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CA strain for EXAMPLE3

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LEU 5VAL 6 0.0001
VAL 6VAL 7 -0.0602
VAL 7ALA 8 -0.0002
ALA 8THR 9 0.0318
THR 9ASP 10 0.0001
ASP 10THR 11 -0.1390
THR 11ALA 12 -0.0004
ALA 12PHE 13 -0.1576
PHE 13VAL 14 -0.0002
VAL 14PRO 15 0.2106
PRO 15PHE 16 -0.0001
PHE 16GLU 17 -0.0847
GLU 17PHE 18 0.0002
PHE 18LYS 19 -0.3719
LYS 19GLN 20 -0.0000
GLN 20GLY 21 -0.1420
GLY 21ASP 22 0.0001
ASP 22LEU 23 0.2647
LEU 23TYR 24 -0.0001
TYR 24VAL 25 0.0914
VAL 25GLY 26 0.0002
GLY 26PHE 27 0.1524
PHE 27ASP 28 -0.0001
ASP 28VAL 29 0.1456
VAL 29ASP 30 -0.0005
ASP 30LEU 31 0.3063
LEU 31TRP 32 0.0001
TRP 32ALA 33 -0.0528
ALA 33ALA 34 -0.0001
ALA 34ILE 35 0.0012
ILE 35ALA 36 -0.0001
ALA 36LYS 37 -0.0172
LYS 37GLU 38 0.0000
GLU 38LEU 39 -0.0531
LEU 39LYS 40 -0.0001
LYS 40LEU 41 -0.0142
LEU 41ASP 42 -0.0001
ASP 42TYR 43 0.1523
TYR 43GLU 44 0.0001
GLU 44LEU 45 0.2361
LEU 45LYS 46 -0.0000
LYS 46PRO 47 0.1740
PRO 47MET 48 -0.0002
MET 48ASP 49 -0.0336
ASP 49PHE 50 -0.0001
PHE 50SER 51 0.0707
SER 51GLY 52 0.0002
GLY 52ILE 53 0.0259
ILE 53ILE 54 0.0002
ILE 54PRO 55 0.0965
PRO 55ALA 56 0.0000
ALA 56LEU 57 -0.0006
LEU 57GLN 58 -0.0002
GLN 58THR 59 0.0184
THR 59LYS 60 0.0002
LYS 60ASN 61 0.0392
ASN 61VAL 62 -0.0001
VAL 62ASP 63 -0.0422
ASP 63LEU 64 -0.0001
LEU 64ALA 65 0.0044
ALA 65LEU 66 0.0002
LEU 66ALA 67 0.0018
ALA 67GLY 68 -0.0000
GLY 68ILE 69 -0.1213
ILE 69THR 70 -0.0001
THR 70ILE 71 -0.1028
ILE 71THR 72 0.0001
THR 72ASP 73 0.0308
ASP 73GLU 74 -0.0000
GLU 74ARG 75 -0.1433
ARG 75LYS 76 0.0002
LYS 76LYS 77 0.0366
LYS 77ALA 78 0.0001
ALA 78ILE 79 -0.0335
ILE 79ASP 80 0.0002
ASP 80PHE 81 -0.0091
PHE 81SER 82 -0.0003
SER 82ASP 83 -0.0038
ASP 83GLY 84 -0.0004
GLY 84TYR 85 -0.0007
TYR 85TYR 86 -0.0002
TYR 86LYS 87 -0.2447
LYS 87SER 88 -0.0002
SER 88GLY 89 -0.3522
GLY 89LEU 90 -0.0001
LEU 90LEU 91 -0.0411
LEU 91VAL 92 0.0002
VAL 92MET 93 0.0365
MET 93VAL 94 -0.0000
VAL 94LYS 95 -0.0119
LYS 95ALA 96 -0.0001
ALA 96ASN 97 -0.0016
ASN 97ASN 98 -0.0004
ASN 98ASN 99 0.0047
ASN 99ASP 100 0.0001
ASP 100VAL 101 -0.0038
VAL 101LYS 102 0.0005
LYS 102SER 103 0.0062
SER 103VAL 104 -0.0002
VAL 104LYS 105 0.0304
LYS 105ASP 106 -0.0000
ASP 106LEU 107 -0.0268
LEU 107ASP 108 0.0001
ASP 108GLY 109 -0.0115
GLY 109LYS 110 0.0002
LYS 110VAL 111 -0.0076
VAL 111VAL 112 -0.0003
VAL 112ALA 113 0.0288
ALA 113VAL 114 -0.0003
VAL 114LYS 115 0.0431
LYS 115SER 116 -0.0001
SER 116GLY 117 0.0312
GLY 117THR 118 -0.0002
THR 118GLY 119 -0.0004
GLY 119SER 120 -0.0000
SER 120VAL 121 -0.1216
VAL 121ASP 122 -0.0003
ASP 122TYR 123 -0.0037
TYR 123ALA 124 -0.0001
ALA 124LYS 125 -0.0723
LYS 125ALA 126 0.0005
ALA 126ASN 127 0.0219
ASN 127ILE 128 -0.0003
ILE 128LYS 129 -0.1138
LYS 129THR 130 -0.0002
THR 130LYS 131 -0.0290
LYS 131ASP 132 -0.0000
ASP 132LEU 133 -0.0364
LEU 133ARG 134 -0.0000
ARG 134GLN 135 0.0255
GLN 135PHE 136 -0.0002
PHE 136PRO 137 0.0449
PRO 137ASN 138 0.0001
ASN 138ILE 139 -0.0891
ILE 139ASP 140 0.0004
ASP 140ASN 141 -0.0517
ASN 141ALA 142 0.0001
ALA 142TYR 143 -0.0492
TYR 143MET 144 0.0002
MET 144GLU 145 -0.0517
GLU 145LEU 146 0.0005
LEU 146GLY 147 0.0130
GLY 147THR 148 -0.0003
THR 148ASN 149 -0.0112
ASN 149ARG 150 -0.0001
ARG 150ALA 151 -0.0096
ALA 151ASP 152 -0.0001
ASP 152ALA 153 -0.0739
ALA 153VAL 154 -0.0001
VAL 154LEU 155 -0.0244
LEU 155HIS 156 -0.0002
HIS 156ASP 157 -0.2783
ASP 157THR 158 0.0001
THR 158PRO 159 -0.0579
PRO 159ASN 160 0.0004
ASN 160ILE 161 -0.0207
ILE 161LEU 162 -0.0000
LEU 162TYR 163 0.0386
TYR 163PHE 164 -0.0001
PHE 164ILE 165 0.0093
ILE 165LYS 166 -0.0001
LYS 166THR 167 -0.0935
THR 167ALA 168 0.0000
ALA 168GLY 169 0.0250
GLY 169ASN 170 -0.0000
ASN 170GLY 171 0.0727
GLY 171GLN 172 -0.0002
GLN 172PHE 173 -0.0143
PHE 173LYS 174 -0.0000
LYS 174ALA 175 0.0208
ALA 175VAL 176 -0.0003
VAL 176GLY 177 0.0329
GLY 177ASP 178 0.0003
ASP 178SER 179 0.0567
SER 179LEU 180 0.0000
LEU 180GLU 181 0.0909
GLU 181ALA 182 -0.0004
ALA 182GLN 183 0.0103
GLN 183GLN 184 0.0000
GLN 184TYR 185 -0.1331
TYR 185GLY 186 0.0002
GLY 186ILE 187 -0.0754
ILE 187ALA 188 -0.0001
ALA 188PHE 189 0.0268
PHE 189PRO 190 0.0003
PRO 190LYS 191 0.0296
LYS 191GLY 192 0.0002
GLY 192SER 193 0.0113
SER 193ASP 194 -0.0000
ASP 194GLU 195 -0.0053
GLU 195LEU 196 0.0001
LEU 196ARG 197 -0.0212
ARG 197ASP 198 -0.0001
ASP 198LYS 199 0.0503
LYS 199VAL 200 0.0001
VAL 200ASN 201 0.0215
ASN 201GLY 202 -0.0002
GLY 202ALA 203 0.0247
ALA 203LEU 204 -0.0002
LEU 204LYS 205 0.0261
LYS 205THR 206 0.0002
THR 206LEU 207 0.0487
LEU 207ARG 208 -0.0002
ARG 208GLU 209 -0.1107
GLU 209ASN 210 0.0002
ASN 210GLY 211 -0.0906
GLY 211THR 212 0.0001
THR 212TYR 213 -0.0715
TYR 213ASN 214 0.0003
ASN 214GLU 215 0.1284
GLU 215ILE 216 0.0003
ILE 216TYR 217 -0.0535
TYR 217LYS 218 -0.0001
LYS 218LYS 219 0.1101
LYS 219TRP 220 0.0003
TRP 220PHE 221 -0.0922
PHE 221GLY 222 -0.0003
GLY 222THR 223 -0.0230
THR 223GLU 224 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.