
PRO 4620.0437
ASP 4630.0485
GLY 4640.0443
LYS 4650.0487
PRO 4660.0474
CYS 4670.0483
THR 4680.0492
PRO 4690.0464
PRO 4700.0483
ALA 4710.0515
LEU 4720.0522
ASN 4730.0483
CYS 4740.0440
TYR 4750.0370
TRP 4760.0316
PRO 4770.0266
LEU 4780.0206
ASN 4790.0177
ASP 4800.0119
TYR 4810.0082
GLY 4820.0076
PHE 4830.0050
TYR 4840.0056
THR 4850.0055
THR 4860.0045
THR 4870.0024
GLY 4880.0011
ILE 4890.0026
GLY 4900.0044
TYR 4910.0035
GLN 4920.0013
PRO 4930.0021
TYR 4940.0015
ARG 4950.0027
VAL 4960.0028
VAL 4970.0053
VAL 4980.0066
LEU 4990.0097
SER 5000.0107
PHE 5010.0150
GLU 5020.0150
LEU 5030.0191
LEU 5040.0179
PRO 5070.0228
ALA 5080.0230
THR 5090.0221
VAL 5100.0219
CYS 5110.0260
GLY 5120.0281
PRO 5130.0321
GLU 10.0091
VAL 20.0088
GLN 30.0085
LEU 40.0082
VAL 50.0076
GLN 60.0074
SER 70.0073
GLY 80.0071
ALA 90.0069
GLU 100.0078
VAL 110.0089
LYS 120.0100
LYS 130.0114
PRO 140.0123
GLY 150.0133
GLU 160.0119
SER 170.0108
LEU 180.0094
LYS 190.0087
ILE 200.0076
SER 210.0080
CYS 220.0081
GLN 230.0084
GLY 240.0087
SER 250.0090
GLY 260.0093
TYR 270.0095
SER 280.0098
PHE 290.0097
THR 300.0098
SER 310.0099
TYR 320.0096
TRP 330.0096
ILE 340.0091
GLY 350.0089
TRP 360.0086
VAL 370.0086
ARG 380.0085
GLN 390.0078
MET 400.0080
PRO 410.0072
GLY 420.0067
LYS 430.0077
GLY 440.0080
LEU 450.0085
GLU 460.0090
TRP 470.0093
MET 480.0095
GLY 490.0095
ILE 500.0096
ILE 510.0097
TYR 520.0099
PRO 520.0101
GLY 530.0103
GLU 540.0094
SER 550.0095
ASP 560.0094
THR 570.0096
ARG 580.0097
TYR 590.0097
SER 600.0097
SER 610.0100
SER 620.0101
PHE 630.0098
GLN 640.0102
GLY 650.0113
HIS 660.0106
VAL 670.0099
THR 680.0099
ILE 690.0092
SER 700.0095
ALA 710.0094
ASP 720.0094
LYS 730.0095
SER 740.0094
ILE 750.0090
SER 760.0091
THR 770.0087
ALA 780.0088
TYR 790.0087
LEU 800.0088
GLN 810.0093
TRP 820.0103
SER 820.0115
SER 820.0120
LEU 820.0109
LYS 830.0113
ALA 840.0106
SER 850.0100
ASP 860.0095
THR 870.0084
ALA 880.0076
MET 890.0073
TYR 900.0078
TYR 910.0078
CYS 920.0082
ALA 930.0094
ARG 940.0093
ILE 950.0093
ARG 960.0092
GLY 970.0096
VAL 980.0091
TYR 990.0089
SER 1000.0084
SER 1000.0084
SER 1000.0082
SER 1000.0082
GLY 1000.0088
TRP 1000.0093
ILE 1000.0098
GLY 1000.0103
GLY 1000.0107
ASP 1010.0085
TYR 1020.0082
TRP 1030.0080
GLY 1040.0078
GLN 1050.0068
GLY 1060.0069
THR 1070.0069
LEU 1080.0069
VAL 1090.0075
THR 1100.0082
VAL 1110.0099
SER 1120.0110
SER 1130.0144
ALA 1140.0135
SER 1150.0146
THR 1160.0139
LYS 1170.0146
GLY 1180.0143
PRO 1190.0126
SER 1200.0132
VAL 1210.0131
PHE 1220.0124
PRO 1230.0127
LEU 1240.0108
ALA 1250.0130
PRO 1260.0136
SER 1270.0134
SER 1280.0135
LYS 1290.0109
SER 1300.0115
THR 1310.0140
THR 1310.0140
SER 1320.0148
GLY 1330.0176
GLY 1340.0187
THR 1350.0166
ALA 1360.0150
ALA 1370.0124
LEU 1380.0123
GLY 1390.0112
CYS 1400.0111
LEU 1410.0090
VAL 1420.0098
LYS 1430.0096
ASP 1440.0107
TYR 1450.0109
PHE 1460.0108
PRO 1470.0098
GLU 1480.0077
PRO 1490.0084
VAL 1500.0098
THR 1510.0105
VAL 1520.0115
SER 1530.0139
TRP 1540.0154
ASN 1550.0182
SER 1560.0182
GLY 1570.0172
ALA 1580.0189
LEU 1590.0171
THR 1600.0153
SER 1610.0154
SER 1610.0154
GLY 1620.0132
VAL 1630.0115
HIS 1640.0087
THR 1650.0076
PHE 1660.0049
PRO 1670.0034
ALA 1680.0046
VAL 1690.0041
LEU 1700.0065
GLN 1710.0077
SER 1720.0097
SER 1730.0115
GLY 1740.0108
LEU 1750.0100
TYR 1760.0077
SER 1770.0071
SER 1770.0071
LEU 1780.0061
SER 1790.0070
SER 1790.0070
SER 1800.0088
VAL 1810.0099
VAL 1820.0123
THR 1830.0138
VAL 1840.0166
PRO 1850.0190
SER 1860.0186
SER 1870.0214
SER 1880.0212
LEU 1890.0197
GLY 1900.0223
THR 1910.0238
GLN 1920.0220
THR 1930.0207
TYR 1940.0180
ILE 1950.0174
CYS 1960.0151
ASN 1970.0154
VAL 1980.0137
ASN 1990.0140
HIS 2000.0131
LYS 2010.0139
PRO 2020.0138
SER 2030.0157
ASN 2040.0171
THR 2050.0167
LYS 2060.0170
VAL 2070.0169
ASP 2080.0176
LYS 2090.0168
LYS 2100.0179
VAL 2110.0160
GLU 2120.0173
PRO 2130.0169
LYS 2140.0156
SER 2150.0168
CYS 2160.0145
ASP 10.0112
ILE 20.0109
GLN 30.0107
MET 40.0103
THR 50.0103
GLN 60.0094
SER 70.0093
PRO 80.0085
SER 90.0083
SER 100.0068
LEU 110.0077
SER 120.0075
ALA 130.0080
SER 140.0077
VAL 150.0067
GLY 160.0072
ASP 170.0077
ARG 180.0086
VAL 190.0079
THR 200.0088
ILE 210.0086
THR 220.0094
CYS 230.0097
ARG 240.0106
ALA 250.0107
SER 260.0113
GLN 270.0114
SER 280.0112
ILE 290.0105
SER 300.0103
SER 310.0096
TYR 320.0095
LEU 330.0099
ASN 340.0092
TRP 350.0085
TYR 360.0079
GLN 370.0067
GLN 380.0063
LYS 390.0055
PRO 400.0053
GLY 410.0055
LYS 420.0057
ALA 430.0065
PRO 440.0072
LYS 450.0075
LEU 460.0081
LEU 470.0081
ILE 480.0087
TYR 490.0090
ALA 500.0098
ALA 510.0095
SER 520.0092
SER 530.0091
LEU 540.0086
GLN 550.0084
SER 560.0081
GLY 570.0073
VAL 580.0073
PRO 590.0072
SER 600.0080
ARG 610.0077
PHE 620.0079
SER 630.0089
GLY 640.0094
SER 650.0099
GLY 660.0103
SER 670.0106
GLY 680.0109
THR 690.0110
ASP 700.0105
PHE 710.0100
THR 720.0094
LEU 730.0090
THR 740.0088
ILE 750.0077
SER 760.0084
SER 770.0075
LEU 780.0066
GLN 790.0055
PRO 800.0048
GLU 810.0042
ASP 820.0053
PHE 830.0050
ALA 840.0051
THR 850.0064
TYR 860.0073
TYR 870.0081
CYS 880.0090
GLN 890.0097
GLN 900.0098
SER 910.0096
TYR 920.0097
SER 930.0099
THR 940.0097
PRO 950.0098
ARG 950.0102
GLN 950.0104
TRP 960.0102
THR 970.0101
PHE 980.0094
GLY 990.0093
GLN 1000.0087
GLY 1010.0079
THR 1020.0074
LYS 1030.0059
VAL 1040.0060
GLU 1050.0055
ILE 1060.0070
LYS 1070.0097
ARG 1080.0114
THR 1090.0149
VAL 1100.0142
ALA 1110.0135
ALA 1120.0130
PRO 1130.0110
SER 1140.0116
SER 1140.0116
VAL 1150.0094
PHE 1160.0090
ILE 1170.0074
PHE 1180.0080
PRO 1190.0077
PRO 1200.0087
SER 1210.0117
ASP 1220.0136
GLU 1230.0149
GLN 1240.0126
LEU 1250.0124
LYS 1260.0154
SER 1270.0150
GLY 1280.0134
THR 1290.0107
ALA 1300.0083
SER 1310.0065
VAL 1320.0049
VAL 1330.0047
CYS 1340.0048
LEU 1350.0064
LEU 1360.0075
ASN 1370.0091
ASN 1380.0100
PHE 1390.0101
TYR 1400.0104
PRO 1410.0101
ARG 1420.0075
GLU 1430.0084
ALA 1440.0079
LYS 1450.0076
VAL 1460.0054
GLN 1470.0049
TRP 1480.0027
LYS 1490.0029
VAL 1500.0009
ASP 1510.0012
ASN 1520.0040
ALA 1530.0046
LEU 1540.0055
GLN 1550.0048
SER 1560.0064
GLY 1570.0070
ASN 1580.0053
SER 1590.0029
GLN 1600.0024
GLU 1610.0008
SER 1620.0010
VAL 1630.0028
THR 1640.0041
GLU 1650.0027
GLN 1660.0050
ASP 1670.0070
SER 1680.0076
LYS 1690.0101
ASP 1700.0109
SER 1710.0088
THR 1720.0088
TYR 1730.0069
SER 1740.0064
LEU 1750.0045
SER 1760.0036
SER 1770.0017
THR 1780.0025
LEU 1790.0027
THR 1800.0055
LEU 1810.0071
SER 1820.0099
LYS 1830.0106
ALA 1840.0109
ASP 1850.0083
TYR 1860.0069
GLU 1870.0081
LYS 1880.0067
HIS 1890.0039
LYS 1900.0037
VAL 1910.0031
TYR 1920.0028
ALA 1930.0041
CYS 1940.0044
GLU 1950.0068
VAL 1960.0081
THR 1970.0103
HIS 1980.0112
GLN 1990.0136
GLY 2000.0144
LEU 2010.0146
SER 2020.0169
SER 2030.0150
PRO 2040.0118
VAL 2050.0107
THR 2060.0085
LYS 2070.0080
SER 2080.0066
PHE 2090.0070
ASN 2100.0065
ARG 2110.0071
GLY 2120.0099
GLU 2130.0106
CYS 2140.0130

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.