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***  KcsA  ***

<R2> analysis for 201122125230113009

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0697
ALA 230.0179
LEU 240.0170
HIS 250.0124
TRP 260.0098
ARG 270.0111
ALA 280.0149
ALA 290.0144
GLY 300.0187
ALA 310.0234
ALA 320.0209
THR 330.0202
VAL 340.0228
LEU 350.0194
LEU 360.0160
VAL 370.0149
ILE 380.0169
VAL 390.0178
LEU 400.0139
LEU 410.0140
ALA 420.0207
GLY 430.0205
SER 440.0167
TYR 450.0228
LEU 460.0278
ALA 470.0250
VAL 480.0258
LEU 490.0336
ALA 500.0339
GLU 510.0309
ARG 520.0335
GLY 530.0416
ALA 540.0402
PRO 550.0374
GLY 560.0286
ALA 570.0228
GLN 580.0215
LEU 590.0204
ILE 600.0266
THR 610.0223
TYR 620.0195
PRO 630.0134
ARG 640.0127
ALA 650.0138
LEU 660.0102
TRP 670.0087
TRP 680.0100
SER 690.0119
VAL 700.0103
GLU 710.0078
THR 720.0100
ALA 730.0121
THR 740.0115
THR 750.0100
VAL 760.0076
GLY 770.0047
TYR 780.0021
GLY 790.0049
ASP 800.0074
LEU 810.0100
TYR 820.0123
PRO 830.0187
VAL 840.0230
THR 850.0296
LEU 860.0307
TRP 870.0330
GLY 880.0256
ARG 890.0215
CYS 900.0265
VAL 910.0229
ALA 920.0166
VAL 930.0189
VAL 940.0203
VAL 950.0157
MET 960.0144
VAL 970.0158
ALA 980.0146
GLY 990.0135
ILE 1000.0143
THR 1010.0136
SER 1020.0132
PHE 1030.0123
GLY 1040.0110
LEU 1050.0107
VAL 1060.0100
THR 1070.0077
ALA 1080.0069
ALA 1090.0085
LEU 1100.0080
ALA 1110.0098
THR 1120.0137
TRP 1130.0137
PHE 1140.0155
VAL 1150.0222
GLY 1160.0255
ARG 1170.0310
GLU 1180.0437
GLN 1190.0697
ALA 230.0283
LEU 240.0226
HIS 250.0190
TRP 260.0228
ARG 270.0217
ALA 280.0145
ALA 290.0150
GLY 300.0194
ALA 310.0117
ALA 320.0084
THR 330.0132
VAL 340.0160
LEU 350.0171
LEU 360.0168
VAL 370.0189
ILE 380.0230
VAL 390.0196
LEU 400.0173
LEU 410.0194
ALA 420.0202
GLY 430.0152
SER 440.0127
TYR 450.0136
LEU 460.0129
ALA 470.0085
VAL 480.0055
LEU 490.0069
ALA 500.0079
GLU 510.0037
ARG 520.0012
GLY 530.0060
ALA 540.0097
PRO 550.0125
GLY 560.0077
ALA 570.0068
GLN 580.0071
LEU 590.0030
ILE 600.0038
THR 610.0080
TYR 620.0112
PRO 630.0147
ARG 640.0108
ALA 650.0084
LEU 660.0128
TRP 670.0122
TRP 680.0083
SER 690.0104
VAL 700.0125
GLU 710.0088
THR 720.0087
ALA 730.0115
THR 740.0110
THR 750.0094
VAL 760.0073
GLY 770.0043
TYR 780.0036
GLY 790.0025
ASP 800.0064
LEU 810.0042
TYR 820.0008
PRO 830.0031
VAL 840.0070
THR 850.0086
LEU 860.0120
TRP 870.0120
GLY 880.0076
ARG 890.0077
CYS 900.0120
VAL 910.0121
ALA 920.0095
VAL 930.0126
VAL 940.0148
VAL 950.0138
MET 960.0127
VAL 970.0141
ALA 980.0150
GLY 990.0128
ILE 1000.0115
THR 1010.0105
SER 1020.0108
PHE 1030.0090
GLY 1040.0084
LEU 1050.0082
VAL 1060.0112
THR 1070.0094
ALA 1080.0080
ALA 1090.0140
LEU 1100.0133
ALA 1110.0109
THR 1120.0170
TRP 1130.0229
PHE 1140.0189
VAL 1150.0249
GLY 1160.0322
ARG 1170.0378
GLU 1180.0438
GLN 1190.0620
ALA 230.0187
LEU 240.0178
HIS 250.0129
TRP 260.0101
ARG 270.0115
ALA 280.0153
ALA 290.0141
GLY 300.0177
ALA 310.0225
ALA 320.0198
THR 330.0189
VAL 340.0215
LEU 350.0178
LEU 360.0144
VAL 370.0134
ILE 380.0147
VAL 390.0153
LEU 400.0119
LEU 410.0115
ALA 420.0174
GLY 430.0175
SER 440.0141
TYR 450.0188
LEU 460.0234
ALA 470.0213
VAL 480.0216
LEU 490.0281
ALA 500.0287
GLU 510.0261
ARG 520.0278
GLY 530.0346
ALA 540.0336
PRO 550.0311
GLY 560.0241
ALA 570.0189
GLN 580.0178
LEU 590.0172
ILE 600.0220
THR 610.0183
TYR 620.0160
PRO 630.0109
ARG 640.0106
ALA 650.0118
LEU 660.0088
TRP 670.0086
TRP 680.0095
SER 690.0109
VAL 700.0099
GLU 710.0078
THR 720.0096
ALA 730.0115
THR 740.0111
THR 750.0097
VAL 760.0075
GLY 770.0048
TYR 780.0024
GLY 790.0044
ASP 800.0064
LEU 810.0088
TYR 820.0111
PRO 830.0165
VAL 840.0202
THR 850.0257
LEU 860.0270
TRP 870.0288
GLY 880.0223
ARG 890.0193
CYS 900.0235
VAL 910.0200
ALA 920.0148
VAL 930.0171
VAL 940.0180
VAL 950.0140
MET 960.0131
VAL 970.0143
ALA 980.0131
GLY 990.0123
ILE 1000.0130
THR 1010.0125
SER 1020.0123
PHE 1030.0114
GLY 1040.0099
LEU 1050.0103
VAL 1060.0094
THR 1070.0072
ALA 1080.0070
ALA 1090.0086
LEU 1100.0078
ALA 1110.0098
THR 1120.0139
TRP 1130.0139
PHE 1140.0158
VAL 1150.0222
GLY 1160.0256
ARG 1170.0312
GLU 1180.0428
GLN 1190.0687
ALA 230.0296
LEU 240.0232
HIS 250.0195
TRP 260.0237
ARG 270.0226
ALA 280.0148
ALA 290.0157
GLY 300.0205
ALA 310.0132
ALA 320.0099
THR 330.0151
VAL 340.0180
LEU 350.0182
LEU 360.0177
VAL 370.0201
ILE 380.0240
VAL 390.0202
LEU 400.0176
LEU 410.0194
ALA 420.0206
GLY 430.0155
SER 440.0120
TYR 450.0126
LEU 460.0136
ALA 470.0095
VAL 480.0053
LEU 490.0090
ALA 500.0118
GLU 510.0086
ARG 520.0067
GLY 530.0130
ALA 540.0161
PRO 550.0180
GLY 560.0116
ALA 570.0089
GLN 580.0072
LEU 590.0017
ILE 600.0032
THR 610.0044
TYR 620.0079
PRO 630.0121
ARG 640.0087
ALA 650.0066
LEU 660.0117
TRP 670.0120
TRP 680.0076
SER 690.0100
VAL 700.0125
GLU 710.0088
THR 720.0087
ALA 730.0116
THR 740.0113
THR 750.0094
VAL 760.0074
GLY 770.0041
TYR 780.0037
GLY 790.0029
ASP 800.0068
LEU 810.0039
TYR 820.0018
PRO 830.0053
VAL 840.0100
THR 850.0125
LEU 860.0155
TRP 870.0152
GLY 880.0098
ARG 890.0095
CYS 900.0135
VAL 910.0129
ALA 920.0100
VAL 930.0132
VAL 940.0151
VAL 950.0140
MET 960.0129
VAL 970.0143
ALA 980.0153
GLY 990.0131
ILE 1000.0115
THR 1010.0105
SER 1020.0111
PHE 1030.0093
GLY 1040.0086
LEU 1050.0085
VAL 1060.0117
THR 1070.0098
ALA 1080.0082
ALA 1090.0144
LEU 1100.0135
ALA 1110.0109
THR 1120.0172
TRP 1130.0232
PHE 1140.0189
VAL 1150.0253
GLY 1160.0327
ARG 1170.0385
GLU 1180.0446
GLN 1190.0632

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.