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CA strain for EXAMPLE2

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ILE 2 0.0002
ILE 2GLU 3 -0.0463
GLU 3GLU 4 -0.0001
GLU 4GLY 5 0.0567
GLY 5LYS 6 0.0003
LYS 6LEU 7 0.0159
LEU 7VAL 8 0.0003
VAL 8ILE 9 -0.0041
ILE 9TRP 10 -0.0000
TRP 10ILE 11 -0.1802
ILE 11ASN 12 0.0002
ASN 12GLY 13 0.0606
GLY 13ASP 14 0.0003
ASP 14LYS 15 0.1397
LYS 15GLY 16 0.0000
GLY 16TYR 17 -0.0368
TYR 17ASN 18 0.0001
ASN 18GLY 19 -0.0502
GLY 19LEU 20 -0.0000
LEU 20ALA 21 0.0371
ALA 21GLU 22 -0.0000
GLU 22VAL 23 -0.0131
VAL 23GLY 24 0.0001
GLY 24LYS 25 0.0080
LYS 25LYS 26 0.0001
LYS 26PHE 27 -0.0080
PHE 27GLU 28 -0.0001
GLU 28LYS 29 -0.0071
LYS 29ASP 30 -0.0001
ASP 30THR 31 -0.0221
THR 31GLY 32 0.0001
GLY 32ILE 33 0.0023
ILE 33LYS 34 -0.0001
LYS 34VAL 35 0.0109
VAL 35THR 36 -0.0003
THR 36VAL 37 -0.0366
VAL 37GLU 38 -0.0000
GLU 38HIS 39 -0.0265
HIS 39PRO 40 -0.0003
PRO 40ASP 41 0.0289
ASP 41LYS 42 -0.0002
LYS 42LEU 43 -0.0080
LEU 43GLU 44 0.0002
GLU 44GLU 45 -0.0612
GLU 45LYS 46 0.0005
LYS 46PHE 47 0.0313
PHE 47PRO 48 0.0001
PRO 48GLN 49 0.0224
GLN 49VAL 50 -0.0000
VAL 50ALA 51 0.0157
ALA 51ALA 52 -0.0000
ALA 52THR 53 0.0361
THR 53GLY 54 -0.0003
GLY 54ASP 55 -0.0336
ASP 55GLY 56 -0.0001
GLY 56PRO 57 -0.0379
PRO 57ASP 58 0.0003
ASP 58ILE 59 0.0041
ILE 59ILE 60 0.0002
ILE 60PHE 61 -0.0591
PHE 61TRP 62 0.0003
TRP 62ALA 63 0.0946
ALA 63HIS 64 -0.0001
HIS 64ASP 65 0.1321
ASP 65ARG 66 -0.0003
ARG 66PHE 67 -0.0210
PHE 67GLY 68 -0.0001
GLY 68GLY 69 0.0433
GLY 69TYR 70 -0.0001
TYR 70ALA 71 -0.0245
ALA 71GLN 72 0.0001
GLN 72SER 73 0.0613
SER 73GLY 74 -0.0000
GLY 74LEU 75 -0.0063
LEU 75LEU 76 0.0000
LEU 76ALA 77 0.0330
ALA 77GLU 78 -0.0002
GLU 78ILE 79 0.0237
ILE 79THR 80 -0.0001
THR 80PRO 81 0.0543
PRO 81ASP 82 0.0001
ASP 82LYS 83 -0.0001
LYS 83ALA 84 -0.0004
ALA 84PHE 85 -0.0976
PHE 85GLN 86 0.0001
GLN 86ASP 87 -0.0111
ASP 87LYS 88 0.0001
LYS 88LEU 89 0.0293
LEU 89TYR 90 0.0001
TYR 90PRO 91 -0.0277
PRO 91PHE 92 -0.0000
PHE 92THR 93 -0.0041
THR 93TRP 94 -0.0001
TRP 94ASP 95 0.0086
ASP 95ALA 96 -0.0003
ALA 96VAL 97 0.0387
VAL 97ARG 98 0.0000
ARG 98TYR 99 -0.0037
TYR 99ASN 100 -0.0004
ASN 100GLY 101 0.0162
GLY 101LYS 102 -0.0001
LYS 102LEU 103 -0.0113
LEU 103ILE 104 -0.0000
ILE 104ALA 105 -0.0074
ALA 105TYR 106 -0.0002
TYR 106PRO 107 -0.0052
PRO 107ILE 108 0.0002
ILE 108ALA 109 0.0561
ALA 109VAL 110 0.0000
VAL 110GLU 111 0.1118
GLU 111ALA 112 -0.0001
ALA 112LEU 113 -0.0097
LEU 113SER 114 0.0001
SER 114LEU 115 -0.0197
LEU 115ILE 116 -0.0002
ILE 116TYR 117 -0.0255
TYR 117ASN 118 -0.0002
ASN 118LYS 119 -0.0217
LYS 119ASP 120 0.0001
ASP 120LEU 121 -0.0637
LEU 121LEU 122 0.0002
LEU 122PRO 123 -0.0429
PRO 123ASN 124 0.0000
ASN 124PRO 125 0.0135
PRO 125PRO 126 0.0003
PRO 126LYS 127 0.0250
LYS 127THR 128 0.0001
THR 128TRP 129 0.0388
TRP 129GLU 130 -0.0002
GLU 130GLU 131 -0.0519
GLU 131ILE 132 0.0002
ILE 132PRO 133 0.0244
PRO 133ALA 134 -0.0002
ALA 134LEU 135 0.0247
LEU 135ASP 136 0.0001
ASP 136LYS 137 0.0262
LYS 137GLU 138 0.0002
GLU 138LEU 139 0.0150
LEU 139LYS 140 -0.0001
LYS 140ALA 141 -0.0381
ALA 141LYS 142 -0.0002
LYS 142GLY 143 0.0368
GLY 143LYS 144 -0.0000
LYS 144SER 145 -0.0665
SER 145ALA 146 -0.0001
ALA 146LEU 147 0.0135
LEU 147MET 148 -0.0003
MET 148PHE 149 -0.0537
PHE 149ASN 150 0.0002
ASN 150LEU 151 -0.0506
LEU 151GLN 152 -0.0003
GLN 152GLU 153 0.0527
GLU 153PRO 154 -0.0006
PRO 154TYR 155 0.1146
TYR 155PHE 156 -0.0003
PHE 156THR 157 0.0729
THR 157TRP 158 -0.0002
TRP 158PRO 159 -0.0239
PRO 159LEU 160 0.0003
LEU 160ILE 161 -0.0361
ILE 161ALA 162 -0.0001
ALA 162ALA 163 -0.0809
ALA 163ASP 164 -0.0002
ASP 164GLY 165 -0.1960
GLY 165GLY 166 -0.0001
GLY 166TYR 167 -0.2067
TYR 167ALA 168 0.0000
ALA 168PHE 169 -0.2747
PHE 169LYS 170 -0.0001
LYS 170TYR 171 -0.3356
TYR 171GLU 172 0.0002
GLU 172ASN 173 -0.1709
ASN 173GLY 174 0.0005
GLY 174LYS 175 0.1409
LYS 175TYR 176 0.0000
TYR 176ASP 177 0.0370
ASP 177ILE 178 -0.0000
ILE 178LYS 179 0.0408
LYS 179ASP 180 -0.0002
ASP 180VAL 181 -0.1494
VAL 181GLY 182 0.0004
GLY 182VAL 183 -0.3108
VAL 183ASP 184 0.0002
ASP 184ASN 185 0.0974
ASN 185ALA 186 0.0001
ALA 186GLY 187 0.1035
GLY 187ALA 188 -0.0001
ALA 188LYS 189 0.0187
LYS 189ALA 190 0.0003
ALA 190GLY 191 0.0663
GLY 191LEU 192 -0.0000
LEU 192THR 193 0.0483
THR 193PHE 194 0.0000
PHE 194LEU 195 0.0025
LEU 195VAL 196 -0.0002
VAL 196ASP 197 0.0547
ASP 197LEU 198 0.0001
LEU 198ILE 199 0.0122
ILE 199LYS 200 0.0000
LYS 200ASN 201 -0.0095
ASN 201LYS 202 0.0000
LYS 202HIS 203 0.0514
HIS 203MET 204 -0.0001
MET 204ASN 205 -0.0063
ASN 205ALA 206 -0.0003
ALA 206ASP 207 -0.1060
ASP 207THR 208 -0.0001
THR 208ASP 209 0.1977
ASP 209TYR 210 0.0003
TYR 210SER 211 -0.0296
SER 211ILE 212 0.0002
ILE 212ALA 213 0.0282
ALA 213GLU 214 0.0003
GLU 214ALA 215 0.0736
ALA 215ALA 216 -0.0001
ALA 216PHE 217 -0.0196
PHE 217ASN 218 -0.0000
ASN 218LYS 219 0.1255
LYS 219GLY 220 -0.0001
GLY 220GLU 221 -0.0056
GLU 221THR 222 0.0000
THR 222ALA 223 -0.0042
ALA 223MET 224 -0.0001
MET 224THR 225 -0.0044
THR 225ILE 226 0.0001
ILE 226ASN 227 0.1143
ASN 227GLY 228 0.0003
GLY 228PRO 229 0.1264
PRO 229TRP 230 0.0000
TRP 230ALA 231 -0.0035
ALA 231TRP 232 0.0003
TRP 232SER 233 0.0482
SER 233ASN 234 0.0004
ASN 234ILE 235 -0.0329
ILE 235ASP 236 0.0001
ASP 236THR 237 0.0873
THR 237SER 238 -0.0000
SER 238LYS 239 -0.0166
LYS 239VAL 240 0.0002
VAL 240ASN 241 0.0059
ASN 241TYR 242 0.0001
TYR 242GLY 243 0.1040
GLY 243VAL 244 -0.0001
VAL 244THR 245 0.0628
THR 245VAL 246 0.0003
VAL 246LEU 247 0.0055
LEU 247PRO 248 0.0001
PRO 248THR 249 0.1077
THR 249PHE 250 0.0001
PHE 250LYS 251 0.0271
LYS 251GLY 252 0.0002
GLY 252GLN 253 -0.0512
GLN 253PRO 254 0.0003
PRO 254SER 255 -0.0143
SER 255LYS 256 -0.0001
LYS 256PRO 257 -0.0248
PRO 257PHE 258 -0.0001
PHE 258VAL 259 0.1696
VAL 259GLY 260 -0.0002
GLY 260VAL 261 0.0930
VAL 261LEU 262 -0.0002
LEU 262SER 263 -0.0326
SER 263ALA 264 0.0002
ALA 264GLY 265 -0.0412
GLY 265ILE 266 0.0003
ILE 266ASN 267 0.0069
ASN 267ALA 268 -0.0001
ALA 268ALA 269 0.0378
ALA 269SER 270 -0.0003
SER 270PRO 271 -0.0139
PRO 271ASN 272 0.0002
ASN 272LYS 273 0.0040
LYS 273GLU 274 -0.0001
GLU 274LEU 275 -0.0359
LEU 275ALA 276 0.0001
ALA 276LYS 277 0.0020
LYS 277GLU 278 -0.0001
GLU 278PHE 279 -0.0021
PHE 279LEU 280 -0.0001
LEU 280GLU 281 -0.0297
GLU 281ASN 282 0.0001
ASN 282TYR 283 -0.0502
TYR 283LEU 284 0.0001
LEU 284LEU 285 -0.0397
LEU 285THR 286 0.0003
THR 286ASP 287 0.0749
ASP 287GLU 288 -0.0002
GLU 288GLY 289 -0.0262
GLY 289LEU 290 -0.0001
LEU 290GLU 291 0.0286
GLU 291ALA 292 -0.0000
ALA 292VAL 293 -0.0155
VAL 293ASN 294 -0.0003
ASN 294LYS 295 -0.0261
LYS 295ASP 296 0.0001
ASP 296LYS 297 0.0835
LYS 297PRO 298 0.0002
PRO 298LEU 299 0.0862
LEU 299GLY 300 0.0003
GLY 300ALA 301 0.0779
ALA 301VAL 302 0.0004
VAL 302ALA 303 0.0230
ALA 303LEU 304 -0.0003
LEU 304LYS 305 -0.0174
LYS 305SER 306 0.0002
SER 306TYR 307 -0.0283
TYR 307GLU 308 0.0003
GLU 308GLU 309 -0.0324
GLU 309GLU 310 0.0003
GLU 310LEU 311 0.0316
LEU 311ALA 312 -0.0000
ALA 312LYS 313 -0.0380
LYS 313ASP 314 0.0000
ASP 314PRO 315 0.0114
PRO 315ARG 316 -0.0002
ARG 316ILE 317 0.0873
ILE 317ALA 318 -0.0001
ALA 318ALA 319 -0.0226
ALA 319THR 320 0.0003
THR 320MET 321 -0.0004
MET 321GLU 322 -0.0004
GLU 322ASN 323 0.0257
ASN 323ALA 324 0.0002
ALA 324GLN 325 -0.0689
GLN 325LYS 326 -0.0002
LYS 326GLY 327 -0.0646
GLY 327GLU 328 0.0002
GLU 328ILE 329 0.0220
ILE 329MET 330 -0.0002
MET 330PRO 331 0.0256
PRO 331ASN 332 0.0002
ASN 332ILE 333 0.0427
ILE 333PRO 334 0.0001
PRO 334GLN 335 0.0298
GLN 335MET 336 -0.0000
MET 336SER 337 0.0717
SER 337ALA 338 0.0003
ALA 338PHE 339 -0.0426
PHE 339TRP 340 0.0001
TRP 340TYR 341 -0.0268
TYR 341ALA 342 0.0001
ALA 342VAL 343 -0.0082
VAL 343ARG 344 0.0001
ARG 344THR 345 -0.0111
THR 345ALA 346 -0.0000
ALA 346VAL 347 -0.0779
VAL 347ILE 348 -0.0000
ILE 348ASN 349 -0.0831
ASN 349ALA 350 -0.0001
ALA 350ALA 351 -0.1676
ALA 351SER 352 0.0001
SER 352GLY 353 -0.0880
GLY 353ARG 354 0.0002
ARG 354GLN 355 -0.0331
GLN 355THR 356 0.0001
THR 356VAL 357 0.0714
VAL 357ASP 358 0.0001
ASP 358GLU 359 0.0701
GLU 359ALA 360 0.0003
ALA 360LEU 361 -0.0534
LEU 361LYS 362 0.0001
LYS 362ASP 363 0.0547
ASP 363ALA 364 -0.0000
ALA 364GLN 365 -0.1345
GLN 365THR 366 0.0003
THR 366ARG 367 -0.0291
ARG 367ILE 368 -0.0004
ILE 368THR 369 -0.0972
THR 369LYS 370 -0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.