CNRS Nantes University US2B US2B
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***  UBIQUITIN  ***

CA strain for 2405231012312834919

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1GLN 2 0.1761
GLN 2ILE 3 0.0590
ILE 3PHE 4 0.1362
PHE 4VAL 5 0.1928
VAL 5LYS 6 0.0070
LYS 6THR 7 0.2675
THR 7LEU 8 0.0315
LEU 8THR 9 -0.1465
THR 9GLY 10 0.1301
GLY 10LYS 11 0.0940
LYS 11THR 12 0.1118
THR 12ILE 13 0.0097
ILE 13THR 14 0.1316
THR 14LEU 15 0.1257
LEU 15GLU 16 0.0740
GLU 16VAL 17 0.0992
VAL 17GLU 18 0.1682
GLU 18PRO 19 -0.0023
PRO 19SER 20 -0.0020
SER 20ASP 21 -0.0697
ASP 21THR 22 -0.0278
THR 22ILE 23 -0.0696
ILE 23GLU 24 -0.0233
GLU 24ASN 25 -0.0715
ASN 25VAL 26 -0.0019
VAL 26LYS 27 -0.2643
LYS 27ALA 28 0.1145
ALA 28LYS 29 -0.3288
LYS 29ILE 30 0.0180
ILE 30GLN 31 -0.0763
GLN 31ASP 32 -0.0404
ASP 32LYS 33 -0.1555
LYS 33GLU 34 -0.0050
GLU 34GLY 35 -0.0499
GLY 35ILE 36 -0.0597
ILE 36PRO 37 0.1066
PRO 37PRO 38 -0.0639
PRO 38ASP 39 -0.2993
ASP 39GLN 40 0.0087
GLN 40GLN 41 0.1641
GLN 41ARG 42 0.1870
ARG 42LEU 43 0.2579
LEU 43ILE 44 0.0245
ILE 44PHE 45 0.3915
PHE 45ALA 46 -0.0551
ALA 46GLY 47 -0.0349
GLY 47LYS 48 0.0050
LYS 48GLN 49 0.2574
GLN 49LEU 50 0.1328
LEU 50GLU 51 -0.1512
GLU 51ASP 52 0.1453
ASP 52GLY 53 -0.2395
GLY 53ARG 54 -0.0026
ARG 54THR 55 -0.0065
THR 55LEU 56 -0.0319
LEU 56SER 57 -0.0139
SER 57ASP 58 0.0107
ASP 58TYR 59 -0.0202
TYR 59ASN 60 0.1070
ASN 60ILE 61 -0.0353
ILE 61GLN 62 0.0273
GLN 62LYS 63 -0.0100
LYS 63GLU 64 0.0694
GLU 64SER 65 0.0077
SER 65THR 66 0.2653
THR 66LEU 67 0.1055
LEU 67HIS 68 0.2997
HIS 68LEU 69 0.3040
LEU 69VAL 70 0.2528
VAL 70LEU 71 0.5575
LEU 71ARG 72 0.4008
ARG 72LEU 73 0.1772
LEU 73ARG 74 1.3568
ARG 74GLY 75 -0.0754
GLY 75GLY 76 -0.3019

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.