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CA strain for EXAMPLE2

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ILE 2 0.0001
ILE 2GLU 3 0.0339
GLU 3GLU 4 0.0002
GLU 4GLY 5 -0.0388
GLY 5LYS 6 0.0001
LYS 6LEU 7 -0.0056
LEU 7VAL 8 0.0001
VAL 8ILE 9 0.0111
ILE 9TRP 10 -0.0001
TRP 10ILE 11 0.1489
ILE 11ASN 12 -0.0002
ASN 12GLY 13 -0.0192
GLY 13ASP 14 0.0002
ASP 14LYS 15 -0.0402
LYS 15GLY 16 -0.0000
GLY 16TYR 17 0.0442
TYR 17ASN 18 0.0001
ASN 18GLY 19 -0.0060
GLY 19LEU 20 0.0002
LEU 20ALA 21 -0.0031
ALA 21GLU 22 0.0000
GLU 22VAL 23 -0.0044
VAL 23GLY 24 -0.0000
GLY 24LYS 25 -0.0176
LYS 25LYS 26 -0.0003
LYS 26PHE 27 0.0011
PHE 27GLU 28 0.0003
GLU 28LYS 29 -0.0148
LYS 29ASP 30 0.0001
ASP 30THR 31 -0.0010
THR 31GLY 32 -0.0001
GLY 32ILE 33 -0.0109
ILE 33LYS 34 0.0002
LYS 34VAL 35 0.0018
VAL 35THR 36 -0.0000
THR 36VAL 37 0.0415
VAL 37GLU 38 0.0001
GLU 38HIS 39 -0.0053
HIS 39PRO 40 -0.0001
PRO 40ASP 41 -0.0725
ASP 41LYS 42 -0.0002
LYS 42LEU 43 0.0393
LEU 43GLU 44 -0.0001
GLU 44GLU 45 0.0307
GLU 45LYS 46 -0.0001
LYS 46PHE 47 -0.0102
PHE 47PRO 48 0.0001
PRO 48GLN 49 -0.0322
GLN 49VAL 50 -0.0002
VAL 50ALA 51 -0.0041
ALA 51ALA 52 -0.0002
ALA 52THR 53 -0.0310
THR 53GLY 54 0.0002
GLY 54ASP 55 0.0285
ASP 55GLY 56 0.0004
GLY 56PRO 57 0.0233
PRO 57ASP 58 -0.0001
ASP 58ILE 59 0.0014
ILE 59ILE 60 0.0003
ILE 60PHE 61 0.0171
PHE 61TRP 62 0.0001
TRP 62ALA 63 0.0124
ALA 63HIS 64 -0.0002
HIS 64ASP 65 0.0189
ASP 65ARG 66 0.0003
ARG 66PHE 67 0.0249
PHE 67GLY 68 -0.0000
GLY 68GLY 69 -0.0057
GLY 69TYR 70 -0.0001
TYR 70ALA 71 0.0264
ALA 71GLN 72 0.0001
GLN 72SER 73 -0.0407
SER 73GLY 74 -0.0000
GLY 74LEU 75 0.0122
LEU 75LEU 76 0.0000
LEU 76ALA 77 -0.0114
ALA 77GLU 78 -0.0001
GLU 78ILE 79 -0.0274
ILE 79THR 80 -0.0000
THR 80PRO 81 -0.0275
PRO 81ASP 82 -0.0001
ASP 82LYS 83 0.0026
LYS 83ALA 84 -0.0001
ALA 84PHE 85 -0.0125
PHE 85GLN 86 0.0003
GLN 86ASP 87 -0.0086
ASP 87LYS 88 -0.0002
LYS 88LEU 89 0.0174
LEU 89TYR 90 -0.0001
TYR 90PRO 91 -0.0324
PRO 91PHE 92 0.0002
PHE 92THR 93 -0.0060
THR 93TRP 94 -0.0002
TRP 94ASP 95 0.0531
ASP 95ALA 96 -0.0001
ALA 96VAL 97 -0.0087
VAL 97ARG 98 -0.0004
ARG 98TYR 99 0.0049
TYR 99ASN 100 -0.0000
ASN 100GLY 101 0.0191
GLY 101LYS 102 -0.0000
LYS 102LEU 103 0.0028
LEU 103ILE 104 -0.0000
ILE 104ALA 105 0.0084
ALA 105TYR 106 -0.0002
TYR 106PRO 107 -0.0154
PRO 107ILE 108 -0.0001
ILE 108ALA 109 -0.0135
ALA 109VAL 110 0.0003
VAL 110GLU 111 -0.0326
GLU 111ALA 112 0.0000
ALA 112LEU 113 -0.0123
LEU 113SER 114 0.0001
SER 114LEU 115 -0.0226
LEU 115ILE 116 0.0001
ILE 116TYR 117 0.0168
TYR 117ASN 118 -0.0001
ASN 118LYS 119 0.0039
LYS 119ASP 120 -0.0000
ASP 120LEU 121 0.0112
LEU 121LEU 122 0.0003
LEU 122PRO 123 0.0116
PRO 123ASN 124 0.0003
ASN 124PRO 125 0.0030
PRO 125PRO 126 0.0001
PRO 126LYS 127 -0.0052
LYS 127THR 128 0.0003
THR 128TRP 129 0.0261
TRP 129GLU 130 -0.0002
GLU 130GLU 131 -0.0358
GLU 131ILE 132 -0.0002
ILE 132PRO 133 0.0121
PRO 133ALA 134 -0.0002
ALA 134LEU 135 0.0405
LEU 135ASP 136 0.0002
ASP 136LYS 137 0.0038
LYS 137GLU 138 0.0001
GLU 138LEU 139 0.0192
LEU 139LYS 140 0.0003
LYS 140ALA 141 0.0285
ALA 141LYS 142 -0.0002
LYS 142GLY 143 0.0087
GLY 143LYS 144 0.0002
LYS 144SER 145 0.0171
SER 145ALA 146 0.0004
ALA 146LEU 147 0.0389
LEU 147MET 148 -0.0001
MET 148PHE 149 0.0882
PHE 149ASN 150 0.0002
ASN 150LEU 151 -0.0802
LEU 151GLN 152 -0.0000
GLN 152GLU 153 0.0971
GLU 153PRO 154 0.0001
PRO 154TYR 155 -0.1103
TYR 155PHE 156 -0.0003
PHE 156THR 157 -0.0676
THR 157TRP 158 0.0001
TRP 158PRO 159 -0.0162
PRO 159LEU 160 -0.0001
LEU 160ILE 161 -0.0053
ILE 161ALA 162 -0.0001
ALA 162ALA 163 -0.0475
ALA 163ASP 164 0.0002
ASP 164GLY 165 -0.1247
GLY 165GLY 166 -0.0004
GLY 166TYR 167 -0.0779
TYR 167ALA 168 -0.0001
ALA 168PHE 169 -0.0270
PHE 169LYS 170 -0.0001
LYS 170TYR 171 -0.0359
TYR 171GLU 172 -0.0005
GLU 172ASN 173 -0.0234
ASN 173GLY 174 0.0000
GLY 174LYS 175 0.0129
LYS 175TYR 176 -0.0004
TYR 176ASP 177 0.0804
ASP 177ILE 178 0.0002
ILE 178LYS 179 -0.0144
LYS 179ASP 180 -0.0000
ASP 180VAL 181 -0.0290
VAL 181GLY 182 0.0002
GLY 182VAL 183 -0.0505
VAL 183ASP 184 -0.0000
ASP 184ASN 185 0.0224
ASN 185ALA 186 0.0002
ALA 186GLY 187 0.0334
GLY 187ALA 188 -0.0003
ALA 188LYS 189 0.0121
LYS 189ALA 190 -0.0000
ALA 190GLY 191 0.0153
GLY 191LEU 192 -0.0001
LEU 192THR 193 0.0136
THR 193PHE 194 -0.0000
PHE 194LEU 195 -0.0080
LEU 195VAL 196 -0.0001
VAL 196ASP 197 0.0381
ASP 197LEU 198 -0.0002
LEU 198ILE 199 -0.0025
ILE 199LYS 200 -0.0000
LYS 200ASN 201 0.0467
ASN 201LYS 202 0.0002
LYS 202HIS 203 -0.0047
HIS 203MET 204 -0.0001
MET 204ASN 205 0.0366
ASN 205ALA 206 0.0000
ALA 206ASP 207 -0.1021
ASP 207THR 208 -0.0002
THR 208ASP 209 -0.0925
ASP 209TYR 210 -0.0001
TYR 210SER 211 0.0277
SER 211ILE 212 0.0000
ILE 212ALA 213 0.0090
ALA 213GLU 214 -0.0001
GLU 214ALA 215 0.0374
ALA 215ALA 216 0.0001
ALA 216PHE 217 -0.0271
PHE 217ASN 218 -0.0001
ASN 218LYS 219 0.0001
LYS 219GLY 220 -0.0000
GLY 220GLU 221 -0.0052
GLU 221THR 222 -0.0003
THR 222ALA 223 -0.0105
ALA 223MET 224 0.0001
MET 224THR 225 0.0509
THR 225ILE 226 -0.0002
ILE 226ASN 227 0.0064
ASN 227GLY 228 0.0001
GLY 228PRO 229 -0.0344
PRO 229TRP 230 0.0000
TRP 230ALA 231 0.0614
ALA 231TRP 232 0.0004
TRP 232SER 233 0.0052
SER 233ASN 234 -0.0004
ASN 234ILE 235 0.0847
ILE 235ASP 236 0.0006
ASP 236THR 237 -0.0413
THR 237SER 238 0.0001
SER 238LYS 239 0.0227
LYS 239VAL 240 0.0001
VAL 240ASN 241 -0.0044
ASN 241TYR 242 0.0002
TYR 242GLY 243 -0.0636
GLY 243VAL 244 -0.0001
VAL 244THR 245 0.0586
THR 245VAL 246 0.0003
VAL 246LEU 247 0.0090
LEU 247PRO 248 0.0003
PRO 248THR 249 0.0598
THR 249PHE 250 0.0001
PHE 250LYS 251 0.0126
LYS 251GLY 252 -0.0001
GLY 252GLN 253 -0.0170
GLN 253PRO 254 -0.0001
PRO 254SER 255 -0.0016
SER 255LYS 256 0.0001
LYS 256PRO 257 -0.0160
PRO 257PHE 258 -0.0003
PHE 258VAL 259 0.0467
VAL 259GLY 260 0.0001
GLY 260VAL 261 0.0252
VAL 261LEU 262 -0.0001
LEU 262SER 263 0.0042
SER 263ALA 264 -0.0001
ALA 264GLY 265 -0.0040
GLY 265ILE 266 0.0003
ILE 266ASN 267 -0.0241
ASN 267ALA 268 -0.0000
ALA 268ALA 269 -0.0299
ALA 269SER 270 -0.0000
SER 270PRO 271 0.0053
PRO 271ASN 272 0.0001
ASN 272LYS 273 0.0003
LYS 273GLU 274 -0.0003
GLU 274LEU 275 0.0171
LEU 275ALA 276 -0.0001
ALA 276LYS 277 -0.0144
LYS 277GLU 278 -0.0001
GLU 278PHE 279 0.0068
PHE 279LEU 280 -0.0002
LEU 280GLU 281 -0.0089
GLU 281ASN 282 -0.0003
ASN 282TYR 283 0.0257
TYR 283LEU 284 -0.0000
LEU 284LEU 285 0.0139
LEU 285THR 286 -0.0000
THR 286ASP 287 -0.0250
ASP 287GLU 288 0.0003
GLU 288GLY 289 0.0072
GLY 289LEU 290 0.0000
LEU 290GLU 291 -0.0018
GLU 291ALA 292 0.0003
ALA 292VAL 293 0.0008
VAL 293ASN 294 -0.0001
ASN 294LYS 295 0.0464
LYS 295ASP 296 -0.0002
ASP 296LYS 297 -0.0036
LYS 297PRO 298 0.0003
PRO 298LEU 299 -0.0071
LEU 299GLY 300 -0.0002
GLY 300ALA 301 -0.0653
ALA 301VAL 302 -0.0005
VAL 302ALA 303 -0.0526
ALA 303LEU 304 -0.0004
LEU 304LYS 305 0.0123
LYS 305SER 306 0.0000
SER 306TYR 307 -0.0036
TYR 307GLU 308 -0.0001
GLU 308GLU 309 0.0645
GLU 309GLU 310 -0.0001
GLU 310LEU 311 -0.0003
LEU 311ALA 312 -0.0002
ALA 312LYS 313 0.0369
LYS 313ASP 314 -0.0002
ASP 314PRO 315 -0.0235
PRO 315ARG 316 -0.0002
ARG 316ILE 317 -0.1128
ILE 317ALA 318 0.0001
ALA 318ALA 319 0.0187
ALA 319THR 320 0.0003
THR 320MET 321 -0.0479
MET 321GLU 322 -0.0001
GLU 322ASN 323 0.0430
ASN 323ALA 324 -0.0001
ALA 324GLN 325 -0.0257
GLN 325LYS 326 0.0000
LYS 326GLY 327 -0.0804
GLY 327GLU 328 -0.0003
GLU 328ILE 329 -0.0714
ILE 329MET 330 -0.0001
MET 330PRO 331 -0.0677
PRO 331ASN 332 0.0001
ASN 332ILE 333 0.0530
ILE 333PRO 334 -0.0003
PRO 334GLN 335 0.0633
GLN 335MET 336 0.0000
MET 336SER 337 -0.0055
SER 337ALA 338 -0.0002
ALA 338PHE 339 -0.0553
PHE 339TRP 340 0.0002
TRP 340TYR 341 -0.0550
TYR 341ALA 342 -0.0002
ALA 342VAL 343 -0.0058
VAL 343ARG 344 -0.0001
ARG 344THR 345 -0.0383
THR 345ALA 346 -0.0002
ALA 346VAL 347 -0.0292
VAL 347ILE 348 -0.0002
ILE 348ASN 349 -0.0835
ASN 349ALA 350 -0.0001
ALA 350ALA 351 -0.0636
ALA 351SER 352 0.0000
SER 352GLY 353 -0.0523
GLY 353ARG 354 0.0002
ARG 354GLN 355 0.0062
GLN 355THR 356 -0.0005
THR 356VAL 357 0.0323
VAL 357ASP 358 -0.0001
ASP 358GLU 359 0.0246
GLU 359ALA 360 -0.0003
ALA 360LEU 361 -0.0001
LEU 361LYS 362 0.0002
LYS 362ASP 363 0.0040
ASP 363ALA 364 -0.0001
ALA 364GLN 365 -0.0191
GLN 365THR 366 0.0001
THR 366ARG 367 -0.0340
ARG 367ILE 368 -0.0001
ILE 368THR 369 -0.0284
THR 369LYS 370 -0.0001

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.