*** ***
output from eigenvector calculation:
STDOUT:
Build Tirion matrix:
Pdbmat> Computes the Hessian matrix, using an Elastic Network Model.
Pdbmat> Version 3.50, Fevrier 2004.
Pdbmat> Options to be read in pdbmat.dat file.
Pdbmat> Coordinate filename = 24041412001571065.atom
Pdbmat> Distance cutoff = 10.00
Force constant = 10.00
Origin of mass values = CONS
Pdbmat> Levelshift = 1.0E-09
PRINTing level = 2
Pdbmat> Coordinate file 24041412001571065.atom to be opened.
Openam> File opened: 24041412001571065.atom
Pdbmat> Coordinate file in PDB format.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 195
First residue number = 96
Last residue number = 401
Number of atoms found = 198
Mean number per residue = 1.0
Pdbmat> Coordinate statistics:
= 2.638828 +/- 9.174735 From: -18.534000 To: 21.554000
= 0.228030 +/- 7.563413 From: -19.065000 To: 16.353000
= 31.269444 +/- 10.775105 From: 11.962000 To: 53.464000
Pdbmat> Masses are all set to one.
%Pdbmat-W> residue:'ZN ' is not a well known amino-acid.
%Pdbmat-W> 1 residue(s) not known.
Openam> File opened: pdbmat.xyzm
Pdbmat> Coordinates and masses considered are saved.
Openam> File opened: pdbmat.sdijf
Pdbmat> Matrix statistics:
Pdbmat> The matrix is 9.6076 % Filled.
Pdbmat> 16978 non-zero elements.
Pdbmat> 1755 atom-atom interactions.
Pdbmat> Number per atom= 17.73 +/- 5.51
Maximum number = 32
Minimum number = 6
Pdbmat> Matrix trace = 35100.0
Pdbmat> Larger element = 117.660
Pdbmat> 0 elements larger than +/- 1.0E+10
Pdbmat> Normal end.
using diagstd (there are 198 atoms in your structure)
Diagstd> Version 1.05, August 2004.
Diagstd> Matrix to be read from file: pdbmat.sdijf
Diagstd> Lecture de la matrice -Format CERFACS-
Diagstd> Matrix dimension (Nord) = 594
Diagstd> Number of non-zero elements 16978
Diagstd> Nb of elements found twice: 0
Diagstd> Nb of elements > 1E+10 : 0
Diagstd> Matrix trace: 35100.0000006
%Diagstd-Wn: Nb on non-zero elements there: 594
Openam> file on opening on unit 11:
pdbmat.eigenfacs
Diagstd> Diagonalization.
Diagstd> 594 eigenvectors are about to be computed.
Diagstd> Sum of eigenvalues = 35100.0000006
Diagstd> Eigenvalues:
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.5121919 0.6065285 0.8855821 0.9600429
1.0752153 1.4762761 1.5645692 1.9053234 2.0189267
2.2774778 2.5088792 2.5204291 2.6086153 2.8636098
3.0734164 3.3332164 3.6345450 3.8648926 4.0194850
4.1786725 4.3987524 4.6457218 4.9757064 5.1518873
5.3731078 5.6905345 5.7639687 5.9702231 6.0952353
6.6331748 6.7595924 6.8972350 7.0117287 7.2465085
7.4054497 7.7609415 7.9948835 8.0933869 8.5139399
8.6421104 8.9836287 9.2273594 9.4391900 9.6097278
9.8594574 10.0274785 10.2305684 10.5198205 10.7301564
10.8444635 11.3679529 11.4015423 11.4975162 11.7905813
11.8576384 12.0784952 12.3111597 12.6740999 13.1749013
13.1991759 13.7334331 14.0296943 14.1903329 14.2774325
14.6474744 14.8084063 14.8792911 15.0689548 15.5538454
15.6107021 16.0827952 16.2582689 16.4179734 16.5798523
16.7943675 17.1362855 17.1388866 17.3502658 17.6463200
17.8599241 17.9644538 18.1013461 18.2708598 18.7200561
19.1318000 19.1420473 19.1917003 19.4365568 19.7331908
19.8489989 19.8862251 20.2081291 20.3151507 20.6489924
20.8874448 21.1572465 21.3044489 21.7101883 21.7832741
21.9795476 22.2450434 22.3887895 22.7239434 22.9487330
23.2933270 23.4133624 23.5151451 23.6129156 23.9299210
24.1368657 24.2268181 24.3580857 24.4715775 24.8932203
25.0148706 25.2170671 25.3644386 25.7446019 25.7931333
25.8978518 25.9838573 26.3697517 26.4842942 26.6329321
26.7535396 26.8475206 26.9558041 27.2060675 27.5952554
27.7240201 27.8842493 27.9482162 28.1097944 28.1795788
28.6162122 28.7299821 28.9751760 29.0895370 29.3564553
29.4463028 29.6600995 29.7428060 29.9110103 30.0924734
30.1281293 30.3055020 30.4713794 30.6425555 30.7905172
31.0410243 31.2521258 31.3405372 31.4905840 31.5857943
31.7922120 32.1539495 32.2471796 32.5454588 32.6273713
32.9247293 32.9988305 33.2775136 33.3326884 33.5274263
33.7750009 33.9229429 34.0206099 34.2046459 34.3368667
34.7898169 34.8403331 34.9285008 35.0099386 35.1684190
35.3871530 35.4681409 35.7684622 35.8294041 36.0667732
36.1901914 36.3508426 36.6204858 36.8292434 37.0306642
37.1306843 37.2809891 37.4611409 37.5333432 37.6225074
37.8644084 38.0585016 38.2969487 38.4587219 38.7535532
38.8208500 38.9111904 39.1133094 39.1666513 39.4875377
39.6580386 39.8009298 39.8409857 39.9804639 40.1578842
40.2843098 40.4640138 40.6083904 40.7659210 41.0203577
41.0318495 41.1121963 41.3154380 41.4294869 41.5617753
41.6307354 41.8337356 42.0814829 42.0918082 42.3327737
42.5255953 42.5720227 42.7176157 42.9453501 43.2891745
43.4805805 43.6619831 43.7174544 43.9041382 44.0538325
44.2635889 44.3902352 44.5879079 44.7694242 44.9303629
45.0151027 45.1725249 45.2596219 45.5747118 45.6672393
45.7898440 46.0101600 46.1936535 46.3239625 46.5722140
46.6415857 46.8967955 47.0419629 47.2527694 47.4966673
47.5148523 47.8270524 47.9818715 48.1893067 48.3538003
48.4774160 48.5022173 48.8166003 48.9946737 49.1446586
49.2629061 49.5190718 49.5721889 49.6517614 49.7122455
49.8760826 50.1239431 50.2305847 50.4887216 50.5999197
50.7456816 50.9712985 51.0089064 51.3455449 51.5154078
51.5529940 51.8016278 51.9644446 52.1653029 52.3066730
52.4907756 52.5540915 52.8638604 52.9754009 53.0396832
53.1215268 53.2943827 53.4344348 53.6256173 53.7845644
53.8803976 53.9769666 54.1534824 54.3255303 54.5403655
54.7302485 54.8886198 55.0568650 55.2147603 55.4117339
55.6875622 55.7480220 55.8802576 56.2627835 56.3842477
56.4099017 56.5285506 56.7734713 56.8922158 57.2257202
57.4582483 57.5918913 57.8302702 57.8921567 58.0721566
58.4718469 58.6166878 58.8392511 59.0254166 59.2164197
59.4061549 59.6680668 59.7862418 59.8801918 59.9882553
60.2059873 60.4411917 60.5071343 60.8650890 60.9387368
61.3807892 61.5394286 61.6775471 61.7487035 62.2765120
62.3106901 62.3454388 62.6704471 62.8490219 63.1475974
63.2079863 63.3354041 63.6991298 63.9597508 64.2323594
64.2833563 64.6728943 64.7474105 64.9177332 65.0728635
65.3730655 65.4261372 65.7335369 66.0098289 66.2820215
66.3878830 66.5201095 66.6602265 66.9030202 67.1090774
67.2121444 67.5163316 67.5856895 67.8395439 68.0540829
68.3428576 68.4858671 68.6896726 69.1630613 69.3243513
69.4397272 69.6090027 69.8577052 70.1493376 70.3247182
70.4508460 70.6482586 70.6719632 70.9051369 71.0638315
71.3248331 71.3736237 71.5711089 71.9874019 72.2265159
72.3208053 72.5270728 72.5902110 72.6551549 72.8125853
73.1355593 73.2804698 73.5868015 73.6722043 73.8213174
74.0455093 74.2562567 74.4105142 74.6525066 74.7890380
74.9380305 75.1823766 75.2394244 75.7392261 75.9617308
75.9679189 76.2506594 76.4971846 76.8022728 77.1886556
77.3653473 77.4885569 77.7595346 77.9913766 78.1791602
78.2721940 78.4920095 78.8630900 79.1620733 79.3953909
79.5279569 79.6248112 79.8813288 80.1757310 80.3206369
80.4627171 80.6587784 80.8358752 81.2667439 81.4362457
81.5599930 81.8485651 82.1530130 82.6817049 82.9321913
83.1927869 83.5474437 83.7594984 83.8318055 84.3753355
84.3855857 84.4276009 84.7276947 85.0418568 85.1505965
85.3733871 85.6708690 86.1819481 86.5114304 86.6996533
87.1483181 87.3413162 87.5095272 87.6976208 87.8464849
88.1169527 88.2203210 88.5888345 88.8517357 89.2954923
89.4240791 89.4980112 89.9813921 90.3696472 90.5550704
90.6252235 90.9041740 91.3104474 91.7502410 91.8999616
92.1541881 92.2045183 92.4140237 92.7956791 93.0882740
93.3610477 93.5685610 93.6783699 94.2549608 94.3233402
94.9012063 95.0923987 95.1491444 95.8411501 96.3976334
96.5790211 97.1908927 97.3746573 97.7410098 97.8171495
98.6635630 98.8391456 99.3576590 99.4010501 99.7888897
100.0570608 100.5139548 100.7475993 101.0250142 101.1713274
101.4135286 101.8572630 102.2609486 102.6405616 102.7237238
103.0827799 103.3134373 103.6412239 104.1340505 104.3256424
104.7291119 105.1367925 105.8775185 106.1243878 106.3748548
106.5670816 106.7849484 107.3429755 107.5536949 108.2059560
108.2286728 108.8449776 109.1848078 109.7030882 110.7019921
110.8825165 111.3023356 111.6070157 112.4564582 112.8760362
113.0710075 113.4644732 114.0292908 114.4631941 114.5525694
114.7762413 115.1897042 115.7437207 116.1111889 116.5680558
116.9850151 117.5400736 118.1157874 118.8268042 118.9934777
119.7117485 120.1308396 120.4667576 121.1144375 121.2297816
122.1141559 122.2379614 122.8258379 123.6250592 124.0650843
124.9595349 125.5849354 126.2433892 126.6226450 128.5155064
129.0803655 130.2125372 130.5454978 130.8644240 131.8661343
132.2602563 132.8739271 133.6253541 135.7555639 136.1903572
136.7185471 137.8113139 137.8736775 139.3337956 139.8924904
140.5551703 141.4720496 142.9727979 144.4743299 145.7324504
149.0872288 150.4793686 152.7712968 154.1172340 154.6686560
158.9956533 160.3184797 164.9048072 171.0508100
Diagstd> Frequencies (cm-1, if the matrix is a hessien in CHARMM units):
0.0034264 0.0034318 0.0034382 0.0034407 0.0034460
0.0034504 77.7162162 84.5708898 102.1903065 106.3997468
112.6011949 131.9407864 135.8290502 149.8924078 154.2963146
163.8786404 172.0026554 172.3981182 175.3881701 183.7605150
190.3732742 198.2563190 207.0238139 213.4833418 217.7110579
221.9803065 227.7508669 234.0571330 242.2270585 246.4781675
251.7143970 259.0429693 260.7090388 265.3325681 268.0961130
279.6765167 282.3290291 285.1890139 287.5463320 292.3207769
295.5091955 302.5188811 307.0445189 308.9302467 316.8550049
319.2310925 325.4776545 329.8632990 333.6281174 336.6284551
340.9744104 343.8675142 347.3322912 352.2081856 355.7118280
357.6014873 366.1309245 366.6714379 368.2114558 372.8746752
373.9335063 377.3998258 381.0173600 386.5928735 394.1567475
394.5196954 402.4248940 406.7423413 409.0642932 410.3177810
415.6010672 417.8779361 418.8768900 421.5381116 428.2665640
429.0486088 435.4878527 437.8571359 440.0024094 442.1662692
445.0175175 449.5247668 449.5588825 452.3226611 456.1654156
458.9179916 460.2589992 462.0092986 464.1675470 469.8387723
474.9776745 475.1048593 475.7206540 478.7457658 482.3851587
483.7985742 484.2520371 488.1556662 489.4465865 493.4517717
496.2927581 499.4877630 501.2223546 505.9726891 506.8236341
509.1018260 512.1673730 513.8195059 517.6510861 520.2051373
524.0962373 525.4448910 526.5857609 527.6793367 531.2095974
533.5015895 534.4947816 535.9408457 537.1879510 541.7960342
543.1182680 545.3088767 546.8999801 550.9832176 551.5023041
552.6207032 553.5375550 557.6327863 558.8425710 560.4085742
561.6760487 562.6617243 563.7952674 566.4064181 570.4433074
571.7726565 573.4225377 574.0798811 575.7369655 576.4511750
580.8999699 582.0535710 584.5320411 585.6844378 588.3653494
589.2650280 591.4003564 592.2243361 593.8965756 595.6953682
596.0481760 597.8001526 599.4339518 601.1152850 602.5648196
605.0110440 607.0648150 607.9228929 609.3764092 610.2969248
612.2878665 615.7613740 616.6534252 619.4988141 620.2779215
623.0980423 623.7988279 626.4273559 626.9464556 628.7751774
631.0924216 632.4730739 633.3828903 635.0937368 636.3200550
640.5032703 640.9681203 641.7786318 642.5263682 643.9789962
645.9785420 646.7173211 649.4495420 650.0025686 652.1521410
653.2670004 654.7153475 657.1391337 659.0095056 660.8091245
661.7009482 663.0388764 664.6389367 665.2791389 666.0688881
668.2067646 669.9171918 672.0125242 673.4303787 676.0067680
676.5934673 677.3802638 679.1372659 679.6002043 682.3784564
683.8500706 685.0809469 685.4255953 686.6243400 688.1461615
689.2285264 690.7641027 691.9953372 693.3362537 695.4965853
695.5939989 696.2747071 697.9936327 698.9563546 700.0713830
700.6519282 702.3581140 704.4347924 704.5212091 706.5349387
708.1422084 708.5286613 709.7391833 711.6285351 714.4715373
716.0493374 717.5414747 717.9971378 719.5285131 720.7541117
722.4679605 723.5007792 725.1098885 726.5843424 727.8891462
728.5752313 729.8480688 730.5513388 733.0899159 733.8337123
734.8181287 736.5837815 738.0511075 739.0913698 741.0691295
741.6208544 743.6470579 744.7971358 746.4640792 748.3880585
748.5313118 750.9864279 752.2009399 753.8251438 755.1106343
756.0752319 756.2686134 758.7156555 760.0982195 761.2607555
762.1760438 764.1551210 764.5648506 765.1782379 765.6441533
766.9047856 768.8080010 769.6254081 771.6004415 772.4496735
773.5614616 775.2791940 775.5651513 778.1201534 779.4061914
779.6904708 781.5683856 782.7956890 784.3071012 785.3691343
786.7500425 787.2244002 789.5410545 790.3735648 790.8529538
791.4628866 792.7495392 793.7904879 795.2092672 796.3869008
797.0960854 797.8100771 799.1135137 800.3819160 801.9629455
803.3577548 804.5192413 805.7513089 806.9058715 808.3438716
810.3532599 810.7930397 811.7540800 814.5277548 815.4065120
815.5919899 816.4492709 818.2160696 819.0712923 821.4684984
823.1357635 824.0924794 825.7962204 826.2379612 827.5214456
830.3643325 831.3921463 832.9690186 834.2857215 835.6344834
836.9721397 838.8151462 839.6453894 840.3048526 841.0627438
842.5877124 844.2319608 844.6923722 847.1872497 847.6996506
850.7687205 851.8674220 852.8228480 853.3146503 856.9538231
857.1889436 857.4279240 859.6599157 860.8838127 862.9262809
863.3387963 864.2085388 866.6864963 868.4576832 870.3064809
870.6518999 873.2858611 873.7888173 874.9373443 875.9821150
878.0003832 878.3567042 880.4177319 882.2660829 884.0832305
884.7889502 885.6696408 886.6019306 888.2150795 889.5818517
890.2647057 892.2770014 892.7351907 894.4101933 895.8233392
897.7219561 898.6607209 899.9968793 903.0928091 904.1452136
904.8972810 905.9995588 907.6166154 909.5091391 910.6453634
911.4616212 912.7377461 912.8908587 914.3956055 915.4182996
917.0978228 917.4114448 918.6797708 921.3476451 922.8765550
923.4787510 924.7947488 925.1971998 925.6109779 926.6132497
928.6660604 929.5856328 931.5265629 932.0669583 933.0097368
934.4254163 935.7542458 936.7256945 938.2476332 939.1052185
940.0401813 941.5715019 941.9286622 945.0520138 946.4391700
946.4777193 948.2374032 949.7690346 951.6610974 954.0519396
955.1432700 955.9035328 957.5734727 958.9999253 960.1537461
960.7248714 962.0729502 964.3444272 966.1706940 967.5934633
968.4009192 968.9904303 970.5500148 972.3368482 973.2151299
974.0755159 975.2615456 976.3316148 978.9301623 979.9505305
980.6947946 982.4281889 984.2536373 987.4156176 988.9101870
990.4626811 992.5716428 993.8304849 994.2593644 997.4773356
997.5379225 997.7862262 999.5579444 1001.4093623 1002.0493893
1003.3594288 1005.1060019 1008.0995799 1010.0247747 1011.1229328
1013.7358032 1014.8576887 1015.8344782 1016.9256130 1017.7883473
1019.3539619 1019.9516787 1022.0797271 1023.5951942 1026.1481067
1026.8866750 1027.3110809 1030.0816107 1032.3015362 1033.3600477
1033.7602424 1035.3500116 1037.6610512 1040.1569784 1041.0053113
1042.4442035 1042.7288314 1043.9127936 1046.0661709 1047.7140534
1049.2479721 1050.4134052 1051.0295894 1054.2591738 1054.6415230
1057.8671877 1058.9322657 1059.2481737 1063.0930735 1066.1749297
1067.1775486 1070.5527364 1071.5643373 1073.5782172 1073.9962913
1078.6329369 1079.5922832 1082.4203671 1082.6566964 1084.7667766
1086.2233913 1088.7005962 1089.9652030 1091.4648154 1092.2549065
1093.5615384 1095.9513636 1098.1209793 1100.1573135 1100.6029120
1102.5247342 1103.7575460 1105.5071268 1108.1324198 1109.1513550
1111.2940538 1113.4549285 1117.3703868 1118.6722865 1119.9916126
1121.0031075 1122.1484176 1125.0766077 1126.1803559 1129.5900635
1129.7086305 1132.9206099 1134.6878048 1137.3776947 1142.5441693
1143.4753769 1145.6380231 1147.2049919 1151.5624129 1153.7086674
1154.7046406 1156.7119728 1159.5874112 1161.7915426 1162.2450297
1163.3791588 1165.4727178 1168.2720855 1170.1251563 1172.4249632
1174.5199503 1177.3030238 1180.1827296 1183.7295488 1184.5594425
1188.1291944 1190.2070992 1191.8700065 1195.0697089 1195.6386393
1199.9918213 1200.5999735 1203.4835210 1207.3926747 1209.5395336
1213.8918073 1216.9256734 1220.1117317 1221.9430650 1231.0424990
1233.7449088 1239.1437220 1240.7269898 1242.2416299 1246.9869764
1248.8490859 1251.7429836 1255.2774141 1265.2434546 1267.2679741
1269.7230322 1274.7872668 1275.0756734 1281.8095836 1284.3768855
1287.4153802 1291.6076335 1298.4403062 1305.2407515 1310.9116224
1325.9144433 1332.0905899 1342.1966880 1348.0961962 1350.5057453
1369.2662572 1374.9505312 1394.4788713 1420.2272716
Diagstd> Normal end.
B-factor analysis
Bfactors> Version 1.22, Bordeaux.
Getnam> Eigenvector filename ?
Getnam> 24041412001571065.eigenfacs
Openam> file on opening on unit 10:
24041412001571065.eigenfacs
Getnam> Corresponding pdb filename ?
Getnam> 24041412001571065.atom
Openam> file on opening on unit 11:
24041412001571065.atom
Getnum> Number of skipped eigenvectors ?
Getnum> 0
Getnum> Number of usefull eigenvectors ?
Getnum> 10000
%Getnum-Err: number larger than 106 This is not allowed. Sorry.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 195
First residue number = 96
Last residue number = 401
Number of atoms found = 198
Mean number per residue = 1.0
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Numero du vecteur CERFACS en lecture: 1
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9562E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 2
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9877E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 3
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0025E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 4
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0039E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 5
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0070E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 6
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0096E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 7
Rdmodfacs> Valeur propre du vecteur en lecture: 0.5122
Rdmodfacs> Numero du vecteur CERFACS en lecture: 8
Rdmodfacs> Valeur propre du vecteur en lecture: 0.6065
Rdmodfacs> Numero du vecteur CERFACS en lecture: 9
Rdmodfacs> Valeur propre du vecteur en lecture: 0.8856
Rdmodfacs> Numero du vecteur CERFACS en lecture: 10
Rdmodfacs> Valeur propre du vecteur en lecture: 0.9600
Rdmodfacs> Numero du vecteur CERFACS en lecture: 11
Rdmodfacs> Valeur propre du vecteur en lecture: 1.075
Rdmodfacs> Numero du vecteur CERFACS en lecture: 12
Rdmodfacs> Valeur propre du vecteur en lecture: 1.476
Rdmodfacs> Numero du vecteur CERFACS en lecture: 13
Rdmodfacs> Valeur propre du vecteur en lecture: 1.565
Rdmodfacs> Numero du vecteur CERFACS en lecture: 14
Rdmodfacs> Valeur propre du vecteur en lecture: 1.905
Rdmodfacs> Numero du vecteur CERFACS en lecture: 15
Rdmodfacs> Valeur propre du vecteur en lecture: 2.019
Rdmodfacs> Numero du vecteur CERFACS en lecture: 16
Rdmodfacs> Valeur propre du vecteur en lecture: 2.277
Rdmodfacs> Numero du vecteur CERFACS en lecture: 17
Rdmodfacs> Valeur propre du vecteur en lecture: 2.509
Rdmodfacs> Numero du vecteur CERFACS en lecture: 18
Rdmodfacs> Valeur propre du vecteur en lecture: 2.520
Rdmodfacs> Numero du vecteur CERFACS en lecture: 19
Rdmodfacs> Valeur propre du vecteur en lecture: 2.609
Rdmodfacs> Numero du vecteur CERFACS en lecture: 20
Rdmodfacs> Valeur propre du vecteur en lecture: 2.864
Rdmodfacs> Numero du vecteur CERFACS en lecture: 21
Rdmodfacs> Valeur propre du vecteur en lecture: 3.073
Rdmodfacs> Numero du vecteur CERFACS en lecture: 22
Rdmodfacs> Valeur propre du vecteur en lecture: 3.333
Rdmodfacs> Numero du vecteur CERFACS en lecture: 23
Rdmodfacs> Valeur propre du vecteur en lecture: 3.635
Rdmodfacs> Numero du vecteur CERFACS en lecture: 24
Rdmodfacs> Valeur propre du vecteur en lecture: 3.865
Rdmodfacs> Numero du vecteur CERFACS en lecture: 25
Rdmodfacs> Valeur propre du vecteur en lecture: 4.019
Rdmodfacs> Numero du vecteur CERFACS en lecture: 26
Rdmodfacs> Valeur propre du vecteur en lecture: 4.179
Rdmodfacs> Numero du vecteur CERFACS en lecture: 27
Rdmodfacs> Valeur propre du vecteur en lecture: 4.399
Rdmodfacs> Numero du vecteur CERFACS en lecture: 28
Rdmodfacs> Valeur propre du vecteur en lecture: 4.646
Rdmodfacs> Numero du vecteur CERFACS en lecture: 29
Rdmodfacs> Valeur propre du vecteur en lecture: 4.976
Rdmodfacs> Numero du vecteur CERFACS en lecture: 30
Rdmodfacs> Valeur propre du vecteur en lecture: 5.152
Rdmodfacs> Numero du vecteur CERFACS en lecture: 31
Rdmodfacs> Valeur propre du vecteur en lecture: 5.373
Rdmodfacs> Numero du vecteur CERFACS en lecture: 32
Rdmodfacs> Valeur propre du vecteur en lecture: 5.691
Rdmodfacs> Numero du vecteur CERFACS en lecture: 33
Rdmodfacs> Valeur propre du vecteur en lecture: 5.764
Rdmodfacs> Numero du vecteur CERFACS en lecture: 34
Rdmodfacs> Valeur propre du vecteur en lecture: 5.970
Rdmodfacs> Numero du vecteur CERFACS en lecture: 35
Rdmodfacs> Valeur propre du vecteur en lecture: 6.095
Rdmodfacs> Numero du vecteur CERFACS en lecture: 36
Rdmodfacs> Valeur propre du vecteur en lecture: 6.633
Rdmodfacs> Numero du vecteur CERFACS en lecture: 37
Rdmodfacs> Valeur propre du vecteur en lecture: 6.760
Rdmodfacs> Numero du vecteur CERFACS en lecture: 38
Rdmodfacs> Valeur propre du vecteur en lecture: 6.897
Rdmodfacs> Numero du vecteur CERFACS en lecture: 39
Rdmodfacs> Valeur propre du vecteur en lecture: 7.012
Rdmodfacs> Numero du vecteur CERFACS en lecture: 40
Rdmodfacs> Valeur propre du vecteur en lecture: 7.247
Rdmodfacs> Numero du vecteur CERFACS en lecture: 41
Rdmodfacs> Valeur propre du vecteur en lecture: 7.405
Rdmodfacs> Numero du vecteur CERFACS en lecture: 42
Rdmodfacs> Valeur propre du vecteur en lecture: 7.761
Rdmodfacs> Numero du vecteur CERFACS en lecture: 43
Rdmodfacs> Valeur propre du vecteur en lecture: 7.995
Rdmodfacs> Numero du vecteur CERFACS en lecture: 44
Rdmodfacs> Valeur propre du vecteur en lecture: 8.093
Rdmodfacs> Numero du vecteur CERFACS en lecture: 45
Rdmodfacs> Valeur propre du vecteur en lecture: 8.514
Rdmodfacs> Numero du vecteur CERFACS en lecture: 46
Rdmodfacs> Valeur propre du vecteur en lecture: 8.642
Rdmodfacs> Numero du vecteur CERFACS en lecture: 47
Rdmodfacs> Valeur propre du vecteur en lecture: 8.984
Rdmodfacs> Numero du vecteur CERFACS en lecture: 48
Rdmodfacs> Valeur propre du vecteur en lecture: 9.227
Rdmodfacs> Numero du vecteur CERFACS en lecture: 49
Rdmodfacs> Valeur propre du vecteur en lecture: 9.439
Rdmodfacs> Numero du vecteur CERFACS en lecture: 50
Rdmodfacs> Valeur propre du vecteur en lecture: 9.610
Rdmodfacs> Numero du vecteur CERFACS en lecture: 51
Rdmodfacs> Valeur propre du vecteur en lecture: 9.859
Rdmodfacs> Numero du vecteur CERFACS en lecture: 52
Rdmodfacs> Valeur propre du vecteur en lecture: 10.03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 53
Rdmodfacs> Valeur propre du vecteur en lecture: 10.23
Rdmodfacs> Numero du vecteur CERFACS en lecture: 54
Rdmodfacs> Valeur propre du vecteur en lecture: 10.52
Rdmodfacs> Numero du vecteur CERFACS en lecture: 55
Rdmodfacs> Valeur propre du vecteur en lecture: 10.73
Rdmodfacs> Numero du vecteur CERFACS en lecture: 56
Rdmodfacs> Valeur propre du vecteur en lecture: 10.84
Rdmodfacs> Numero du vecteur CERFACS en lecture: 57
Rdmodfacs> Valeur propre du vecteur en lecture: 11.37
Rdmodfacs> Numero du vecteur CERFACS en lecture: 58
Rdmodfacs> Valeur propre du vecteur en lecture: 11.40
Rdmodfacs> Numero du vecteur CERFACS en lecture: 59
Rdmodfacs> Valeur propre du vecteur en lecture: 11.50
Rdmodfacs> Numero du vecteur CERFACS en lecture: 60
Rdmodfacs> Valeur propre du vecteur en lecture: 11.79
Rdmodfacs> Numero du vecteur CERFACS en lecture: 61
Rdmodfacs> Valeur propre du vecteur en lecture: 11.86
Rdmodfacs> Numero du vecteur CERFACS en lecture: 62
Rdmodfacs> Valeur propre du vecteur en lecture: 12.08
Rdmodfacs> Numero du vecteur CERFACS en lecture: 63
Rdmodfacs> Valeur propre du vecteur en lecture: 12.31
Rdmodfacs> Numero du vecteur CERFACS en lecture: 64
Rdmodfacs> Valeur propre du vecteur en lecture: 12.67
Rdmodfacs> Numero du vecteur CERFACS en lecture: 65
Rdmodfacs> Valeur propre du vecteur en lecture: 13.17
Rdmodfacs> Numero du vecteur CERFACS en lecture: 66
Rdmodfacs> Valeur propre du vecteur en lecture: 13.20
Rdmodfacs> Numero du vecteur CERFACS en lecture: 67
Rdmodfacs> Valeur propre du vecteur en lecture: 13.73
Rdmodfacs> Numero du vecteur CERFACS en lecture: 68
Rdmodfacs> Valeur propre du vecteur en lecture: 14.03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 69
Rdmodfacs> Valeur propre du vecteur en lecture: 14.19
Rdmodfacs> Numero du vecteur CERFACS en lecture: 70
Rdmodfacs> Valeur propre du vecteur en lecture: 14.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 71
Rdmodfacs> Valeur propre du vecteur en lecture: 14.65
Rdmodfacs> Numero du vecteur CERFACS en lecture: 72
Rdmodfacs> Valeur propre du vecteur en lecture: 14.81
Rdmodfacs> Numero du vecteur CERFACS en lecture: 73
Rdmodfacs> Valeur propre du vecteur en lecture: 14.88
Rdmodfacs> Numero du vecteur CERFACS en lecture: 74
Rdmodfacs> Valeur propre du vecteur en lecture: 15.07
Rdmodfacs> Numero du vecteur CERFACS en lecture: 75
Rdmodfacs> Valeur propre du vecteur en lecture: 15.55
Rdmodfacs> Numero du vecteur CERFACS en lecture: 76
Rdmodfacs> Valeur propre du vecteur en lecture: 15.61
Rdmodfacs> Numero du vecteur CERFACS en lecture: 77
Rdmodfacs> Valeur propre du vecteur en lecture: 16.08
Rdmodfacs> Numero du vecteur CERFACS en lecture: 78
Rdmodfacs> Valeur propre du vecteur en lecture: 16.26
Rdmodfacs> Numero du vecteur CERFACS en lecture: 79
Rdmodfacs> Valeur propre du vecteur en lecture: 16.42
Rdmodfacs> Numero du vecteur CERFACS en lecture: 80
Rdmodfacs> Valeur propre du vecteur en lecture: 16.58
Rdmodfacs> Numero du vecteur CERFACS en lecture: 81
Rdmodfacs> Valeur propre du vecteur en lecture: 16.79
Rdmodfacs> Numero du vecteur CERFACS en lecture: 82
Rdmodfacs> Valeur propre du vecteur en lecture: 17.14
Rdmodfacs> Numero du vecteur CERFACS en lecture: 83
Rdmodfacs> Valeur propre du vecteur en lecture: 17.14
Rdmodfacs> Numero du vecteur CERFACS en lecture: 84
Rdmodfacs> Valeur propre du vecteur en lecture: 17.35
Rdmodfacs> Numero du vecteur CERFACS en lecture: 85
Rdmodfacs> Valeur propre du vecteur en lecture: 17.65
Rdmodfacs> Numero du vecteur CERFACS en lecture: 86
Rdmodfacs> Valeur propre du vecteur en lecture: 17.86
Rdmodfacs> Numero du vecteur CERFACS en lecture: 87
Rdmodfacs> Valeur propre du vecteur en lecture: 17.96
Rdmodfacs> Numero du vecteur CERFACS en lecture: 88
Rdmodfacs> Valeur propre du vecteur en lecture: 18.10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 89
Rdmodfacs> Valeur propre du vecteur en lecture: 18.27
Rdmodfacs> Numero du vecteur CERFACS en lecture: 90
Rdmodfacs> Valeur propre du vecteur en lecture: 18.72
Rdmodfacs> Numero du vecteur CERFACS en lecture: 91
Rdmodfacs> Valeur propre du vecteur en lecture: 19.13
Rdmodfacs> Numero du vecteur CERFACS en lecture: 92
Rdmodfacs> Valeur propre du vecteur en lecture: 19.14
Rdmodfacs> Numero du vecteur CERFACS en lecture: 93
Rdmodfacs> Valeur propre du vecteur en lecture: 19.19
Rdmodfacs> Numero du vecteur CERFACS en lecture: 94
Rdmodfacs> Valeur propre du vecteur en lecture: 19.44
Rdmodfacs> Numero du vecteur CERFACS en lecture: 95
Rdmodfacs> Valeur propre du vecteur en lecture: 19.73
Rdmodfacs> Numero du vecteur CERFACS en lecture: 96
Rdmodfacs> Valeur propre du vecteur en lecture: 19.85
Rdmodfacs> Numero du vecteur CERFACS en lecture: 97
Rdmodfacs> Valeur propre du vecteur en lecture: 19.89
Rdmodfacs> Numero du vecteur CERFACS en lecture: 98
Rdmodfacs> Valeur propre du vecteur en lecture: 20.21
Rdmodfacs> Numero du vecteur CERFACS en lecture: 99
Rdmodfacs> Valeur propre du vecteur en lecture: 20.32
Rdmodfacs> Numero du vecteur CERFACS en lecture: 100
Rdmodfacs> Valeur propre du vecteur en lecture: 20.65
Rdmodfacs> Numero du vecteur CERFACS en lecture: 101
Rdmodfacs> Valeur propre du vecteur en lecture: 20.89
Rdmodfacs> Numero du vecteur CERFACS en lecture: 102
Rdmodfacs> Valeur propre du vecteur en lecture: 21.16
Rdmodfacs> Numero du vecteur CERFACS en lecture: 103
Rdmodfacs> Valeur propre du vecteur en lecture: 21.30
Rdmodfacs> Numero du vecteur CERFACS en lecture: 104
Rdmodfacs> Valeur propre du vecteur en lecture: 21.71
Rdmodfacs> Numero du vecteur CERFACS en lecture: 105
Rdmodfacs> Valeur propre du vecteur en lecture: 21.78
Rdmodfacs> Numero du vecteur CERFACS en lecture: 106
Rdmodfacs> Valeur propre du vecteur en lecture: 21.98
%Rdmodfacs-Wn> More than 106 vectors in file.
Bfactors> 106 vectors, 594 coordinates in file.
Openam> file on opening on unit 12:
bfactors.pred
Bfactors> Best zero-eigenvalue found : 0.000000
Bfactors> 6 eigenvalues less than : 0.000000
Bfactors> Lowest non-zero eigenvalue : 0.512200
Bfactors> 100 eigenvectors will be considered.
Bfactors> Rotation-Tranlation modes are skipped.
Bfactors> Mass-weighted B-factors are computed.
(CHARMM units assumed for eigenvalues)
Bfactors> Correlation= 0.653 for 197 C-alpha atoms.
Bfactors> = 1.570 +/- 2.48
Bfactors> = 18.837 +/- 6.67
Bfactors> Shiftng-fct= 17.267
Bfactors> Scaling-fct= 2.687
Bfactors> Predicted, Scaled and Experimental B-factors are saved.
Bfactors> Normal end.
check_modes
getting mode 7
running: ../../bin/get_modes.sh 24041412001571065 7 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 7
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 8
running: ../../bin/get_modes.sh 24041412001571065 8 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 8
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 9
running: ../../bin/get_modes.sh 24041412001571065 9 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 9
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 10
running: ../../bin/get_modes.sh 24041412001571065 10 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 10
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 11
running: ../../bin/get_modes.sh 24041412001571065 11 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 11
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 12
running: ../../bin/get_modes.sh 24041412001571065 12 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 12
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 13
running: ../../bin/get_modes.sh 24041412001571065 13 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 13
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 14
running: ../../bin/get_modes.sh 24041412001571065 14 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 14
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 15
running: ../../bin/get_modes.sh 24041412001571065 15 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 15
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 16
running: ../../bin/get_modes.sh 24041412001571065 16 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 16
calculating perturbed structure for DQ=-100
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=-20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=0
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=20
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=40
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=60
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=80
24041412001571065.eigenfacs
24041412001571065.atom
calculating perturbed structure for DQ=100
24041412001571065.eigenfacs
24041412001571065.atom
making animated gifs
11 models are in 24041412001571065.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 24041412001571065.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
24041412001571065.10.pdb
24041412001571065.11.pdb
24041412001571065.12.pdb
24041412001571065.13.pdb
24041412001571065.14.pdb
24041412001571065.15.pdb
24041412001571065.16.pdb
24041412001571065.7.pdb
24041412001571065.8.pdb
24041412001571065.9.pdb
STDERR:
real 0m2.975s
user 0m2.963s
sys 0m0.012s
../../bin/check_modes: error while loading shared libraries: libgfortran.so.3: cannot open shared object file: No such file or directory
mv: cannot stat 'Chkmod.res': No such file or directory
cat: 24041412001571065.Chkmod.res: No such file or directory
pstopnm: Writing ppmraw format
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If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.
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