This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASP 1
ALA 2
-0.1436
ALA 2
GLU 3
0.1113
GLU 3
PHE 4
-0.0217
PHE 4
ARG 5
-0.0415
ARG 5
HIS 6
-0.0739
HIS 6
ASP 7
0.0449
ASP 7
SER 8
-0.0462
SER 8
GLY 9
0.0447
GLY 9
TYR 10
0.2943
TYR 10
GLU 11
-0.1227
GLU 11
VAL 12
-0.0432
VAL 12
HIS 13
-0.1674
HIS 13
HIS 14
0.3118
HIS 14
GLN 15
-0.0863
GLN 15
LYS 16
0.1331
LYS 16
LEU 17
-0.0026
LEU 17
VAL 18
-0.0129
VAL 18
PHE 19
0.0789
PHE 19
PHE 20
0.0858
PHE 20
ALA 21
-0.1780
ALA 21
GLU 22
0.4183
GLU 22
ASP 23
-0.0372
ASP 23
VAL 24
-0.0855
VAL 24
GLY 25
-0.0928
GLY 25
SER 26
-0.1458
SER 26
ASN 27
0.0196
ASN 27
LYS 28
0.0258
LYS 28
GLY 29
-0.0493
GLY 29
ALA 30
-0.0974
ALA 30
ILE 31
0.1077
ILE 31
ILE 32
0.2371
ILE 32
GLY 33
0.1826
GLY 33
LEU 34
-0.0985
LEU 34
MET 35
0.0038
MET 35
VAL 36
0.0429
VAL 36
GLY 37
0.2765
GLY 37
GLY 38
0.0038
GLY 38
VAL 39
0.2358
VAL 39
VAL 40
-0.0655
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elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.