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CA strain for EXAMPLE2

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ILE 2 0.0003
ILE 2GLU 3 0.0029
GLU 3GLU 4 -0.0001
GLU 4GLY 5 0.0162
GLY 5LYS 6 -0.0000
LYS 6LEU 7 -0.0134
LEU 7VAL 8 -0.0005
VAL 8ILE 9 -0.0388
ILE 9TRP 10 0.0003
TRP 10ILE 11 -0.0785
ILE 11ASN 12 0.0001
ASN 12GLY 13 0.0573
GLY 13ASP 14 -0.0001
ASP 14LYS 15 -0.1124
LYS 15GLY 16 0.0000
GLY 16TYR 17 -0.0194
TYR 17ASN 18 0.0001
ASN 18GLY 19 0.0399
GLY 19LEU 20 -0.0003
LEU 20ALA 21 0.0071
ALA 21GLU 22 -0.0001
GLU 22VAL 23 -0.0284
VAL 23GLY 24 0.0000
GLY 24LYS 25 0.0276
LYS 25LYS 26 -0.0002
LYS 26PHE 27 0.0019
PHE 27GLU 28 -0.0001
GLU 28LYS 29 0.0058
LYS 29ASP 30 -0.0001
ASP 30THR 31 -0.0003
THR 31GLY 32 -0.0001
GLY 32ILE 33 -0.0131
ILE 33LYS 34 0.0000
LYS 34VAL 35 -0.0325
VAL 35THR 36 0.0003
THR 36VAL 37 -0.0861
VAL 37GLU 38 0.0001
GLU 38HIS 39 -0.0730
HIS 39PRO 40 0.0001
PRO 40ASP 41 -0.0291
ASP 41LYS 42 -0.0002
LYS 42LEU 43 0.0861
LEU 43GLU 44 0.0004
GLU 44GLU 45 0.0122
GLU 45LYS 46 0.0001
LYS 46PHE 47 -0.0113
PHE 47PRO 48 -0.0003
PRO 48GLN 49 0.0036
GLN 49VAL 50 0.0002
VAL 50ALA 51 0.0021
ALA 51ALA 52 0.0003
ALA 52THR 53 0.0099
THR 53GLY 54 -0.0003
GLY 54ASP 55 0.0069
ASP 55GLY 56 0.0001
GLY 56PRO 57 0.0149
PRO 57ASP 58 -0.0002
ASP 58ILE 59 -0.0029
ILE 59ILE 60 -0.0003
ILE 60PHE 61 -0.0226
PHE 61TRP 62 -0.0002
TRP 62ALA 63 0.0150
ALA 63HIS 64 0.0001
HIS 64ASP 65 -0.0308
ASP 65ARG 66 -0.0002
ARG 66PHE 67 -0.1683
PHE 67GLY 68 -0.0001
GLY 68GLY 69 0.0046
GLY 69TYR 70 -0.0001
TYR 70ALA 71 -0.0113
ALA 71GLN 72 -0.0002
GLN 72SER 73 0.0151
SER 73GLY 74 0.0002
GLY 74LEU 75 0.0049
LEU 75LEU 76 -0.0004
LEU 76ALA 77 -0.0279
ALA 77GLU 78 0.0002
GLU 78ILE 79 -0.0128
ILE 79THR 80 0.0002
THR 80PRO 81 -0.0009
PRO 81ASP 82 0.0001
ASP 82LYS 83 -0.0148
LYS 83ALA 84 0.0004
ALA 84PHE 85 -0.0347
PHE 85GLN 86 -0.0003
GLN 86ASP 87 -0.0146
ASP 87LYS 88 0.0000
LYS 88LEU 89 0.0217
LEU 89TYR 90 -0.0001
TYR 90PRO 91 -0.0715
PRO 91PHE 92 0.0003
PHE 92THR 93 0.0089
THR 93TRP 94 -0.0002
TRP 94ASP 95 0.0268
ASP 95ALA 96 0.0000
ALA 96VAL 97 0.0780
VAL 97ARG 98 -0.0000
ARG 98TYR 99 -0.0606
TYR 99ASN 100 0.0002
ASN 100GLY 101 -0.0040
GLY 101LYS 102 -0.0000
LYS 102LEU 103 -0.0208
LEU 103ILE 104 -0.0001
ILE 104ALA 105 -0.0026
ALA 105TYR 106 0.0003
TYR 106PRO 107 0.0291
PRO 107ILE 108 0.0002
ILE 108ALA 109 0.0799
ALA 109VAL 110 -0.0002
VAL 110GLU 111 0.0772
GLU 111ALA 112 0.0000
ALA 112LEU 113 0.0839
LEU 113SER 114 -0.0003
SER 114LEU 115 0.0292
LEU 115ILE 116 -0.0000
ILE 116TYR 117 -0.0262
TYR 117ASN 118 -0.0002
ASN 118LYS 119 0.0011
LYS 119ASP 120 -0.0001
ASP 120LEU 121 0.0062
LEU 121LEU 122 0.0001
LEU 122PRO 123 0.0181
PRO 123ASN 124 0.0001
ASN 124PRO 125 -0.0155
PRO 125PRO 126 -0.0000
PRO 126LYS 127 -0.0279
LYS 127THR 128 0.0002
THR 128TRP 129 -0.0224
TRP 129GLU 130 0.0000
GLU 130GLU 131 -0.0113
GLU 131ILE 132 -0.0003
ILE 132PRO 133 0.0201
PRO 133ALA 134 0.0002
ALA 134LEU 135 -0.0058
LEU 135ASP 136 0.0001
ASP 136LYS 137 -0.0040
LYS 137GLU 138 -0.0003
GLU 138LEU 139 -0.0140
LEU 139LYS 140 -0.0002
LYS 140ALA 141 -0.0004
ALA 141LYS 142 0.0000
LYS 142GLY 143 -0.0172
GLY 143LYS 144 -0.0001
LYS 144SER 145 0.0204
SER 145ALA 146 -0.0003
ALA 146LEU 147 -0.0194
LEU 147MET 148 -0.0005
MET 148PHE 149 -0.0204
PHE 149ASN 150 -0.0002
ASN 150LEU 151 0.0038
LEU 151GLN 152 0.0000
GLN 152GLU 153 -0.0702
GLU 153PRO 154 -0.0001
PRO 154TYR 155 -0.0103
TYR 155PHE 156 0.0006
PHE 156THR 157 -0.0584
THR 157TRP 158 -0.0001
TRP 158PRO 159 -0.0044
PRO 159LEU 160 0.0001
LEU 160ILE 161 -0.0077
ILE 161ALA 162 -0.0001
ALA 162ALA 163 -0.0202
ALA 163ASP 164 -0.0002
ASP 164GLY 165 -0.0559
GLY 165GLY 166 -0.0000
GLY 166TYR 167 -0.0112
TYR 167ALA 168 -0.0006
ALA 168PHE 169 -0.0422
PHE 169LYS 170 0.0001
LYS 170TYR 171 -0.0238
TYR 171GLU 172 -0.0003
GLU 172ASN 173 -0.0239
ASN 173GLY 174 0.0002
GLY 174LYS 175 0.0341
LYS 175TYR 176 -0.0003
TYR 176ASP 177 -0.0080
ASP 177ILE 178 -0.0004
ILE 178LYS 179 0.0077
LYS 179ASP 180 0.0000
ASP 180VAL 181 -0.0094
VAL 181GLY 182 0.0002
GLY 182VAL 183 0.0005
VAL 183ASP 184 0.0000
ASP 184ASN 185 -0.0199
ASN 185ALA 186 0.0001
ALA 186GLY 187 -0.0013
GLY 187ALA 188 -0.0001
ALA 188LYS 189 0.0201
LYS 189ALA 190 -0.0001
ALA 190GLY 191 0.0026
GLY 191LEU 192 0.0000
LEU 192THR 193 -0.0067
THR 193PHE 194 -0.0001
PHE 194LEU 195 -0.0195
LEU 195VAL 196 -0.0004
VAL 196ASP 197 -0.0173
ASP 197LEU 198 -0.0002
LEU 198ILE 199 0.0133
ILE 199LYS 200 0.0000
LYS 200ASN 201 -0.0099
ASN 201LYS 202 0.0001
LYS 202HIS 203 0.0031
HIS 203MET 204 0.0003
MET 204ASN 205 0.0183
ASN 205ALA 206 0.0002
ALA 206ASP 207 -0.0135
ASP 207THR 208 0.0000
THR 208ASP 209 -0.1170
ASP 209TYR 210 0.0000
TYR 210SER 211 -0.0067
SER 211ILE 212 -0.0002
ILE 212ALA 213 0.0170
ALA 213GLU 214 -0.0002
GLU 214ALA 215 -0.0459
ALA 215ALA 216 -0.0003
ALA 216PHE 217 0.0317
PHE 217ASN 218 -0.0000
ASN 218LYS 219 -0.0701
LYS 219GLY 220 -0.0002
GLY 220GLU 221 -0.0076
GLU 221THR 222 0.0001
THR 222ALA 223 0.0141
ALA 223MET 224 0.0003
MET 224THR 225 -0.0487
THR 225ILE 226 0.0001
ILE 226ASN 227 -0.1153
ASN 227GLY 228 0.0002
GLY 228PRO 229 -0.0076
PRO 229TRP 230 0.0000
TRP 230ALA 231 -0.0073
ALA 231TRP 232 0.0001
TRP 232SER 233 -0.0378
SER 233ASN 234 0.0003
ASN 234ILE 235 -0.0552
ILE 235ASP 236 -0.0000
ASP 236THR 237 -0.0150
THR 237SER 238 0.0000
SER 238LYS 239 -0.0113
LYS 239VAL 240 -0.0002
VAL 240ASN 241 0.0000
ASN 241TYR 242 0.0003
TYR 242GLY 243 0.0026
GLY 243VAL 244 0.0001
VAL 244THR 245 -0.0343
THR 245VAL 246 -0.0001
VAL 246LEU 247 0.0846
LEU 247PRO 248 -0.0002
PRO 248THR 249 -0.0363
THR 249PHE 250 0.0004
PHE 250LYS 251 -0.0103
LYS 251GLY 252 0.0003
GLY 252GLN 253 0.0247
GLN 253PRO 254 -0.0001
PRO 254SER 255 -0.0180
SER 255LYS 256 -0.0001
LYS 256PRO 257 0.0095
PRO 257PHE 258 -0.0000
PHE 258VAL 259 0.0928
VAL 259GLY 260 0.0000
GLY 260VAL 261 0.0270
VAL 261LEU 262 -0.0000
LEU 262SER 263 0.0060
SER 263ALA 264 -0.0002
ALA 264GLY 265 0.0171
GLY 265ILE 266 0.0002
ILE 266ASN 267 0.0171
ASN 267ALA 268 -0.0004
ALA 268ALA 269 0.0144
ALA 269SER 270 -0.0003
SER 270PRO 271 -0.0087
PRO 271ASN 272 -0.0002
ASN 272LYS 273 0.0250
LYS 273GLU 274 0.0001
GLU 274LEU 275 -0.0088
LEU 275ALA 276 -0.0001
ALA 276LYS 277 0.0029
LYS 277GLU 278 -0.0001
GLU 278PHE 279 -0.0372
PHE 279LEU 280 -0.0000
LEU 280GLU 281 -0.0141
GLU 281ASN 282 0.0002
ASN 282TYR 283 -0.0280
TYR 283LEU 284 0.0002
LEU 284LEU 285 0.0350
LEU 285THR 286 0.0000
THR 286ASP 287 0.0644
ASP 287GLU 288 0.0000
GLU 288GLY 289 0.0233
GLY 289LEU 290 -0.0001
LEU 290GLU 291 -0.0154
GLU 291ALA 292 -0.0005
ALA 292VAL 293 0.0085
VAL 293ASN 294 -0.0003
ASN 294LYS 295 0.0204
LYS 295ASP 296 -0.0003
ASP 296LYS 297 -0.0300
LYS 297PRO 298 -0.0002
PRO 298LEU 299 -0.0349
LEU 299GLY 300 -0.0001
GLY 300ALA 301 0.0168
ALA 301VAL 302 -0.0004
VAL 302ALA 303 0.0002
ALA 303LEU 304 -0.0001
LEU 304LYS 305 0.0154
LYS 305SER 306 -0.0000
SER 306TYR 307 -0.0537
TYR 307GLU 308 -0.0002
GLU 308GLU 309 -0.0085
GLU 309GLU 310 -0.0003
GLU 310LEU 311 0.0137
LEU 311ALA 312 0.0002
ALA 312LYS 313 0.0098
LYS 313ASP 314 -0.0000
ASP 314PRO 315 0.0903
PRO 315ARG 316 -0.0001
ARG 316ILE 317 0.0618
ILE 317ALA 318 0.0003
ALA 318ALA 319 0.1684
ALA 319THR 320 -0.0000
THR 320MET 321 -0.0392
MET 321GLU 322 0.0005
GLU 322ASN 323 0.0151
ASN 323ALA 324 0.0003
ALA 324GLN 325 -0.0089
GLN 325LYS 326 -0.0002
LYS 326GLY 327 -0.0032
GLY 327GLU 328 -0.0001
GLU 328ILE 329 0.2397
ILE 329MET 330 0.0003
MET 330PRO 331 0.0427
PRO 331ASN 332 -0.0002
ASN 332ILE 333 0.0105
ILE 333PRO 334 0.0002
PRO 334GLN 335 -0.0550
GLN 335MET 336 0.0004
MET 336SER 337 0.0138
SER 337ALA 338 -0.0004
ALA 338PHE 339 -0.0083
PHE 339TRP 340 -0.0000
TRP 340TYR 341 0.0097
TYR 341ALA 342 -0.0001
ALA 342VAL 343 0.0186
VAL 343ARG 344 0.0001
ARG 344THR 345 -0.0256
THR 345ALA 346 -0.0001
ALA 346VAL 347 0.0336
VAL 347ILE 348 -0.0004
ILE 348ASN 349 0.0003
ASN 349ALA 350 0.0005
ALA 350ALA 351 0.0205
ALA 351SER 352 0.0001
SER 352GLY 353 0.0023
GLY 353ARG 354 -0.0004
ARG 354GLN 355 0.0280
GLN 355THR 356 0.0001
THR 356VAL 357 0.0302
VAL 357ASP 358 -0.0004
ASP 358GLU 359 0.0072
GLU 359ALA 360 -0.0002
ALA 360LEU 361 0.0195
LEU 361LYS 362 -0.0004
LYS 362ASP 363 -0.0143
ASP 363ALA 364 0.0002
ALA 364GLN 365 0.0118
GLN 365THR 366 0.0004
THR 366ARG 367 -0.0146
ARG 367ILE 368 -0.0003
ILE 368THR 369 0.0058
THR 369LYS 370 -0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.