CNRS Nantes University US2B US2B
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***  conf_2  ***

CA strain for 2404230347251977942

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1ALA 2 -0.0410
ALA 2GLU 3 -0.0706
GLU 3PHE 4 0.0486
PHE 4ARG 5 0.0624
ARG 5HIS 6 -0.3528
HIS 6ASP 7 -0.0007
ASP 7SER 8 -0.0905
SER 8GLY 9 0.0940
GLY 9TYR 10 -0.0627
TYR 10GLU 11 0.0440
GLU 11VAL 12 0.0877
VAL 12HIS 13 0.0952
HIS 13HIS 14 0.1218
HIS 14GLN 15 0.0393
GLN 15LYS 16 0.1139
LYS 16LEU 17 0.0180
LEU 17VAL 18 0.2930
VAL 18PHE 19 0.0160
PHE 19PHE 20 -0.1565
PHE 20ALA 21 0.5351
ALA 21GLU 22 -0.2477
GLU 22ASP 23 -0.0225
ASP 23VAL 24 0.1579
VAL 24GLY 25 -0.1016
GLY 25SER 26 0.1878
SER 26ASN 27 -0.0072
ASN 27LYS 28 -0.0610
LYS 28GLY 29 -0.0153
GLY 29ALA 30 0.0058
ALA 30ILE 31 -0.1259
ILE 31ILE 32 0.0126
ILE 32GLY 33 0.2577
GLY 33LEU 34 -0.3835
LEU 34MET 35 0.2065
MET 35VAL 36 -0.0283
VAL 36GLY 37 0.2772
GLY 37GLY 38 0.1742
GLY 38VAL 39 0.1168
VAL 39VAL 40 -0.0286

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.